| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,741,794 | T→G | 5.9% | L1377W (TTG→TGG) | PP_2395 → | leucine‑rich repeat‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,741,794 | 0 | T | G | 5.9% | 188.3 / 4.3 | 68 | L1377W (TTG→TGG) | PP_2395 | leucine‑rich repeat‑containing protein |
| Reads supporting (aligned to +/- strand): ref base T (33/31); new base G (2/2); total (35/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.32e-01 | |||||||||||
TTTGCTAGACCTGGGCAGGCGTTTATGGCGCCAGGATGCAGTAGACCTGTTCGCTACCCGATGGGCGCTACAGCATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAACCCCGGAAGAGGTTGCCCGCTCCATGGTTGACCGTGAATTCTGGCAGGCGCATCTGG > NC_002947/2741645‑2741940 | tttGCTAGACCTGGGCAGGCGTTTATGGCGCCAGGATGCAGTAGACCTGTTCGCTACCCGATGGGCGCTACAGCATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCAtt > 2:1965793/1‑150 (MQ=255) cTAGACCTGGGCAGGCGTTTATGGCGCCAGGATGCAGTAGACCTGTTCGCTACCCGATGGGCGCTACAGCATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAg < 1:378288/150‑1 (MQ=255) ggACCTGGGCGGGCGTTTATGGCGCCAGGGTGCAGTAGACCTGTTCGCTACCCGATGGGCGCTACAGCATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCAATGGCAGGt < 2:1928072/149‑1 (MQ=255) cTGGGCAGGCGTTTATGGCGCCAGGATGCAGTAGACCTGTTCGCTACCCGATGGGCGCTACAGCATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGCGGGAGTGTCTCGACCTGCCATTGCAGGTgggg > 2:274514/1‑149 (MQ=255) cTGGGCAGGCGTTTATGGCGCCAGGATGCAGTAGACCTGTTCGCTACCCGATGGGCGCTACAGCATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGga < 2:1131243/150‑1 (MQ=255) tGGGCAGGCGTTTATGGCGCCAGGATGCAGTAGACCTGTTCGCTACCCGATGGGCGCTACAGCATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGgag > 1:1656845/1‑150 (MQ=255) ggCAGGCGTTTATGGCGCCAGGATGCAGTAGACCTGTTCGCTACCCGATGGGCGCTACAGCATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGaa > 2:2035685/1‑150 (MQ=255) cAGGCGTTTATGGCGCCAGGATGCAGTAGACCTGTTCGCTACCCGATGGGCGCTACAGCATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAAt < 2:2045173/150‑1 (MQ=255) gCGTTTATGGCGCCAGGATGCAGTAGACCTGTTCGCTACCCGATGGGCGCTACAGCATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAg < 2:1030474/150‑1 (MQ=255) gTTTATGGCGCCAGGATGCAGTAGACCTGTTCGCTACCCGATGGGCGCTACAGCATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCt > 1:1219108/1‑150 (MQ=255) gcaacAGGACGCAGTAGACCTGGCCGCTACCCGATGGGCGCTACAGCATGGCAGGGCGTTGGAAGGAAGCGAGGTGGGGTTGGCTTTCCGGATCGGGGTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGc < 1:2068294/146‑1 (MQ=255) gcCAGGATGCAGTAGACCTGTTCGCTACCCGATGGGCGCTAAAGCATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGa > 2:1043420/1‑150 (MQ=255) gATGCAGTAGACCTGTTCGCTACCCGATGGGCGCTACAGCATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCa < 2:488047/150‑1 (MQ=255) tAGACCTGTTCGCTACCCGATGGGCGCTACAGCATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAAt < 2:226129/124‑1 (MQ=255) tAGACCTGTTCGCTACCCGATGGGCGCTACAGCATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAAt > 1:226129/1‑124 (MQ=255) aGACCTGTTCGCTACCCGATGGGCGCTACAGCATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCt > 2:1490069/1‑150 (MQ=255) ttCGCTACCCGATGGGCGCTACAGCATGGCAGGGCGTTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCg > 2:1932713/1‑150 (MQ=255) tACCCGATGGGCGCTACAGCATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAg > 1:639540/1‑100 (MQ=255) tACCCGATGGGCGCTACAGCATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAg < 2:639540/100‑1 (MQ=255) cccGATGGGCGCTACAGCATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGCTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGAGTAAGAAATGCGGACCTTg > 2:1590615/1‑150 (MQ=255) tgcgcgcTACAGGATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGCAATGATCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACaa < 2:1116428/147‑1 (MQ=255) gggCGCTACAGCATGGCAGGGCGGTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGTGCCGCTCTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAg < 1:144579/150‑1 (MQ=255) ggCGCTACAGCATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGc < 1:1965793/150‑1 (MQ=255) gcTACAGCATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCaga > 2:2043760/1‑150 (MQ=255) cAGCATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCt > 2:659584/1‑150 (MQ=255) cATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCtgcg < 1:1859742/150‑1 (MQ=255) cATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCtgcg < 1:467044/150‑1 (MQ=255) aTGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGCCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCtgcgg < 1:2043760/150‑1 (MQ=255) cAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCtt < 1:2097278/97‑1 (MQ=255) cAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCtt > 2:2097278/1‑97 (MQ=255) ggCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGAtctc > 2:1647883/1‑102 (MQ=255) ggCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGAtctc < 1:1647883/102‑1 (MQ=255) cgcTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGACTACGGCTGCGGGCTTGGCCCTTTCGGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATg < 1:523372/150‑1 (MQ=255) cTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGTCAGAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCa < 1:2035685/150‑1 (MQ=255) aggaagCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAAc > 1:33612/1‑150 (MQ=255) aggaagCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAAc < 1:1043420/150‑1 (MQ=255) gaagCGAGGCGGGGTTGGCTTTCAGGATCGGGCTGAGGGCGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGCTGCACACAccc > 2:1104294/1‑150 (MQ=255) aagCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAAcccc < 1:801365/150‑1 (MQ=255) aagCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAAcccc < 1:2193358/150‑1 (MQ=255) gCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAACCCCgg > 1:874135/1‑150 (MQ=255) gAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAACCCCGGaa > 2:701458/1‑150 (MQ=255) gAGGTCGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCGCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAACCCCGGaa < 1:364406/150‑1 (MQ=255) gTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAACCCCGGAagag < 2:1219108/150‑1 (MQ=255) ggggTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGa < 1:2085199/65‑1 (MQ=255) ggggTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGa > 2:2085199/1‑65 (MQ=255) gTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACTTTCCATAAGCAGAGGCTGCGGTGCGGGATGCAGAAACCCCGGAAGAGGTTGc < 1:1590615/150‑1 (MQ=255) tttCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCt > 2:1029642/1‑81 (MQ=255) tttCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCt < 1:1029642/81‑1 (MQ=255) tttCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAg > 2:1189985/1‑125 (MQ=255) tttCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAg < 1:1189985/125‑1 (MQ=255) tCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAACCCCGGAAGAGGTTGCCCGCTCCa > 2:72627/1‑150 (MQ=255) ggATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAACCCCGGAAGAGGTTGCCCGCTCCATgg > 1:1772792/1‑150 (MQ=255) aTCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAACCCCGGAAGAGGTTGCCCGCTCCATGGtt > 2:1691489/1‑150 (MQ=255) aGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAACCCCGGAAGAGGTTGCCCGCTCCATGGTTGACCGTGAATTCt < 1:1490069/150‑1 (MQ=255) gtgtCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAACCCCGGAAGAGGtt < 2:1590414/121‑1 (MQ=255) gtgtCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAACCCCGGAAGAGGtt > 1:1590414/1‑121 (MQ=255) gtgtCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAACCCCGGAAGAGGTTGCCCGCTCCATGGTTGACCGTGAATTCTg > 1:1665949/1‑150 (MQ=255) tcccaCCTGCAATGGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAACCCCGGAAGAGGTTGCCCGCTCCATGGTTGAc < 2:1794276/131‑1 (MQ=255) tcccaCCTGCAATGGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAACCCCGGAAGAGGTTGCCCGCTCCATGGTTGAc > 1:1794276/5‑135 (MQ=255) tcGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAACCCCGGAAGAGGTTGCCCGCTCCATGGTTGACCGTGAATTCTGGCAgg > 2:1617395/1‑150 (MQ=255) tcGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCAAACACACGTGCTGCGGTGCGGGATCAAGAAAACGCGGCAGAGGTTGCCCGCTCCATGGTTGACCGTGAATTCTGGCAgg > 1:1103551/1‑150 (MQ=255) ccaCCTGCAATGGCAGGTGGGAGCAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCATAGGCTGCGGTGCGGGATGCAGAAACCCCGGAAGAGGTTGCCCGCTCCATGGTTGACCGTGAATTCTGGCAggg > 2:2057243/3‑149 (MQ=255) cGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGc < 1:1919425/96‑1 (MQ=255) cGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGc > 2:1919425/1‑96 (MQ=255) cGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCAATAATAGTGCCACGGGAGTCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAACCCCGGAAGAGGTTGCCCGCTCCATGGTTGACCGTGAATTCTGGCAGgc < 1:2272332/150‑1 (MQ=255) gACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAACCCCGGAAGAGGTTGCCCGCTCCATGGTTGACCGTGAATTCTGGCAGgcg > 2:1851420/1‑150 (MQ=255) tGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAACCCCGGAAGAGGTTGCCCGCTCCATGGTTGACCGTGAATTCTGGCAGGCGCATc > 2:2110051/1‑150 (MQ=255) gCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAACCCCGGAAGAGGTTGCCCGCTCCATGGTTGACCGTGAATTCTGGCAGGCGCATCt > 1:290296/1‑150 (MQ=255) cATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAACCCCGGAAGAGGTTGCCCGCTCCATGGTTGACCGTGAATTCTGGCAGGCGCATCTgg > 2:759435/1‑150 (MQ=255) | TTTGCTAGACCTGGGCAGGCGTTTATGGCGCCAGGATGCAGTAGACCTGTTCGCTACCCGATGGGCGCTACAGCATGGCAGGGCGCTGGAAGGAAGCGAGGTGGGGTTGGCTTTCAGGATCGGGCTGAGGGAGTGTCTCGACCTGCCATTGCAGGTGGGAGAAATGAGCTTTCTTGCGATCTCAGGCGTTCTGGATGCGGACCTTGCACAAGCAGAGGCTGCGGTGCGGGATGCAGAAACCCCGGAAGAGGTTGCCCGCTCCATGGTTGACCGTGAATTCTGGCAGGCGCATCTGG > NC_002947/2741645‑2741940 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |