Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,880,367 G→A 7.1% G56S (GGC→AGC)  PP_2535 → transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,880,3670GA 7.1% 245.1 / 6.3 84G56S (GGC→AGC) PP_2535transport protein
Reads supporting (aligned to +/- strand):  ref base G (44/34);  new base A (2/4);  total (46/38)
Fisher's exact test for biased strand distribution p-value = 4.03e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01

TGTCGCACTCGCCATCGGTGCCTTCGGCATCGGCGTTACAGAGTTTGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTT  >  NC_002947/2880222‑2880511
                                                                                                                                                 |                                                                                                                                                
tGTCGCACTCGCCATCGGTGCCTTCGGCATCGGCGTTACAGAGTTTGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGgcgc                                                                                                                                              <  2:2031779/150‑1 (MQ=255)
    gCACTCGCCATCGGTGCCTTCGGCATCGGCGTTACAGAGTTTGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCAGCGGCGCGCCGATCAGCAcgccg                                                                                                                                          >  1:2337476/1‑150 (MQ=255)
     cACTCGCCATCGGTGCCTTCGGCATCGGCGTTACAGAGTTTGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGcgccgc                                                                                                                                         <  1:2284122/150‑1 (MQ=255)
      aCTCGCCATCGGTGCCTTCGGCATCGGCGTTACAGAGTTTGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCt                                                                                                                                        >  2:1207267/1‑150 (MQ=255)
      aCTCGCCATCGGTGCCTTCGGCATCGGCGTTACAGAGTTTGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGCGCCGATCAGCAcgccgat                                                                                                                                        <  1:1859996/150‑3 (MQ=255)
       cTCGCCATCGGTGCCTTCGGCATCGGCGTTACAGAGTTTGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCtg                                                                                                                                       >  2:119642/1‑150 (MQ=255)
        tCGCCATCGGTGCCTTCGGCATCGGCGTTACAGAGTTTGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCtga                                                                                                                                      >  2:363318/1‑150 (MQ=255)
        tCGCCATCGGTGCCTTCGGCATCGGCGTTACAGAGTTTGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGCGCCGATCAGCACGCCGAtgg                                                                                                                                      <  1:1806789/150‑2 (MQ=255)
         cGCCATCGGTGCCTTCGGCATCGGCGTTACAGAGTTTGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCtgat                                                                                                                                     <  2:2033565/150‑1 (MQ=255)
           ccATCGGTGCCTTCGGCATCGGCGTTACAGAGTTTGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCtgatga                                                                                                                                   >  1:278226/1‑150 (MQ=255)
            cATCGGTGCCTTCGGCATCGGCGTTACAGAGTTTGCCCCCATGGTCATGTTGCCAAGTATCGCTACCGACCTCGTTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGCGCCGATCAGCACGCCGAtggcata                                                                                                                                  <  2:115715/150‑6 (MQ=255)
            cATCGGTGCCTTCGGCATCGGCGTTACAGAGTTTGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGAc                                                                                                                                  >  1:54664/1‑150 (MQ=255)
                      ttCGGCATCGGCGTTACAGAGTTTGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCAGCGGCGCGCCGATCAGCAcgccgatg                                                                                                                                       >  2:1820831/1‑132 (MQ=255)
                      ttCGGCATCGGCGTTACAGAGTTTGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCAGCGGCGCGCCGATCAGCACGCCGAtg                                                                                                                                       <  1:1820831/135‑1 (MQ=255)
                           cATGGGCGTTACAGAGTTTGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGCAAGTGGCTATGCCATTGGCGTGCTTATCGGCGCGCCGCTGATGACCCTGGCCACGGTGaa                                                                                                                   <  1:287682/150‑1 (MQ=255)
                             tCGGCGTTACAGAGTTTGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGTTGATCGGCGCGCCGCGGAGGACCCTGGCCACGGTGAAGa                                                                                                                 >  1:1683165/1‑150 (MQ=255)
                             tCGGCGTTACAGAGTTTGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGa                                                                                                                 >  1:27023/1‑150 (MQ=255)
                                        gagTTTGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGt                                                                                                      >  1:922827/1‑150 (MQ=255)
                                           tttGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTAc                                                                                                   >  1:433773/1‑150 (MQ=255)
                                           tttGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGGGAAGATCCCGCGCCGTTAc                                                                                                   >  2:505908/1‑150 (MQ=255)
                                            ttGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTAcc                                                                                                  <  2:1371595/150‑1 (MQ=255)
                                             tGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCt                                                                                                 <  1:1478231/150‑1 (MQ=255)
                                             tGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCt                                                                                                 <  2:922827/150‑1 (MQ=255)
                                                ccccATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGtt                                                                                              <  2:433773/150‑1 (MQ=255)
                                                 cccATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTg                                                                                             >  2:78325/1‑150 (MQ=255)
                                                  ccATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGa                                                                                            >  2:989151/1‑150 (MQ=255)
                                                  ccATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGa                                                                                            >  1:1533375/1‑150 (MQ=255)
                                                        gCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGc                                                                                      <  2:54664/150‑1 (MQ=255)
                                                         caacatGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGa                                                                                                                 >  1:1078041/6‑122 (MQ=255)
                                                         caacatGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGa                                                                                                                 <  2:1078041/117‑1 (MQ=255)
                                                              tGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATgg                                                                                <  1:363318/150‑1 (MQ=255)
                                                               gCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGc                                                                               >  1:1269048/1‑150 (MQ=255)
                                                                 ccAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCgg                                                                                        >  1:194804/1‑139 (MQ=255)
                                                                 ccAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCgg                                                                                        <  2:194804/139‑1 (MQ=255)
                                                                            aCCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGGTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTg                                                                  >  1:1777142/1‑150 (MQ=255)
                                                                             ccGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGTCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTgg                                                                 <  1:1673257/150‑1 (MQ=255)
                                                                             ccGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTgg                                                                 <  2:2002215/150‑1 (MQ=255)
                                                                             ccGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCATATGCGATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTgg                                                                 <  1:1895166/150‑1 (MQ=255)
                                                                              cGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTggg                                                                <  2:1533375/150‑1 (MQ=255)
                                                                                 ccTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCaa                                                             <  2:27023/150‑1 (MQ=255)
                                                                                   tCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAAcc                                                           <  1:1207267/150‑1 (MQ=255)
                                                                                   tCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAAc                                                            <  2:605222/149‑1 (MQ=255)
                                                                                   tCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGCGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAAc                                                            >  1:605222/1‑149 (MQ=255)
                                                                                           tCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGaa                                                                                                                   >  2:1848271/1‑86 (MQ=255)
                                                                                           tCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGaa                                                                                                                   <  1:1848271/86‑1 (MQ=255)
                                                                                           tCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCg                                                   <  2:1446175/150‑1 (MQ=255)
                                                                                            ccATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGa                                                                                   <  2:1845128/117‑1 (MQ=255)
                                                                                            ccATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGa                                                                                   >  1:1845128/1‑117 (MQ=255)
                                                                                             cATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGc                                                 <  1:1467918/150‑1 (MQ=255)
                                                                                              aTTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGaa                                                                                                                   >  1:1252208/1‑83 (MQ=255)
                                                                                              aTTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGaa                                                                                                                   <  2:1252208/83‑1 (MQ=255)
                                                                                              aTTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGcc                                                >  1:1472369/1‑150 (MQ=255)
                                                                                              aTTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGcc                                                >  2:1759423/1‑150 (MQ=255)
                                                                                              aTTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGcc                                                >  2:463118/1‑150 (MQ=255)
                                                                                              aTTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGcc                                                >  1:245630/1‑150 (MQ=255)
                                                                                               ttCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTg                                                                  >  2:1334981/1‑131 (MQ=255)
                                                                                               ttCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTg                                                                  <  1:1334981/131‑1 (MQ=255)
                                                                                                 ccTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTg                                             >  1:2053907/1‑150 (MQ=255)
                                                                                                  ctgctgCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTgg                                            >  1:895866/1‑150 (MQ=255)
                                                                                                   tgctgcGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTgg                                                                 <  1:285944/128‑1 (MQ=255)
                                                                                                   tgctgcGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTgg                                                                 >  2:285944/1‑128 (MQ=255)
                                                                                                   tgctgcGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGATGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTCTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGc                                           >  1:2229266/1‑150 (MQ=255)
                                                                                                     ctgcGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCa                                         <  1:463118/150‑1 (MQ=255)
                                                                                                             ctgctgGTCAGTGCTTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTAc                                 <  1:707469/150‑1 (MQ=255)
                                                                                                              tgctgGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACg                                >  1:1132179/1‑150 (MQ=255)
                                                                                                                 tgGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCa                             >  2:1861576/1‑150 (MQ=255)
                                                                                                                           cTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGc                                                                                      <  2:1711305/83‑1 (MQ=255)
                                                                                                                           cTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGc                                                                                      >  1:1711305/1‑83 (MQ=255)
                                                                                                                           cTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCtggt                   <  2:278226/150‑1 (MQ=255)
                                                                                                                           cTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCtggt                   >  2:790231/1‑150 (MQ=255)
                                                                                                                            tATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTgg                                                                 <  1:625602/103‑1 (MQ=255)
                                                                                                                            tATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTgg                                                                 >  2:625602/1‑103 (MQ=255)
                                                                                                                              tGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGc                               >  1:1563546/1‑135 (MQ=255)
                                                                                                                              tGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGc                               <  2:1563546/135‑1 (MQ=255)
                                                                                                                               gCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGcc               >  1:1427898/1‑150 (MQ=255)
                                                                                                                                 cATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCtt                                                                   >  1:1706300/1‑96 (MQ=255)
                                                                                                                                 cATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCtt                                                                   <  2:1706300/96‑1 (MQ=255)
                                                                                                                                 cATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCcg             >  2:1181522/1‑150 (MQ=255)
                                                                                                                                      gCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTgg        >  2:13548/1‑150 (MQ=255)
                                                                                                                                         tGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGtca     >  2:1492578/1‑150 (MQ=255)
                                                                                                                                           cTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGtcact   >  2:1004243/1‑150 (MQ=255)
                                                                                                                                            tGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGGCTACGCCAGc                           <  1:1518886/125‑1 (MQ=255)
                                                                                                                                            tGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGGCTACGCCAGc                           >  2:1518886/1‑125 (MQ=255)
                                                                                                                                            tGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGtccctt  >  2:2220012/1‑150 (MQ=255)
                                                                                                                                                 |                                                                                                                                                
TGTCGCACTCGCCATCGGTGCCTTCGGCATCGGCGTTACAGAGTTTGCCCCCATGGGCATGTTGCCCAGTATCGCTACCGACCTCGGTGTTTCCATTCCTGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTT  >  NC_002947/2880222‑2880511

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑