BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,392,660	C→G	7.0%	I382M (ATC→ATG)	PP_2097 →	sensory box protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,392,660	0	C	G	7.0%	337.4 / 12.0	109	I382M (ATC→ATG)	PP_2097	sensory box protein
Reads supporting (aligned to +/- strand): ref base C (58/43); new base G (5/3); total (63/46)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 113 total aligned reads displayed.

CTGCTCTACAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGCCCAGGCCTTGA  >  NC_002947/2392514‑2392808

ctgctCTACAGCCTGCTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCTGTTGTTGCGTGGCAACCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGa‑tgatc                                                                                                                                                   <  2:339689/150‑1 (MQ=255)

 tgctCTACAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TGATCg                                                                                                                                                  >  2:384579/1‑150 (MQ=255)

    tctACAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGcca                                                                                                                                               <  1:896896/150‑1 (MQ=255)

    tctACAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGcca                                                                                                                                               >  2:2292003/1‑150 (MQ=255)

        cAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TGATCGccacctg                                                                                                                                           <  1:384579/150‑3 (MQ=255)

          gCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAAcc                                                                                                                                         >  2:296732/1‑150 (MQ=255)

           ccTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCt                                                                                                                                        >  1:2099138/1‑150 (MQ=255)

            cTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTc                                                                                                                                       >  2:2293499/1‑150 (MQ=255)

                tCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAgg                                                                                                                                   >  2:1507737/1‑150 (MQ=255)

                  agccagcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAgggg                                                                                                                                 >  2:1589807/1‑150 (MQ=255)

                  agccagcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAgggg                                                                                                                                 <  2:2099138/150‑1 (MQ=255)

                  agccagcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAgggg                                                                                                                                 <  1:129119/150‑1 (MQ=255)

                  agccagcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAgggg                                                                                                                                 <  2:412527/150‑1 (MQ=255)

                    ccagcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TGATCGccacc                                                                                                                                             <  2:1715455/136‑1 (MQ=255)

                    ccagcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TGATCGccacc                                                                                                                                             >  1:1715455/1‑136 (MQ=255)

                    ccagcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGggt                                                                                                                               >  1:2055677/1‑150 (MQ=255)

                     cagcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGggtg                                                                                                                              <  2:518758/150‑1 (MQ=255)

                      agcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAAc                                                                                                                                          >  1:106119/1‑137 (MQ=255)

                      agcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGggtgg                                                                                                                             >  1:344448/1‑150 (MQ=255)

                       gcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGggtggt                                                                                                                            >  2:1755121/1‑150 (MQ=255)

                        cGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTc                                                                                                                           <  1:195263/150‑1 (MQ=255)

                            aGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGGGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑CCATCGCCACCAACCTCAAGGGggtgg                                                                                                                             <  1:754118/144‑1 (MQ=255)

                            aGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGGGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑CCATCGCCACCAACCTCAAGGGggtgg                                                                                                                             >  2:754118/1‑144 (MQ=255)

                            aGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCa                                                                                                                       <  2:2055677/150‑1 (MQ=255)

                                    ctggccctggTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAAc                                                                                                               >  1:1658457/1‑150 (MQ=255)

                                     tggccctggTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACg                                                                                                              >  2:1024774/1‑150 (MQ=255)

                                      ggccctggTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGc                                                                                                             <  1:1024774/150‑1 (MQ=255)

                                       gccctggTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCTCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGcc                                                                                                            >  1:512600/1‑150 (MQ=255)

                                         cctggTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTACTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCgg                                                                                                          >  1:999806/1‑150 (MQ=255)

                                         catattCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTTAACGCCgg                                                                                                          >  1:1615855/6‑150 (MQ=255)

                                          ctggTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGt                                                                                                         >  1:937028/1‑150 (MQ=255)

                                             gTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAACAGTCGTTGCGTGGCACCCACAACAAACTGCGCAGTGTGCTGGAGGCGGCGACCCAGGTGGCGA‑TCATCGCAACCAACCACAAGGGGGTGGTCAGCACGTTCAACGCCGGTGcc                                                                                                      >  2:539116/1‑150 (MQ=255)

                                                 gtgaGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGAACGTTCAACGCCGGTGCCGAAc                                                                                                  <  2:1962768/147‑1 (MQ=255)

                                                 cTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCTAAc                                                                                                  <  2:2025759/150‑1 (MQ=255)

                                                 cTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGCAc                                                                                                  >  1:505869/1‑150 (MQ=255)

                                                  tCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACg                                                                                                 >  1:773159/1‑150 (MQ=255)

                                                    aGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAgg                                                                                                                                   <  1:137970/114‑1 (MQ=255)

                                                    aGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAgg                                                                                                                                   >  2:137970/1‑114 (MQ=255)

                                                        tACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCt                                                                                           >  1:1201563/1‑150 (MQ=255)

                                                           tGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCGACCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCTGGT‑ACGATTGATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACAGCGCTGACGAACGCATGCTCgg                                                                                        >  1:1896291/1‑150 (MQ=255)

                                                           tGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCTACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGtt                                                                                                                   <  1:285684/123‑1 (MQ=255)

                                                           tGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGtt                                                                                                                   >  2:285684/1‑123 (MQ=255)

                                                            gCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGt                                                                                       <  1:296732/150‑1 (MQ=255)

                                                            gCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGt                                                                                       >  1:192126/1‑150 (MQ=255)

                                                             ccGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGggtg                                                                                                                              <  2:1987143/110‑1 (MQ=255)

                                                                 gTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTAcgc                                                                                  <  2:1328121/150‑1 (MQ=255)

                                                                       ggTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCCGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCag                                                                            >  2:357934/1‑150 (MQ=255)

                                                                       ggTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCa                                                                                                                                      >  1:158391/1‑92 (MQ=255)

                                                                       ggTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCag                                                                            >  2:1387556/1‑150 (MQ=255)

                                                                        gTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCagc                                                                           >  2:1794016/1‑150 (MQ=255)

                                                                         tCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TGATCGccacctgg                                                                                                                                          <  2:1788270/86‑4 (MQ=255)

                                                                         tCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TGATCGccacctgg                                                                                                                                          >  1:1788270/1‑83 (MQ=255)

                                                                           aGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCagcgaa                                                                        <  2:773159/150‑1 (MQ=255)

                                                                           aGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCAGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCagcgaa                                                                        >  1:529434/1‑150 (MQ=255)

                                                                                gCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGAt                                                                   <  2:860926/150‑1 (MQ=255)

                                                                                      gTTGCGTGGCACCCACAACCAACTGCGCAGTGTCCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCg                                                             <  2:2299884/150‑1 (MQ=255)

                                                                                               cACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCt                                                    <  2:937028/150‑1 (MQ=255)

                                                                                                  ccACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCg                                                                 >  2:786807/1‑134 (MQ=255)

                                                                                                  ccACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGa                                                 >  1:817111/1‑150 (MQ=255)

                                                                                                  ccACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGa                                                 >  1:1275090/1‑150 (MQ=255)

                                                                                                   cacaACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGaa                                                >  2:219442/1‑150 (MQ=255)

                                                                                                    acaACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGc                                                                                                             >  2:981933/1‑88 (MQ=255)

                                                                                                    acaACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGc                                                                                                             <  1:981933/88‑1 (MQ=255)

                                                                                                    acaACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGCAg                                               <  1:2333753/150‑1 (MQ=255)

                                                                                                      aaccaacTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTTAGCCTTGAAggc                                             >  2:360132/1‑148 (MQ=255)

                                                                                                      aaccaacTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGAc                                             >  2:1909081/1‑150 (MQ=255)

                                                                                                       accaacTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGAcc                                            <  2:1658457/150‑1 (MQ=255)

                                                                                                       accaacTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCCGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGAcc                                            <  2:435011/150‑1 (MQ=255)

                                                                                                          aacTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTAAGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTgg                                         <  1:1220294/150‑1 (MQ=255)

                                                                                                                gcAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGc                                                                                                                        <  2:67736/65‑1 (MQ=255)

                                                                                                                gcAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGc                                                                                                                        >  1:67736/1‑65 (MQ=255)

                                                                                                                gcAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGc                                   <  1:2292003/150‑1 (MQ=255)

                                                                                                                gcAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGc                                   <  1:1909081/150‑1 (MQ=255)

                                                                                                                  aGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCCAAAGACAATGACTTCCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTATTGCCg                                 >  2:1153327/1‑150 (MQ=255)

                                                                                                                    tgtgCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCgga                               >  1:189624/1‑150 (MQ=255)

                                                                                                                      tgCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCggagg                             <  1:1507737/150‑1 (MQ=255)

                                                                                                                       gctttaTGCCGCGACCAAGGTTGCGA‑TCATCGCCAACAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAACGATCGGCCGGTTGCGCCGTGGAGACCTGGTACTGCCggagga                            >  2:336294/6‑150 (MQ=255)

                                                                                                                        cTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGgaggag                           >  2:1052521/1‑150 (MQ=255)

                                                                                                                        cTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGgaggag                           >  1:2172556/1‑150 (MQ=255)

                                                                                                                           gATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTAc                                      <  2:563172/136‑1 (MQ=255)

                                                                                                                           gATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTAc                                      >  1:563172/1‑136 (MQ=255)

                                                                                                                           gATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTg                        >  1:667032/1‑150 (MQ=255)

                                                                                                                           gATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGCCCGGTCGCGCCTTGCAGAACTGCTAATGTCGCATGCGCTg                        <  2:1201563/150‑1 (MQ=255)

                                                                                                                              gCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGAGACTGTGCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAAc                     >  1:252917/1‑150 (MQ=255)

                                                                                                                                cgcgACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCt                   >  1:1462007/1‑150 (MQ=255)

                                                                                                                                  cgACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGc                 <  1:2293499/150‑1 (MQ=255)

                                                                                                                                  cgACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGc                 <  2:2055842/150‑1 (MQ=255)

                                                                                                                                   gACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCg                >  1:751891/1‑150 (MQ=255)

                                                                                                                                      ccAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGc             >  1:1181263/1‑150 (MQ=255)

                                                                                                                                       cAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGcc            <  1:2185606/150‑1 (MQ=255)

                                                                                                                                        aGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGAt                                                                   <  2:1413756/94‑1 (MQ=255)

                                                                                                                                         ggTGGCGA‑TGATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGCCCa          >  1:1975727/1‑150 (MQ=255)

                                                                                                                                             gCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGGTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGCCCAGGcc      >  2:1498100/1‑150 (MQ=255)

                                                                                                                                               gA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAg                                               <  1:1817252/107‑1 (MQ=255)

                                                                                                                                               gA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAg                                               >  2:1817252/1‑107 (MQ=255)

                                                                                                                                               gA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGCCCAGGCCtt    >  1:595872/1‑150 (MQ=255)

                                                                                                                                               gA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTACCGGAGGAGCTGAACCTGCGTGCCCAGGCCtt    >  1:2002922/1‑150 (MQ=255)

                                                                                                                                                a‑tcatcGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTg                                          >  1:1769993/1‑111 (MQ=255)

                                                                                                                                                a‑tcatcGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTg                                          <  2:1769993/111‑1 (MQ=255)

                                                                                                                                                  tcatcGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGCCCAGGCCTTGa  <  1:1589807/150‑1 (MQ=255)

CTGCTCTACAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGA‑TCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGCCCAGGCCTTGA  >  NC_002947/2392514‑2392808

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`