| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,456,828 | G→A | 7.1% | intergenic (+36/‑145) | gapB → / → PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,456,828 | 0 | G | A | 7.1% | 289.0 / 8.6 | 99 | intergenic (+36/‑145) | gapB/PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Reads supporting (aligned to +/- strand): ref base G (49/42); new base A (2/5); total (51/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.04e-01 | |||||||||||
Only 100 of 104 total aligned reads displayed.
GACAACCGCGTTGTTCTGTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGC > NC_002947/2456679‑2456976 | gACAACCGCGTTGTTCTGTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCg < 2:84978/150‑1 (MQ=255) aCAACCGCGTTGTTCTGTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCgg < 1:1945875/150‑1 (MQ=255) aCAACCGCGTTGTTCTGTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCgg < 2:1459989/150‑1 (MQ=255) aaCCGCGTTGTTCTGTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGt > 2:1494691/1‑150 (MQ=255) ttgtgCTGTACGTCGGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTTGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑tt < 2:77944/150‑1 (MQ=255) tgttCTGTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑ttt < 1:918832/150‑1 (MQ=255) tgttCTGTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCCGAAGGTTCCCG‑ttt < 2:1008234/150‑1 (MQ=255) gttCTGTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑tttt > 1:468300/1‑150 (MQ=255) gttCTGTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑tttt < 1:1388692/150‑1 (MQ=255) gttCTGTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCCGAAGGTTCCCG‑tttt < 2:1543766/150‑1 (MQ=255) ttCTGTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑ttttt > 1:2315406/1‑150 (MQ=255) cTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTg < 1:2243499/150‑1 (MQ=255) gTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAAt > 2:1266068/1‑150 (MQ=255) cGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAAtgtg > 2:694189/1‑150 (MQ=255) gACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAAtgtgt < 2:1385825/150‑1 (MQ=255) aCAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAAtgtgtg < 1:1494691/150‑1 (MQ=255) aaCGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGtgtt > 2:1472280/1‑150 (MQ=255) aCGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCg < 2:1357486/116‑1 (MQ=255) aCGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCg > 1:1357486/1‑116 (MQ=255) gAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTc > 1:646951/1‑150 (MQ=255) aaTTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCa < 2:2310554/150‑1 (MQ=255) ttCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGt < 1:1472280/150‑1 (MQ=255) taGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGccc < 2:1637196/150‑1 (MQ=255) ccAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCACAATTCCCACCAAGATTGGCATGTCCTGCTCCAGAACTTTTTCCACCTCGTCGTTTCGT‑TTTGTTTTTATTCTTAATGTGTGTTGTCAGTGCCGGCCCTTTcgc < 2:1433422/150‑1 (MQ=255) aGGTGGTTCGGGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGG < 2:2315406‑M1/150‑1 (MQ=255) ggtggtTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGG < 2:359694‑M1/150‑1 (MQ=255) gtggtTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGT > 2:1754157‑M1/1‑150 (MQ=255) gtggtTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGT > 2:1424221‑M1/1‑150 (MQ=255) gtggtTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGT > 2:422068‑M1/1‑150 (MQ=255) tggtTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTA < 2:47621‑M1/150‑1 (MQ=255) tCGTGTGATGGAAGACATGGCTGGTGTGAACTCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACC < 1:1679741‑M1/150‑1 (MQ=255) gATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTT > 2:2284798‑M1/1‑132 (MQ=255) gATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTT < 1:2284798‑M1/132‑1 (MQ=255) aTGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGTCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGtgttgt < 1:2244601/116‑1 (MQ=255) aTGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGTCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGtgttgt > 2:2244601/1‑116 (MQ=255) aaGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAG < 1:694189‑M1/150‑1 (MQ=255) aTGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGtt < 1:261563/76‑1 (MQ=255) aTGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGtt > 2:261563/1‑76 (MQ=255) cTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAAtgtgt < 2:52649/98‑1 (MQ=255) cTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAAtgtgt > 1:52649/1‑98 (MQ=255) tgtgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGcc > 1:702373/1‑150 (MQ=255) gtgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCA‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCc < 2:1658840‑M2/150‑2 (MQ=255) gAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTg > 2:1821485/1‑145 (MQ=255) gAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTg < 1:1821485/145‑1 (MQ=255) cccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAACACGTGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCcctgta > 1:1424221‑M2/1‑144 (MQ=255) ccGCCAGCGTTTCCACGTTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCcctgtag > 1:2055375‑M2/1‑143 (MQ=255) ccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCcctgtag < 1:2233110‑M2/150‑8 (MQ=255) cAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGggcagcgataatcctgtaggagc > 2:1149621‑M1/1‑127 (MQ=255) cAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGggcagcgataatcctgtaggagc < 1:422068‑M1/150‑24 (MQ=255) aGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGG > 2:1976894‑M1/1‑126 (MQ=255) aGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGG < 1:1976894‑M1/126‑1 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCcctgtaggagcgg > 1:1040565‑M2/1‑137 (MQ=255) cGTTTCCACGCTGATTCGCTTGTAAGGTAATGAAAAAACGGGAACGTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGGCCTTTCGTGGGTAAACCCGCTCCTACAGGATTATCGCTGCCcctgtaggagcggg > 1:620096‑M2/1‑136 (MQ=255) cGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCcctgtaggagcggg > 2:702373‑M2/1‑136 (MQ=255) cGTTTCCACGCGGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCcctgtaggagcggg > 1:1266068‑M2/1‑136 (MQ=255) gTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCcctgtaggagcgggt > 2:1826697‑M2/1‑135 (MQ=255) ccACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCA‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCcctgtaggagcgggtttac > 1:1658840‑M2/1‑131 (MQ=255) aCGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCcctgtaggagcgggtttaccc > 2:2233110‑M2/1‑129 (MQ=255) cGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC > 1:1689297‑M1/1‑109 (MQ=255) cGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC < 2:1689297‑M1/109‑1 (MQ=255) gCTGATTCGCTTGTAAGGCAATGAAAAACCGGGAACCTTCGGGTTCCCGTTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA < 1:1898538‑M1/112‑1 (MQ=255) gCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA > 2:1898538‑M1/1‑112 (MQ=255) gCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATcctgtaggagcgggtttacccgc < 1:1530592‑M2/150‑24 (MQ=255) gCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCcctgtaggagcgggtttacccgc > 2:468300‑M2/1‑127 (MQ=255) aTTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATcctgtaggagcgggtttacccgcgaaa > 2:1530592‑M2/1‑123 (MQ=255) aTTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGG > 2:261251‑M1/1‑92 (MQ=255) aTTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGG < 1:261251‑M1/92‑1 (MQ=255) ttCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCcctgtaggagcg < 2:2279092‑M2/134‑13 (MQ=255) ttCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCcctgtaggagcg > 1:2279092‑M2/1‑122 (MQ=255) gCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCCGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGc < 2:1802985/150‑1 (MQ=255) cTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGcc < 1:1754157/150‑1 (MQ=255) ttGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATcctgtaggagcgggtttacccgcgaaagggccg > 1:1149621‑M2/1‑117 (MQ=255) gTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCcctgtaggagcgggtttac > 2:1436017‑M2/1‑115 (MQ=255) gTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCcctgtaggagcgggtttac < 1:1436017‑M2/134‑20 (MQ=255) tagggCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCa > 1:2329793/4‑150 (MQ=255) aGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGTCCTTTCGCGGGTAAACCATCTCCTACAAGTTTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGGATAGGGCAGCAcc > 2:1088156/1‑150 (MQ=255) ggCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCg < 2:800949/150‑1 (MQ=255) cAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGc > 1:1899586/1‑150 (MQ=255) aaaaaaacGGGAACCCGAAGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCcctgtaggagcgggtttacccgcgaa < 1:1158626‑M2/130‑27 (MQ=255) aaaaaaacGGGAACCCGAAGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCcctgtaggagcgggtttacccgcgaa > 2:1158626‑M2/2‑105 (MQ=255) aaaaaaCGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCg < 2:477390/150‑1 (MQ=255) aaaaaaCGGGAACCCGAAGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGTTATCGCTGCCcctgtaggagcggg < 2:249123‑M2/118‑15 (MQ=255) aaaaaaCGGGAACCCGAAGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGTTATCGCTGCCcctgtaggagcggg > 1:249123‑M2/1‑104 (MQ=255) aaaaCGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGggcagcgataatcctgtaggagc < 1:323481‑M1/113‑24 (MQ=255) aaaaCGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGggcagcgataatcctgtaggagc > 2:323481‑M1/1‑90 (MQ=255) aaaaCGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAG < 1:478704‑M1/89‑1 (MQ=255) aaaaCGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAG > 2:478704‑M1/1‑89 (MQ=255) gaaCTGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCgaga > 1:451003/2‑150 (MQ=255) aaaCGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGTAGCGGGTTTACCCGCGAAGAGGACAGAAACGGCAACCgaga > 1:295467/1‑150 (MQ=255) aaaCGGGAACCCGAAGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCg < 1:2033561/147‑1 (MQ=255) aCGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGaaa > 1:976491/1‑150 (MQ=255) cGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAAc > 2:726743/1‑150 (MQ=255) cGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACA < 2:1806652‑M1/84‑1 (MQ=255) cGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGACCTTTCGCGGGTAAACCCGCTCCTACA > 1:1806652‑M1/1‑84 (MQ=255) ggAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAAccc < 2:1899586/150‑1 (MQ=255) gAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAaga < 1:1945333/123‑1 (MQ=255) cTTCGGGTTCCCG‑TTTTTTTTTTTTCTTAATTTGTTTTGTCAGTGCCGGCCCTTTCCCGGGTAAACCCGCCCCTACAGGATTATCCCTCCCCTTGTAGGAGGGGGTTTACCGCCGAAGGGGCCACCCCCGGCAACAGGAAAAcccccctt > 2:1418541/1‑145 (MQ=255) cTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCgg > 2:591656/1‑131 (MQ=255) cTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCgg < 1:591656/131‑1 (MQ=255) cGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTCGTCAGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAGTAGTAACGCTGCCCCTGTAGGAGCGGGGTTAACCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTgc < 1:1616322/150‑1 (MQ=38) | GACAACCGCGTTGTTCTGTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGC > NC_002947/2456679‑2456976 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |