| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,742,960 | C→T | 6.1% | H5Y (CAC→TAC) ‡ | PP_2397 → | EF hand domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,742,960 | 0 | C | T | 6.1% | 289.6 / 6.5 | 98 | H5Y (CAC→TAC) ‡ | PP_2397 | EF hand domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (44/48); new base T (2/4); total (46/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.80e-01 | |||||||||||
CCTGCCAGCGAAAAGGCGGTGGCGGCACCCGAGCCCGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCGCAACGGCCTAATGGCTCCACTTTCCAACCCCAGTGGAGCT > NC_002947/2742813‑2743107 | cctgccAGCGAAAAGGCGGTGGCGGCACCCGAGCCCGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCAc > 2:312131/1‑150 (MQ=255) tgccAGCGAAAAGGCGGTGGCGGCACCCGAGCCCGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCt > 2:1128937/1‑150 (MQ=255) ccAGCGAAAAGGCGGTGGCGGCACCCGAGCCCGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTg > 2:919878/1‑150 (MQ=255) ccAGCGAAAAGGCGGTGGCGGCACCCGAGCCCGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTg > 1:788313/1‑150 (MQ=255) ccAGCGAAAAGGCGGTGGCGGCACCCGAGCCCGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTg > 2:600298/1‑150 (MQ=255) cAGCGAAAAGGCGGTGGCGGCACCCGAGCCCGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTgg > 1:2054439/1‑150 (MQ=255) aGCGAAAAGGCGGTGGCGGCACCCGAGCCCGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTggg < 1:1941026/150‑1 (MQ=255) aGCGAAAACGCCTTGGCGGCACCCGAGCCCATAGCGGCGGCCCCGCAAGCCAACGAAACGTTAAGCAACCCGGCCAAGCACACCAAGCCATCGGCCCCGCCCAACCCGCTGTAAGACTTATCACGCCTCATGGCCCCAAGGCACCTTggg < 1:165205/150‑1 (MQ=255) gggAAAAGGCGGTGGCGGCACCCGAGCCCGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTgggg < 1:2215716/148‑1 (MQ=255) cGAAAAGGCGGTGGCGGCACCCGAGCCCGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGc < 2:1490932/150‑1 (MQ=255) cGAAAAGGCGGTGGCGGCACCCGAGCCCGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGc < 2:124617/150‑1 (MQ=255) cGAAAAGGCGGTGGCGGCACCCGAGCCCGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAACCCCGCCAAGCCAGCGGCCCCGCCGAATCCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGTGCCTTGGGGc < 2:5844/150‑1 (MQ=255) aaaaGGCGGTGGCGGCACCCGAGCCCGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGTGCCTTGGGGcca < 1:212038/150‑2 (MQ=255) aGGCGGTGGCGGCACCCGAGCCCGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGtt < 2:1749437/150‑1 (MQ=255) ggCGGTGGCGGCACCCGAGCCCGTAGCGGCGGAACAACAAGCATATGATAATTTGAGCAAGCCGGCCAAGGCCCTCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGccatgag < 1:2271364/150‑6 (MQ=255) ggTTGCGGCACCCGAGCCCGTAGCGGCGGCCCCGCAAGCCAAGAAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGAGTACGCCTCAGGGCCCCAAGGCACCTTGGGGCCCGTTGCCg < 1:2159344/150‑1 (MQ=255) gTGGCGGCACCCGAGCCCGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGTGCCTTGGGGcca > 2:1089209/1‑141 (MQ=255) gTGGCGGCACCCGAGCCCGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGTGCCTTGGGGcca < 1:1089209/142‑2 (MQ=255) cACCCGAGCCCGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGgtgt < 2:484011/150‑1 (MQ=255) cACCCGAGCCCGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGgtgt < 1:380130/150‑1 (MQ=255) cccGAGCCCGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGgtgtgt > 1:526605/1‑150 (MQ=255) ccGAGCCCGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTa < 1:855282/150‑1 (MQ=255) ccGAGCCCGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTa > 1:148269/1‑150 (MQ=255) cccGTAGCGGCGTCCCCACAAGACAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCACCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAACGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCa < 1:548711/150‑1 (MQ=255) ccGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCAc > 2:789494/1‑150 (MQ=255) ccGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAACGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCAc > 1:1950929/1‑150 (MQ=255) gTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTg > 2:1337139/1‑150 (MQ=255) ggcggcCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCt < 1:786851/150‑1 (MQ=255) gcggcCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGt < 2:469267/145‑1 (MQ=255) gcggcCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGt > 1:469267/1‑145 (MQ=255) ccGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑Ctgtg > 1:285389/1‑150 (MQ=255) gCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGtgct < 1:505348/150‑1 (MQ=255) aaGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGGGGTGTGGATCGCACTGTATTTGC‑CTGtgctgc > 1:386749/1‑150 (MQ=255) aGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCa < 1:600298/150‑1 (MQ=255) aGCCAAGGAAAAGAACAGCACGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCa < 1:1970574/150‑1 (MQ=255) ccAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGa < 1:919878/150‑1 (MQ=255) cAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGAc < 2:2128877/150‑1 (MQ=255) aaGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGAcc > 1:1622323/1‑150 (MQ=255) aGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGgtgt < 2:2166472/117‑1 (MQ=255) aGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGgtgt > 1:2166472/1‑117 (MQ=255) gAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTAc > 2:1942482/1‑150 (MQ=255) aaaGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTg < 1:1787057/150‑1 (MQ=255) aaGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGc < 2:285389/150‑1 (MQ=255) ggACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCa < 1:1128937/150‑1 (MQ=255) cAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCa < 2:1056655/78‑1 (MQ=255) cAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCa > 1:1056655/1‑78 (MQ=255) cAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACaaa > 1:2183689/1‑150 (MQ=255) aGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAg > 1:1735786/1‑150 (MQ=255) aGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAg < 2:135165/150‑1 (MQ=255) cgtccAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑Ctgtg < 2:1663101/119‑1 (MQ=255) cGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑Ctgtg > 1:1663101/1‑122 (MQ=255) gCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAgcgcgc < 1:1337139/150‑1 (MQ=255) ccAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGggtggt > 2:452958/1‑94 (MQ=255) ccAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGggtggt < 1:452958/94‑1 (MQ=255) aaGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTg < 2:517775/150‑1 (MQ=255) aaGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTg > 1:1189064/1‑150 (MQ=255) aaGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTg > 2:1937687/1‑150 (MQ=255) ccGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCAc > 1:1831234/1‑150 (MQ=255) ccGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACACCCAACCGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCAc > 1:1591293/1‑150 (MQ=255) gCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGa > 2:1566712/1‑150 (MQ=255) cAAGCCAGCGGCCCCGCCCAAACAGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTTTGTATGGCAGTGTATCTGC‑ATGTGCTGGAGACCTACTGCCATAGAAAAGAGGGCCTGGGACGATa > 1:848462/1‑150 (MQ=255) cAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCACGCCTGGCACGACACATcc > 2:523334/1‑150 (MQ=255) aGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTTCCATACAAAAGCGCGCCTGGCACGATACATccc < 2:1622323/150‑1 (MQ=255) gCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATTGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATcccc < 2:256653/150‑1 (MQ=255) gCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATcccc < 2:788313/150‑1 (MQ=255) gggcccGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGa < 1:1731812/147‑1 (MQ=255) ggCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGa < 2:2054439/150‑1 (MQ=255) cccGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAgcgc > 2:2196656/1‑125 (MQ=255) cccGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAgcgc < 1:2196656/125‑1 (MQ=255) cGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAAc < 1:1937687/150‑1 (MQ=255) cccAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCg < 2:2183689/150‑1 (MQ=255) cTGGAAGACTGATCACGCCTCATCGCCCCAAGGCACCTTGGGGCACGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCGCAACGGCCt < 1:312131/150‑1 (MQ=255) gAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCGCAACGGCCTaag > 1:1026638/1‑149 (MQ=255) gAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCGCAACGGCCTAAt > 2:497732/1‑150 (MQ=255) gAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCGCAACGGCCTAAt > 2:1577286/1‑150 (MQ=255) gAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCGCAACGGCCTAAt > 1:1125636/1‑150 (MQ=255) aGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCGCAACGGCCTAATgg < 1:723185/150‑1 (MQ=255) aGACTGATAACGTGTACTTGCCCCTAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCGCAACGGCCTAATgg < 2:1591293/150‑1 (MQ=255) gATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCGCAACGGCCTAATGGCTccc > 2:2228588/1‑149 (MQ=255) tCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCGCAACGGCCTAATGGCTCCACt < 2:526605/150‑1 (MQ=255) gCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCGCAACGGCCTAATGGCTCCACTTTcc > 1:307368/1‑150 (MQ=255) cTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCGCAACGGCCTAATGGCTCCACTTTCCaa > 2:1403515/1‑150 (MQ=255) tCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCGCAACGGCCTAATGGCTCCACTTTCCAAc > 1:1577640/1‑150 (MQ=255) aTGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACACACCGCAACGGCCTAATGGCTCCACTTTCCAAccc > 1:693045/1‑150 (MQ=255) aTGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCGCAACGGCCTAATGGCTCCACTTTCCAAccc < 1:1566712/150‑1 (MQ=255) aTGGCCCCAAGGCACCTTGGGGCCCGTTGCCCGGTGGCATGTGGAGCAGGGTA‑GTGCTCTGTGCTGCAGAAAACCGGCTATACAAAAGCGCGCCTGGCACTATACAGCCCCGACAAACCGCAACGGCCTAATGGCTCCACTTTCCAAccc < 1:523334/150‑1 (MQ=255) tGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCGCAACGGCCTAATGGCTCCACTTTCCAAcccc > 1:2285830/1‑150 (MQ=255) gggCCCCAAGGTGCCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGtgctgc < 2:1801881/65‑1 (MQ=38) gggCCCCAAGGTGCCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGtgctgc > 1:1801881/2‑66 (MQ=38) ggCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCGCAACGGCCTAATGGCTCCACTTTCCAACCCCa < 2:1831234/150‑1 (MQ=255) ggCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCGCAACGGCCTAATGGCTCCACTTTCCAACCCCa < 1:1577286/150‑1 (MQ=255) cccAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCGCAACGGCCTAATGGCTcc < 1:952799/133‑1 (MQ=255) cccAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCGCAACGGCCTAATGGCTcc > 2:952799/1‑133 (MQ=255) cAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATAc > 1:1906021/1‑98 (MQ=255) cAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATAc < 2:1906021/98‑1 (MQ=255) ggCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCGCAACGGCCTAATGGCTCCACTTTCCAAccc < 1:697106/140‑1 (MQ=255) ggCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCGCAACGGCCTAATGGCTCCACTTTCCAAccc > 2:697106/1‑140 (MQ=255) ggCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCGCAACGGCCTAATGGCTCCACTTTCCAACCCCAGTGGAGCt > 1:1239632/1‑150 (MQ=255) | CCTGCCAGCGAAAAGGCGGTGGCGGCACCCGAGCCCGTAGCGGCGGCCCCGCAAGCCAAGGAAAAGGACAGCAAGCCGGCCAAGCCCGCCAAGCCAGCGGCCCCGCCCAAACCGCTGGAAGACTGATCACGCCTCATGGCCCCAAGGCACCTTGGGGCCCGTTGCCGGGTGGTGTGTATCGCACTGTATCTGC‑CTGTGCTGCAGACCTACTGCCATACAAAAGCGCGCCTGGCACGATACATCCCCGACAAACCGCAACGGCCTAATGGCTCCACTTTCCAACCCCAGTGGAGCT > NC_002947/2742813‑2743107 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |