Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,150,651 G→C 5.1% noncoding (291/373 nt) PP_mr28 ← rne‑II regulatory region

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,150,6510GC 5.1% 370.2 / 7.9 117noncoding (291/373 nt)PP_mr28rne‑II regulatory region
Reads supporting (aligned to +/- strand):  ref base G (60/49);  new base C (3/3);  total (64/53)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.12e-01

Only 100 of 120 total aligned reads displayed.

GTCCACCAGGGCTACACGCAACTCTTCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAACCAAGCGGGCCTTGTGCACT  >  NC_002947/2150503‑2150798
                                                                                                                                                    |                                                                                                                                                   
gTCCACCAGGGCTACACGCAACTCTTCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCgg                                                                                                                                                    <  2:420649/150‑1 (MQ=255)
       aGGGCTACACGCAACTCTTCGGGTTGAGTCGCGTTAATGAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCAccc                                                                                                                                             >  2:1350616/1‑150 (MQ=255)
       aGGGCTACACGCAACTCTTCGGCCAGCGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCAccc                                                                                                                                             <  2:1123972/150‑1 (MQ=255)
              cacGCAACTCTTCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACCTCTCATGGTAGGTCTGATAATTCTTAAAGGGTGGCCGGGCCACCCCCATGTc                                                                                                                                      >  2:776377/1‑150 (MQ=255)
               acGCAACTCTTCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCg                                                                                                                                     >  1:329841/1‑150 (MQ=255)
                cGCAACTCTTCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGa                                                                                                                                    <  2:329841/150‑1 (MQ=255)
                 gCAACTCTTCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCg                                                                                                                                                     <  2:1567887/132‑1 (MQ=255)
                 gCAACTCTTCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCg                                                                                                                                                     >  1:1567887/1‑132 (MQ=255)
                 gCAACTCTTCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAg                                                                                                                                   >  1:10668/1‑150 (MQ=255)
                      tctTCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGAc                                                                                                                               <  1:1243785/149‑1 (MQ=255)
                      tctTCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGAc                                                                                                                               >  2:1243785/1‑149 (MQ=255)
                        ttCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGtt                                                                                                                            >  1:729221/1‑150 (MQ=255)
                        ttCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTCTCCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGtt                                                                                                                            >  1:612781/1‑150 (MQ=255)
                             gTTGAGTCGCGTTAATCAGCATTCTTTTCTTGTTGTACCGTCGGCTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCTGGCCACCCCCGTGTCGAGCGACGTTCGGCa                                                                                                                       >  1:766227/1‑150 (MQ=255)
                             gTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGa                                                                                                                                    >  1:975724/1‑137 (MQ=255)
                             gTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGa                                                                                                                                    <  2:975724/137‑1 (MQ=255)
                             gTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCa                                                                                                                       >  1:1843498/1‑150 (MQ=255)
                             gTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCa                                                                                                                       >  1:1347465/1‑150 (MQ=255)
                             gTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCa                                                                                                                       >  1:476400/1‑150 (MQ=255)
                              ttGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCCTCCATTTCCGGGCTGCCGGAAACGTCGTTCGGCACGCACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCAc                                                                                                                      <  2:1430585/150‑1 (MQ=255)
                                gAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCa                                                                                                                    <  2:1944637/150‑1 (MQ=255)
                                 aGTCGCGTTCCTCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCTGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAg                                                                                                                   >  2:1737484/1‑150 (MQ=255)
                                    cgcgTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCg                                                                                                                <  2:2308575/150‑1 (MQ=255)
                                     gcgTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCgg                                                                                                               <  1:1350616/150‑1 (MQ=255)
                                      cgTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGt                                                                                                              >  2:1945227/1‑150 (MQ=255)
                                       gTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGtt                                                                                                             <  2:1235699/150‑1 (MQ=255)
                                        ttAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTg                                                                                                            >  2:1482026/1‑150 (MQ=255)
                                        ttAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCAGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCAGCACCGGCCGGTTg                                                                                                            >  2:706520/1‑150 (MQ=255)
                                          aaTCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGAGCAAAAGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGcc                                                                                                          <  1:292407/150‑1 (MQ=255)
                                             cAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACTAAGTCTCGTTTTCTGGTCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAg                                                                                                       >  2:1834050/1‑150 (MQ=255)
                                              aGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGc                                                                                                      >  1:1660049/1‑150 (MQ=255)
                                              aGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGc                                                                                                      >  1:1107641/1‑150 (MQ=255)
                                              aGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGAGGGCCCGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGc                                                                                                      <  1:1813775/150‑1 (MQ=255)
                                               gCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCAccccc                                                                                                                                           <  1:2064548/112‑1 (MQ=255)
                                               gCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCAccccc                                                                                                                                           >  2:2064548/1‑112 (MQ=255)
                                                cATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCt                                                                                                    >  2:1758651/1‑150 (MQ=255)
                                                cATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCt                                                                                                    >  2:47304/1‑150 (MQ=255)
                                                 aTTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTg                                                                                                   >  1:225050/1‑150 (MQ=255)
                                                  ttCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGc                                                                                                  >  2:40502/1‑150 (MQ=255)
                                                  ttCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGc                                                                                                  >  1:506977/1‑150 (MQ=255)
                                                    cTTTTCACGTTGTACCGTCGGTTTCCCGGATGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCg                                                                                                <  1:489281/150‑1 (MQ=255)
                                                      tttCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGtt                                                                                              >  1:465264/1‑150 (MQ=255)
                                                           tgttgtACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCCGGCCAcccttt                                                                                                                                          <  2:97210/101‑4 (MQ=255)
                                                                     tCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGTCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGt                                                                               >  1:746336/1‑150 (MQ=255)
                                                                        gTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGtt                                                                                              <  1:998830/132‑1 (MQ=255)
                                                                        gTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCt                                                                            <  1:1482026/150‑1 (MQ=255)
                                                                         tttCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCTAAAGGGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTg                                                                           <  1:614774/150‑1 (MQ=255)
                                                                          ttCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGt                                                                          <  1:1945227/150‑1 (MQ=255)
                                                                            ccGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGttt                                                                        <  2:1978223/150‑1 (MQ=255)
                                                                                gCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAATGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTTTCGCGACGACGCGTCCTGTTtgctg                                                                    <  1:315968/150‑1 (MQ=255)
                                                                                  tGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCg                                                                  >  2:1507535/1‑150 (MQ=255)
                                                                                     cGGAAACGGCGTTCGGCACACACGACGTCTCATGGCCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTg                                                               >  1:187333/1‑150 (MQ=255)
                                                                                       gAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGcc                                                             <  1:47304/150‑1 (MQ=255)
                                                                                       gAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGc                                                              <  1:1568286/149‑1 (MQ=255)
                                                                                       gAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGc                                                              >  2:1568286/1‑149 (MQ=255)
                                                                                         aaCGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCcaa                                                           >  1:1515216/1‑150 (MQ=255)
                                                                                           cGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGtt                                                                         >  2:563114/1‑134 (MQ=255)
                                                                                            ggCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCcaacaa                                                        <  2:10668/150‑1 (MQ=255)
                                                                                            ggCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCcaacaa                                                        >  2:884683/1‑150 (MQ=255)
                                                                                                       cacacGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTgg                                             <  1:2317422/150‑1 (MQ=255)
                                                                                                        acacGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGAcgc                                                                                 <  1:1363719/113‑1 (MQ=255)
                                                                                                        acacGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGAcgc                                                                                 >  2:1363719/1‑113 (MQ=255)
                                                                                                        acacGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGc                                            >  1:827220/1‑150 (MQ=255)
                                                                                                          acgacgTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGcgac                                                                                      <  1:168673/106‑1 (MQ=255)
                                                                                                          acgacgTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGcgac                                                                                      >  2:168673/1‑106 (MQ=255)
                                                                                                          acgacgTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGtt                                                                         >  1:2071734/1‑119 (MQ=255)
                                                                                                          acgacgTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGtt                                                                         <  2:2071734/119‑1 (MQ=255)
                                                                                                                tctcATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATa                                    >  1:2069706/1‑150 (MQ=255)
                                                                                                                 ctcATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAg                                   <  2:2069706/150‑1 (MQ=255)
                                                                                                                  tcATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAgg                                  >  2:1838503/1‑150 (MQ=255)
                                                                                                                  tcATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAgg                                  >  1:1473870/1‑150 (MQ=255)
                                                                                                                   cATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTc                                                                                                                           >  1:11039/1‑60 (MQ=255)
                                                                                                                   cATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTc                                                                                                                           <  2:11039/60‑1 (MQ=255)
                                                                                                                    aTGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTg                                                                                             <  2:710692/89‑1 (MQ=255)
                                                                                                                       gTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCg                                                                                                                >  1:1804211/1‑67 (MQ=255)
                                                                                                                       gTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCg                                                                                                                <  2:1804211/67‑1 (MQ=255)
                                                                                                                       gTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATcc                             >  2:920023/1‑150 (MQ=255)
                                                                                                                         cGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGa                           >  1:202810/1‑150 (MQ=255)
                                                                                                                          ggTGCCAAGGTGCGCAAAGGGTGGCCGGGCCCCCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGaa                          <  1:759773/150‑1 (MQ=255)
                                                                                                                            tGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCAGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATc                        <  1:706520/150‑1 (MQ=255)
                                                                                                                              ccAAGGTGCGCAAAGGGTGGCCGGGCCACACCTGATTCGTGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCaa                      <  2:187333/150‑1 (MQ=255)
                                                                                                                               cAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGt                                                                                                              >  2:169547/1‑61 (MQ=255)
                                                                                                                               cAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGt                                                                                                              <  1:169547/61‑1 (MQ=255)
                                                                                                                               cAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAAc                     <  2:1660049/150‑1 (MQ=255)
                                                                                                                               cAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAAc                     >  2:102620/1‑150 (MQ=255)
                                                                                                                               cAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAAc                     >  1:1149240/1‑150 (MQ=255)
                                                                                                                               cAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAAc                     <  2:729221/150‑1 (MQ=255)
                                                                                                                                  ggTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAACCaa                  <  1:1466931/150‑1 (MQ=255)
                                                                                                                                      acacgggggTGGCCCGGCCACCCTCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCCGTGGCTTCGAATAGGTATCCGAATCAACCAAGCgg              >  2:906885/7‑150 (MQ=255)
                                                                                                                                       tactcgggTGGCCCGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAACCAAGCggg             >  1:672235/6‑150 (MQ=255)
                                                                                                                                       gcAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAACCAAGCggg             >  2:1935246/1‑150 (MQ=255)
                                                                                                                                          aaGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAACCAAGCGGGCCt          <  1:1507535/150‑1 (MQ=255)
                                                                                                                                             ggTGGCCTGGCCACCCCCGTGTCGAGCGACTGTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGGGGCTTCGAATAGTTATCCGAATCAACCAAGCGGGCCTtgt       <  1:64336/150‑1 (MQ=255)
                                                                                                                                             ggTGGCCCGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAACCAAGCGGGCCTtgt       <  2:672235/150‑1 (MQ=255)
                                                                                                                                               tGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGt                                 >  1:112359/1‑122 (MQ=255)
                                                                                                                                               tGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGt                                 <  2:112359/122‑1 (MQ=255)
                                                                                                                                                ggCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGaa                          <  1:1303821/128‑1 (MQ=255)
                                                                                                                                                ggCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGaa                          >  2:1303821/1‑128 (MQ=255)
                                                                                                                                                 gCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAACCAAGCGGGCCTTGTGCAc   <  2:2104985/150‑1 (MQ=255)
                                                                                                                                                  ccGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAACCAAGCGGGCCTTGTGCACt  >  1:1752660/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GTCCACCAGGGCTACACGCAACTCTTCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAACCAAGCGGGCCTTGTGCACT  >  NC_002947/2150503‑2150798

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: