| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,816,637 | T→A | 10.1% | I21N (ATT→AAT) | PP_2472 → | MerR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,816,637 | 0 | T | A | 10.1% | 272.5 / 21.9 | 99 | I21N (ATT→AAT) | PP_2472 | MerR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (42/47); new base A (5/5); total (47/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.00e-01 | |||||||||||
Only 100 of 102 total aligned reads displayed.
CCCAAGACAGGGGAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAGATTCG > NC_002947/2816488‑2816781 | cccAAGACAGGGGAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCAt > 1:124570/1‑150 (MQ=255)cccAAGACAGGGGAAGAGATCCCGATCACCGCACGGCGCGGCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCAt > 2:2020749/1‑150 (MQ=255) ccAAGACAGGGGGAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCAtt > 2:1609153/1‑150 (MQ=255) aaGACAGGGGAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGTCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTgg < 2:110721/150‑1 (MQ=255) aGGGGAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAg > 2:1394581/1‑150 (MQ=255) aGGGGAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAg < 1:1394581/150‑1 (MQ=255) ggggAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGt < 1:1993036/150‑1 (MQ=255) aaGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGc < 2:2026878/150‑1 (MQ=255) aaGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGc < 2:2027144/150‑1 (MQ=255) cgatctccGATCACCGCACGGCGCGTCGTAACCTTTCGGCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGCAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGa < 1:1091400/144‑1 (MQ=255) aTCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGtt < 2:1283349/150‑1 (MQ=255) cccGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTtgt < 1:2121808/150‑1 (MQ=255) cccGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTtgt > 2:2121808/1‑150 (MQ=255) cccGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTtgt < 1:2076132/150‑1 (MQ=255) cGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTtgtgt > 1:1331169/1‑150 (MQ=255) cGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTtgtgt > 2:1406340/1‑150 (MQ=255) cGATCACCGCACGACGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGGCAAACTGCCCCCCGTACCGGACAAACGCTACTTCAGCATCGGTGCATTGAGCGAgagatcg > 2:1091400/1‑144 (MQ=255) gATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTtgtgtg < 1:2141785/150‑1 (MQ=255) aTCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCAATGGTGAAGta > 2:2199118/1‑135 (MQ=255) aTCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCAATGGTGAAGta < 1:2199118/136‑2 (MQ=255) tCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGACGTTGACGGCACGGGCTAACGCCTATGCTGGAACAAAGCCATAACGTCGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGcc > 2:2017513/1‑150 (MQ=255) ccGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATATCGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTa > 1:2173370/1‑150 (MQ=255) gaaCGGCGCGTCGTCACTTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTaaa < 2:209128/148‑1 (MQ=255) aCGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGc < 2:1996461/150‑1 (MQ=255) gtcgtcACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCacac < 1:729445/148‑1 (MQ=255) gtcgtcACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCacac > 2:729445/1‑148 (MQ=255) cACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGtgc‑tgc < 2:2173370/150‑1 (MQ=255) cACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGtgc‑tgc < 1:1406340/150‑1 (MQ=255) cACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGtgc‑tgc < 1:2205118/150‑1 (MQ=255) ccTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCgg > 2:1790081/1‑150 (MQ=255) cTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGt > 1:1045582/1‑150 (MQ=255) tttCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGCACCAAGGCATAACGACGACCTGCCCCCCATAGCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGGGC‑TGCggga > 1:689843/1‑148 (MQ=255) tttCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTg > 2:1687870/1‑104 (MQ=255) tttCGTCCAGGGCAGAAGTTGAAGGCCAGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTg < 1:1687870/104‑1 (MQ=255) cGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGGATTg < 2:94348/150‑1 (MQ=255) gTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTgg < 1:2186648/150‑1 (MQ=255) cAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGaa < 1:1274922/102‑1 (MQ=255) cAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGaa > 2:1274922/1‑102 (MQ=255) aGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGc > 2:631950/1‑150 (MQ=255) gggCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCa < 2:124570/150‑1 (MQ=255) ggCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAg > 1:391087/1‑150 (MQ=255) ggCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAg < 1:1609153/150‑1 (MQ=255) cAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGtt > 2:1952934/1‑108 (MQ=255) cAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGtt < 1:1952934/108‑1 (MQ=255) cAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGa > 1:418325/1‑150 (MQ=255) gAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGt < 2:1045582/150‑1 (MQ=255) gTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCg < 1:631950/150‑1 (MQ=255) gTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCg > 2:806803/1‑150 (MQ=255) gAAGGCCCGGGTTGAGGCCTATGATGTAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGAcc > 1:900263/1‑150 (MQ=255) ggCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGc > 2:739082/1‑150 (MQ=255) ggCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCAATGGTGAAg > 2:1548751/1‑87 (MQ=255) ggCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCAATGGTGAAg < 1:1548751/87‑1 (MQ=255) ccGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGa > 2:2288736/1‑150 (MQ=255) cGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGaa < 1:2117369/150‑1 (MQ=255) gggTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCAATGGTGAAGtagc < 1:980314/86‑4 (MQ=255) gggTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCAATGGTGAAGtagc > 2:980314/1‑83 (MQ=255) ggTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAAcc < 1:1802824/150‑1 (MQ=255) ttGAGGCCTATGCTGGAGCCAAGCCATAACGACGAACTGCCGCCCATACCGGGCAAACGCTACTTAACCATTGGTGAAGTGAGCGAGTTGTGTGCAGTAAAGCCACAGCTGCGTGTAG‑GGGGGGAGTAGGAGTTCGACCAGCTGAACCCt > 2:186969/1‑150 (MQ=255) gCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTgg < 1:2107090/118‑1 (MQ=255) gCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTgg > 2:2107090/1‑118 (MQ=255) cTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGcggcgg < 1:2020749/150‑1 (MQ=255) tGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGt > 1:664115/1‑105 (MQ=255) tGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGt < 2:664115/105‑1 (MQ=255) tGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCggg < 1:843128/150‑1 (MQ=255) aCCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGaa > 2:1570224/1‑150 (MQ=255) cAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCtg > 2:2313937/1‑132 (MQ=255) cAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCtg < 1:2313937/132‑1 (MQ=255) cAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAAcc > 2:707722/1‑150 (MQ=255) gCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACcggc < 1:739082/150‑1 (MQ=255) ccATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACcggcg > 1:538174/1‑150 (MQ=255) cATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACcggcgg < 2:2109431/150‑1 (MQ=255) cATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACcggcgg < 1:2288736/150‑1 (MQ=255) tAACGACGAAATGCCCACCATACCGGGCAAACGCTACTTCACCATTTGTGAAGTGAGCGAGGTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGCGCAGGAGTTCGTCCAGTTGAACCCTGTGAAGCGGCGGGGGAGCGCGCGGTa < 2:617033/150‑1 (MQ=255) aaCGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATGGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGGGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTAt > 1:223787/1‑150 (MQ=255) acgtcgAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGGGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTAtt > 1:1927126/1‑150 (MQ=255) gacgaACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTg > 2:2290817/1‑92 (MQ=255) gacgaACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTg < 1:2290817/92‑1 (MQ=255) gacgaACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTAc > 2:1902607/1‑150 (MQ=255) cgaACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCa < 2:418325/150‑1 (MQ=255) gaACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAg > 1:2107551/1‑150 (MQ=255) tGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTAtt > 1:797420/1‑84 (MQ=255) tGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTAtt < 2:797420/84‑1 (MQ=255) ccccccATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTAc > 1:1952509/1‑141 (MQ=255) ccccccATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTAc < 2:1952509/141‑1 (MQ=255) ccccATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGa > 1:1419223/1‑150 (MQ=255) cccATACCGGGCAAACGCGACTTCACCATGGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGAt < 2:1927126/150‑1 (MQ=255) ccATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGAtg > 2:744915/1‑150 (MQ=255) ccATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGAtg < 2:985996/150‑1 (MQ=255) ccATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGAtg < 2:2107551/150‑1 (MQ=255) aTACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGAtgtg < 1:1570224/150‑1 (MQ=255) ccGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGACGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCtg > 1:1348831/1‑150 (MQ=255) cGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCtga < 1:744915/150‑1 (MQ=255) gggCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCtgat < 2:1419223/150‑1 (MQ=255) ccgatctcGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCATGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGTAACTGGCGGTATTACCAGCGCAAGGATGTGCtgat < 1:1031729/143‑1 (MQ=255) aaaCGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTgatgata > 1:2252949/1‑149 (MQ=255) tcgctcaCTTCACCAATGGTGAAGTAAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGGTGTGCTGATGATcc > 2:1474145/7‑150 (MQ=255) gCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCATGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCtgatgagatcgg > 2:1031729/1‑144 (MQ=255) ctcaCTTCACCAAGGGTGAAGTAAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTGGGGGGAGCAGGAGTGCGGCCAGCTGAGCGCTGTGAAGGGGCGGGGGGACCGGCGGTATTACCAGCGCCAGGATGTGGTGATGATCCGcc < 1:1474145/147‑1 (MQ=255) ttCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAGAtt > 1:1328331/1‑150 (MQ=255) cACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAGATTCg > 2:1340784/1‑150 (MQ=255) | CCCAAGACAGGGGAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGC‑TGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAGATTCG > NC_002947/2816488‑2816781 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |