| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,030,460 | G→C | 9.5% | intergenic (+417/‑277) | pcaY → / → mgtA | aromatic acid chemoreceptor/ATP‑dependent magnesium transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,030,460 | 0 | G | C | 9.5% | 215.7 / 13.5 | 74 | intergenic (+417/‑277) | pcaY/mgtA | aromatic acid chemoreceptor/ATP‑dependent magnesium transporter |
| Reads supporting (aligned to +/- strand): ref base G (27/40); new base C (4/3); total (31/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.21e-01 | |||||||||||
CCGCCGCCGGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAA > NC_002947/3030311‑3030607 | ccgccgccgGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCTCCAGCACCCCCCAag < 2:2322891/150‑1 (MQ=255) gccgccgGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAagta > 1:2170598/1‑150 (MQ=255) tgtTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCggg < 1:2159830/150‑1 (MQ=255) gAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCgg > 2:1925956/1‑136 (MQ=255) gAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCgg < 1:1925956/136‑1 (MQ=255) aGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCt > 1:2265985/1‑150 (MQ=255) aGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCt < 2:1685804/150‑1 (MQ=255) gCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTc < 2:1720771/150‑1 (MQ=255) aaGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCAt < 1:793134/150‑1 (MQ=255) aaGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCAt < 1:1859803/150‑1 (MQ=255) aGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATg < 2:800415/150‑1 (MQ=255) aGCTCATGAACCTCACTTCATTCAATTCACATCGCCAGCCGTCGTGCCTTGCGCCGCGG‑CAGGCCACTCAGCTCG‑CGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGATGGCGCGTCTTCATg < 1:2156123/150‑1 (MQ=255) tCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCGCCAGCACCCCGCAACTACTTGGGGGGTGCt > 1:2297743/1‑133 (MQ=39) tCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCGCCAGCACCCCGCAACTACTTGGGGGGTGCt < 2:2297743/133‑1 (MQ=39) gAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCtt > 1:1944179/1‑150 (MQ=255) gAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCtt < 2:836148/150‑1 (MQ=255) aCCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGa < 2:1944179/150‑1 (MQ=255) aCCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGa < 1:549127/150‑1 (MQ=255) ccTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCGCAACTACTTGGGGGGTGCTgg < 1:86832/128‑1 (MQ=39) ccTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCGCAACTACTTGGGGGGTGCTgg > 2:86832/1‑128 (MQ=39) ccTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAg > 2:1211472/1‑150 (MQ=255) cTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGc > 2:1418095/1‑150 (MQ=255) cACTTCATTCGTTTCATATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGccc > 2:256642/1‑150 (MQ=255) cTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGccccc > 1:200728/1‑150 (MQ=255) cacaTCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCgg < 1:780997/103‑1 (MQ=255) cacaTCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCgg > 2:780997/1‑103 (MQ=255) cacaTCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACt < 1:305682/150‑1 (MQ=255) acaTCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACt > 2:692872/1‑149 (MQ=255) acaTCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACt < 1:692872/149‑1 (MQ=255) aTCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGaa > 2:1529534/1‑150 (MQ=255) gCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCa < 2:1883812/119‑1 (MQ=255) gCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCa > 1:1883812/1‑119 (MQ=255) cAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATaaaa < 2:2011912/150‑1 (MQ=255) aGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAg > 1:139797/1‑150 (MQ=255) tGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATaaaa > 1:1373663/1‑145 (MQ=255) tGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATaaaa < 2:1373663/145‑1 (MQ=255) ggCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCTCCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTCAATAAATGATATTGaa < 2:580164/149‑1 (MQ=255) tgcagacgccgcGGCCAGGCG‑CGGGCCT‑GCCGCGGCGCCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAAc > 2:1953695/7‑150 (MQ=38) gCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAAc < 1:256642/150‑1 (MQ=255) gCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAAc < 2:2170598/150‑1 (MQ=255) ttGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGat > 2:1773550/1‑140 (MQ=255) ttGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGat < 1:1773550/140‑1 (MQ=255) gcgcCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGACTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGACCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTAt > 1:1463294/1‑150 (MQ=255) cgcgG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGTCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCttt < 1:823644/150‑1 (MQ=255) cgcgG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCttt < 1:2076401/150‑1 (MQ=255) cgcgG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCttt < 2:200728/150‑1 (MQ=255) gCC‑CGCGCCTTGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGa > 2:1059506/1‑150 (MQ=255) c‑cGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAAc > 1:1720164/1‑150 (MQ=255) ccttgCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTc < 1:1059506/146‑1 (MQ=255) ccTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTc < 2:1720164/150‑1 (MQ=255) cctgCCGCGGCGCCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCa < 1:1953695/147‑1 (MQ=255) cTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCtt > 1:1967755/1‑87 (MQ=255) cTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCtt < 2:1967755/87‑1 (MQ=255) cggcgTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTaaa < 1:219830/150‑1 (MQ=255) cggcgTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTaaa > 2:219830/1‑150 (MQ=255) cgTCTGCACGACTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGACCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGt < 2:1463294/150‑1 (MQ=255) tGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTcgc < 1:1368747/150‑1 (MQ=255) tGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATACTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTcgc > 1:225666/1‑150 (MQ=255) tGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGATGGCGCGTCTTCATGCACGCTTGAGCCCCCGCAATTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTcgc > 1:757910/1‑150 (MQ=255) cGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGa < 2:1944219/150‑1 (MQ=255) tACCTTGACCACCCCCAGCCCTCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAAc < 2:139797/150‑1 (MQ=255) tACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAAc > 1:1240871/1‑150 (MQ=255) cTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTAt > 1:676758/1‑150 (MQ=255) accaccaccAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTcc < 2:1190359/150‑1 (MQ=255) ccaccaccaGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATaaaa > 2:1491914/1‑85 (MQ=255) ccaccaccaGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATaaaa < 1:1491914/85‑1 (MQ=255) cacctGCACCCCAAAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTTAGCCCCCGCACTTCTCACTAAATAAAAGATATTGAACGGTATCTTTGTACTCGAATTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCtgtg < 1:2231296/150‑1 (MQ=255) caccaGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTAACATGAAAAGTTcga < 2:1738096/130‑2 (MQ=255) gccaGCACCCCGCAACTACTTGGGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTgtgt > 2:417363/2‑150 (MQ=255) ccaGCACCCCCCAAGTAGTTGCGGGGTACTTTCGCGTCTTCATGCACGATTGCGCCCCCGCAGCTGGCACGGAAGAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGtt < 1:1211472/150‑1 (MQ=255) caGCACCCCGCAACTACTTGGGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTcc > 2:222873/1‑142 (MQ=255) caGCACCCCGCAACTACTTGGGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTcc < 1:222873/142‑1 (MQ=255) aGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTa < 2:2265985/150‑1 (MQ=255) cccccAAGTAGTTGCGGGCTGCTGGCGAGTCTTCATGCACGCTCACGCGATGGCATTTGTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAATTCGCGGGATAACTATTTCTATGTGTGTATGaaa > 2:911040/1‑150 (MQ=255) cccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGAACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAACGTTCGCGGGATAACTATTTCCCTGTGTTTCTGAAAAg < 1:1418095/150‑1 (MQ=255) aaGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTAATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGaa > 1:317472/1‑150 (MQ=255) agtagtTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTaaaa > 2:703672/1‑109 (MQ=255) agtagtTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTaaaa < 1:703672/109‑1 (MQ=255) | CCGCCGCCGGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCC‑CGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAA > NC_002947/3030311‑3030607 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |