| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,493,952 | C→A | 5.1% | T243T (ACG→ACT) | PP_2187 ← | universal stress protein family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,493,952 | 0 | C | A | 5.1% | 307.7 / 2.6 | 95 | T243T (ACG→ACT) | PP_2187 | universal stress protein family protein |
| Reads supporting (aligned to +/- strand): ref base C (46/44); new base A (2/3); total (48/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.59e-01 | |||||||||||
TGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTCCCTGATGCCGTATTCAGCCTGGAACGCGCTGCACGCTTCACGGTAGCGCTTTTCGA > NC_002947/2493803‑2494100 | tGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGGTGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGTCCGTGCGGCACAcc > 1:1857803/1‑150 (MQ=255) atTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGcc < 1:432293/150‑1 (MQ=255) ttGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGccc > 1:1058793/1‑150 (MQ=255) ccTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATc > 2:1691690/1‑150 (MQ=255) tACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCAc > 1:533973/1‑150 (MQ=255) aCTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCAcc < 1:813766/150‑1 (MQ=255) cTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACAAATCCACGCCCCGGAAATTCCCGATCGGCACACCGTGCCCATCACCg > 2:255291/1‑150 (MQ=255) cAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTc < 1:1084459/150‑1 (MQ=255) aGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTca > 1:63965/1‑150 (MQ=255) ccGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTcacc > 2:948103/1‑150 (MQ=255) ccGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTcacc > 1:684480/1‑150 (MQ=255) ccAGCTCCGCCAGGTGGGCGATGGCTTCTGGACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCAt > 1:61800/1‑150 (MQ=255) ccAGCTCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCAt < 1:1691690/150‑1 (MQ=255) cAGCTCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATc < 2:684480/150‑1 (MQ=255) tCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACAGTGCCCATCACCGTCACCACGGCATCGa < 2:1401602/148‑1 (MQ=255) tCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACAGTGCCCATCACCGTCACCACGGCATCGa > 1:1401602/1‑148 (MQ=255) aGGTGGGCGATGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGt > 2:1334604/1‑150 (MQ=255) tGGGCGATGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCg < 2:1388239/150‑1 (MQ=255) tGGGCGATGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCg > 1:306400/1‑150 (MQ=255) gggCGATGCGTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCgg < 1:940988/150‑1 (MQ=255) gCGATGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCATCACGGCATCGAGCTTCTGTTCGGTa > 1:673878/1‑150 (MQ=255) gCGATGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTa < 1:1920397/150‑1 (MQ=255) gATGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTAtg > 2:243711/1‑150 (MQ=255) aTGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTAtgt < 1:243711/150‑1 (MQ=255) aTGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTAtgt < 2:231289/150‑1 (MQ=255) tGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTAtgtg < 1:255291/150‑1 (MQ=255) tGGCTTCCTCACCCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTAtgtg > 2:57937/1‑150 (MQ=255) cTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCACCGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGaa < 1:156108/150‑1 (MQ=255) ttCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAAt > 2:1694489/1‑150 (MQ=255) cACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAaca < 2:659372/150‑1 (MQ=255) tctTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTAtgt > 1:2140028/1‑137 (MQ=255) tctTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTAtgt < 2:2140028/137‑1 (MQ=255) tctTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCaa < 1:584132/145‑1 (MQ=255) tctTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCaa < 1:1750339/145‑1 (MQ=255) tctTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCaa > 2:584132/1‑145 (MQ=255) tctTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCaa > 2:1750339/1‑145 (MQ=255) ctTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACAGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATc > 2:1176786/1‑150 (MQ=255) ttGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATcc > 1:918999/1‑150 (MQ=255) gAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGc > 2:1865135/1‑150 (MQ=255) cACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCg < 1:1968927/86‑1 (MQ=255) cACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCg > 2:1968927/1‑86 (MQ=255) cACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAAGGATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTgg > 1:270373/1‑150 (MQ=255) aCCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCt < 1:456305/118‑1 (MQ=255) aCCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCt > 2:456305/1‑118 (MQ=255) cAGCACATCACCCTGCAGCGCATCCGGCACCGCTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGccc > 1:61368/1‑150 (MQ=255) cAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGccc > 2:2334721/1‑150 (MQ=255) cAGCACATCACCCTGCAGCGCATCCAGTACCACTTCAGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATAACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGccc > 1:93890/1‑150 (MQ=255) tCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCACATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCTGCTGGCCCTTCGGcc < 2:141459/150‑1 (MQ=255) cACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCca > 1:1523169/1‑150 (MQ=255) ccTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTAtgt > 1:828270/1‑116 (MQ=255) ccTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTAtgt < 2:828270/116‑1 (MQ=255) cTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATg > 1:1063877/1‑150 (MQ=255) gCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCt > 2:2259431/1‑102 (MQ=255) gCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCt < 1:2259431/102‑1 (MQ=255) cAGCGCATCCAGTACCACTTCCGAGGGATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACCGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAg < 2:929279/150‑1 (MQ=255) cgcATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCa < 2:306400/150‑1 (MQ=255) gTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCCTCGGCCACATGCAGGCATTCTTccc > 1:440929/1‑150 (MQ=255) ccACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTATGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGCCATTCTTCCCTgc > 2:1926067/1‑149 (MQ=255) ccACGTCCGAGTGATCACCAATCAACGGCCCGAAAATACCCGTGCGGCACACCGTACCCAACGCCGTCACCACGGCATCGAGCTCCTATTCGGTATGTGGATTCAACACCTCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTCCCTGa < 2:371302/150‑1 (MQ=255) cACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTCCCTGAt > 2:627115/1‑150 (MQ=255) aCTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGc > 1:2204496/1‑55 (MQ=255) aCTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGc < 2:2204496/55‑1 (MQ=255) cTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTCCCTGATGc < 1:1865135/150‑1 (MQ=255) ttCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTCCCTGATGcc < 1:320022/150‑1 (MQ=255) ccGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTCCCTGATGCCGt > 2:333680/1‑150 (MQ=255) ccGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACAGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTCCCTGATGCCGt < 1:1176786/150‑1 (MQ=255) gAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCa < 1:1281278/127‑1 (MQ=255) gAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCa > 2:1281278/1‑127 (MQ=255) ggTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTCCCTGATGCCCTagca < 1:1834416/150‑4 (MQ=255) gTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGATTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTCCCTGATGCCGTATTCa < 1:1946361/150‑1 (MQ=255) tATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACAGTGAACAACTGGCTGATCTCGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTCCCTGATGCCGTATTCAg < 2:61368/150‑1 (MQ=255) aTTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTCCCTGATGCCGTATTCAGc < 2:918999/150‑1 (MQ=255) ttACCAATCAACGCCCCGGAAATGTCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTCCCTGATGCCGTATTCAGcc < 2:1857803/150‑1 (MQ=255) tACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTCCCTGATGCCGTATTCAGCCt > 1:1832555/1‑150 (MQ=255) ccAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGt > 1:1236539/1‑72 (MQ=255) ccAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGt < 2:1236539/72‑1 (MQ=255) ccAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTcc < 1:1764699/129‑1 (MQ=255) ccAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTcc > 2:1764699/1‑129 (MQ=255) ccAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTCCCTGATGCCGTATTCAGCCTgg > 1:1273357/1‑150 (MQ=255) aaTCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGcc < 1:670328/101‑1 (MQ=255) aaTCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGcc > 2:670328/1‑101 (MQ=255) aaTCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTCCCTGATGCCGTATTCAGCCTGGaa < 1:57937/150‑1 (MQ=255) aTCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTCCCTGATGCCGTATTCAGCCTGGAAc < 2:533973/150‑1 (MQ=255) aTCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTCCCTGATGCCGTATTCAGCCTGGAAc < 2:1523169/150‑1 (MQ=255) aCGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAg > 2:1460254/1‑112 (MQ=255) aCGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAg < 1:1460254/112‑1 (MQ=255) cGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGCCCTTCTGTTGCGCATGTGGAATCCACACATCCGCTGGCACTTCGGCCACATGCAGGCATTCGTCCCTGATGCCGTATTCAGCCTGGAACGCGCt < 1:1694489/150‑1 (MQ=255) ccGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTgg < 2:470966/89‑1 (MQ=255) ccGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTgg > 1:470966/1‑89 (MQ=255) cGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTCCCTGATGCCGTATTCAGCCTGGAACGCGCTGCACGCTTCACGGTa < 2:1273357/150‑1 (MQ=255) gCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTcc < 1:1756808/100‑1 (MQ=255) gCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTcc > 2:1756808/1‑100 (MQ=255) gCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTCCCTGATGCCGTATTCAGCCTGGAACGCGCTGCACGCTTCACGGTAGCGCtt > 2:1022608/1‑150 (MQ=255) acCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTCCCTGATGCCGTATTCAGCCTGGAACGCGCTGCACGCTTCACGGTAGCGCTTTTCg > 2:592814/1‑150 (MQ=255) acCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTCCCTGATGCCGTATTCAGCCTGGAACGCGCTGCACGCTTCACGGTAGCGCTTTTCg < 1:627115/150‑1 (MQ=255) acCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCACTTCGGCCACATGCAGGCATTTTTCCATGATGCCGTATTTAGCCTGGAACGCGCTGCACGCTTCACGGTAGCGCTTTTCg > 2:1147886/1‑150 (MQ=255) ccGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGTCCACATGCAGGCATTCTTCCATGATTCCGTATTCAGCCTGGAACGCGCTGCACGCTTCACGGTAGCGCTTTTCGa < 1:1334604/150‑1 (MQ=255) ccGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTCCCTGATGCCGTATTCAGCCTGGAACGCGCTGCACGCTTCACGGTAGCGCTTTTCGa < 2:2184017/150‑1 (MQ=255) | TGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAGCACCAGCACATCACCCTGCAGCGCATCCAGTACCACTTCCGAGGTATTACCAATCAACGCCCCGGAAATGCCCGTGCGGCACACCGTGCCCATCACCGTCACCACGGCATCGAGCTTCTGTTCGGTATGTGGAATCAACACATCCGCTGGCCCTTCGGCCACATGCAGGCATTCTTCCCTGATGCCGTATTCAGCCTGGAACGCGCTGCACGCTTCACGGTAGCGCTTTTCGA > NC_002947/2493803‑2494100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |