| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,033,588 | A→T | 6.7% | D29V (GAC→GTC) | PP_2646 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,033,588 | 0 | A | T | 6.7% | 316.6 / 13.1 | 106 | D29V (GAC→GTC) | PP_2646 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (56/42); new base T (4/3); total (60/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.71e-01 | |||||||||||
Only 100 of 109 total aligned reads displayed.
TGCGTGGTCGCCCAGGCCATGAAGACCCTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCAAGCAGGCCGAAC > NC_002947/3033440‑3033734 | tGCGTGGTCGCCCAGGCCATGAAGACCCTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGGTATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGgacgac > 2:1990972/1‑150 (MQ=255) ggTCGCCCAGGCCATGAAGACCCTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGGTATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTcca < 1:1990972/150‑1 (MQ=255) gTCGCCCAGGCCATGAAGACCCTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTccag > 1:34132/1‑150 (MQ=255) ggCCATGAAGACCCTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCAACACCCGGATCGGCCG‑CTGGCGCTGGACGTCGTccagggcctggcg > 1:1034323/1‑145 (MQ=25) cATGAAGACCCTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTccagcgccag > 1:2100611/1‑145 (MQ=255) cATGAAGACCCTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTccagcgccag < 2:2100611/145‑1 (MQ=255) gAAGACCCTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGAt > 2:547750/1‑150 (MQ=255) aGACCCTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATcc > 2:506567/1‑150 (MQ=255) aCCCTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCgg < 1:506567/150‑1 (MQ=255) ccTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGgt < 2:2216093/150‑1 (MQ=255) ctctATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACTCGGCGCTGCCGCCAGGCCCTGGACGACGTCCCGCGCCCGCCGCCGATCCGGgtg > 2:438499/1‑150 (MQ=255) ctctATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGgtg > 2:374424/1‑150 (MQ=255) ctctATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGgtg > 1:442472/1‑150 (MQ=255) ctctATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGgtg > 2:1477668/1‑150 (MQ=255) tctATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCCGCGGCCGATCCGGgtgt < 1:1247644/150‑1 (MQ=255) tctATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGgtgt < 2:2336063/150‑1 (MQ=255) cttatCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTg > 1:1249459/3‑150 (MQ=255) atatCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGa > 2:1547527/1‑150 (MQ=255) ccgccgTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCa < 1:962267/150‑1 (MQ=255) ccgTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACgg < 2:345821/150‑1 (MQ=255) cgTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGCTCCCCGGt < 2:34132/150‑1 (MQ=255) tCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGGCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCa < 2:442472/150‑1 (MQ=255) gTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCt < 1:1262838/150‑1 (MQ=255) ttCTGAGTGAGGCAAGTAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCTACTACTCCGACCCCCGGCGCTGCCGCCAGGCCCTGGACGGCGTGCAGCGCCAGCGGCCGATCCGGGTGTTGTTCCACGGTGGCAGCCAGTTTCtt < 2:204924/150‑1 (MQ=255) ttCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCtt > 2:125531/1‑150 (MQ=255) gAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTtggtg < 1:1729256/150‑1 (MQ=255) gAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTtggtg < 1:125531/150‑1 (MQ=255) gCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTggg > 1:1957417/1‑150 (MQ=255) aaGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGa > 1:428093/1‑114 (MQ=255) aGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGTCGTccagggc > 1:1645961/1‑88 (MQ=255) aGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGTCGTccagggc < 2:1645961/91‑1 (MQ=255) aGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATc > 1:809044/1‑103 (MQ=255) aGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATc < 2:809044/103‑1 (MQ=255) aGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGa < 1:261524/113‑1 (MQ=255) aGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGa > 2:261524/1‑113 (MQ=255) ggAGAGCAGATCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGaa > 2:866076/1‑150 (MQ=255) ggAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGaa < 1:438499/150‑1 (MQ=255) gagaGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACTCCGACACCCGGCGCTGCCGCCATGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCg < 1:286167/103‑1 (MQ=255) gagaGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCg > 2:286167/1‑103 (MQ=255) gagaGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGAGCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGaaa > 1:1675378/1‑150 (MQ=255) agagCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAg > 1:1065737/1‑150 (MQ=255) aGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTggg > 2:1647765/1‑150 (MQ=255) aCCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCAGCTCCGGGTGTTCATCGACGGGGGCAGCCAGTTTCTCGGTGGGGAAATCGAAAGCTGGgcg > 2:1093380/1‑150 (MQ=255) cATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTtggt > 1:1852796/1‑127 (MQ=255) cATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTtggt < 2:1852796/127‑1 (MQ=255) aTGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGgcgcgc > 1:2150545/1‑150 (MQ=255) aTGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGgcgcgc < 1:1547527/150‑1 (MQ=255) gAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTggg > 2:864264/1‑125 (MQ=255) gAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTggg < 1:864264/125‑1 (MQ=255) gTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCAt < 1:374424/150‑1 (MQ=255) tACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTtggt > 1:1346384/1‑119 (MQ=255) tACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTtggt < 2:1346384/119‑1 (MQ=255) tACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGGGCGCGAGCATg > 1:262392/1‑150 (MQ=255) aCTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATgg < 1:866076/150‑1 (MQ=255) tGATATGTGCAGGGCGCAACTACGCCGACACAAGCAGCTCTCGCACGGCGGTGGAGGACGTCCAGCGCCACCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGgcg > 1:406188/1‑150 (MQ=255) gATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGgcgc < 2:1957417/150‑1 (MQ=255) gATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGgcgc < 1:1647765/150‑1 (MQ=255) tatGTGCAGGGCGTAACGCCGCCGCCACCCGGCGCTCCTGCCAGCACCTGCGGGAGGCTCCGTGACATCGGCCGACTGGGGTGGTCATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCg < 2:2014743/150‑1 (MQ=255) tgCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTtg > 1:243578/1‑107 (MQ=255) tgCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTtg < 2:243578/107‑1 (MQ=255) gCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAGATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTg < 2:1249459/150‑1 (MQ=255) cAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTggg < 2:1104320/110‑1 (MQ=255) cAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGGGTTGATCCACGGTGGCAGCCAGTTTCTTGGTggg > 1:1104320/1‑110 (MQ=255) aGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTtg > 1:28745/1‑104 (MQ=255) aGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTtg < 2:28745/104‑1 (MQ=255) aCTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTAcc < 1:1141131/150‑1 (MQ=255) cTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTAccc > 1:1828392/1‑150 (MQ=255) gCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCa > 1:1922614/1‑150 (MQ=255) gCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTAGATCCCGGGTGGCAGCCAGTCACTTAGAGGGGAAATCGAAAGCTGGGCGCGCGAGCATAGCGCCGATCTGGTGCGTTACCCGCCa > 2:269980/1‑150 (MQ=255) cGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCaaa > 2:838768/1‑150 (MQ=255) gACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGAt > 1:121931/1‑65 (MQ=255) gACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGAt < 2:121931/65‑1 (MQ=255) gACACCCGGCGCTGACGCCAGGCCGTGGACGACGTCCAGCGCCAGAGGCCGATCCGGGTGTTGAGCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAAc < 2:228017/150‑1 (MQ=255) ccGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTggg < 2:656271/88‑1 (MQ=255) ccGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTggg > 1:656271/1‑88 (MQ=255) ccGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCa > 1:831757/1‑150 (MQ=255) ccGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCa > 2:1077956/1‑150 (MQ=255) ccGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCa > 1:2103914/1‑150 (MQ=255) ccGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCa < 1:838768/150‑1 (MQ=255) tGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCAc > 1:1189747/1‑150 (MQ=255) gccgccAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCa > 1:1938897/1‑63 (MQ=255) gccgccAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCa < 2:1938897/63‑1 (MQ=255) cgccAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTAcc > 1:34139/1‑127 (MQ=255) cgccAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTAcc < 2:34139/127‑1 (MQ=255) cgccAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCaaa > 2:314064/1‑134 (MQ=255) cgccAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGc > 1:312462/1‑150 (MQ=255) gccAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTCTCTTGGGGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCa > 2:793150/1‑150 (MQ=255) tggcgcTGGACGTCGTCCAGGGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGt > 1:538318/6‑115 (MQ=255) tggcgcTGGACGTCGTCCAGGGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGt < 2:538318/110‑1 (MQ=255) gcTGGACGTCGTCCAGGGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTgggg < 1:1263310/70‑1 (MQ=39) gcTGGACGTCGTCCAGGGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTgggg > 2:1263310/2‑71 (MQ=39) ccTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCt < 2:167003/63‑1 (MQ=255) ccTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCt > 1:167003/1‑63 (MQ=255) ccTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCAAGCAGGc > 1:265550/1‑150 (MQ=255) ccTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCAAGCAGGc < 2:1922614/150‑1 (MQ=255) cTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCAAGCAGGcc > 2:1444662/1‑150 (MQ=255) cTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCAAGCAGGcc > 2:2136776/1‑150 (MQ=255) tGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGCCCCGCGTATGCGTGAGCATGGCGCCGATCTGGTGAGTTCGCCAGCGGACAGCCAGGACCACGGCAAGCAGGCCg > 1:43078/1‑150 (MQ=255) gacgacGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCAAGCAGGCCGaa > 2:1916663/1‑150 (MQ=255) acgacgTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCAAGCAGGCCGAAc > 2:1857243/1‑150 (MQ=255) | TGCGTGGTCGCCCAGGCCATGAAGACCCTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCCAGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCAAGCAGGCCGAAC > NC_002947/3033440‑3033734 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |