| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,048,633 | A→G | 7.9% | intergenic (+45/‑251) | PP_2661 → / → PP_2662 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,048,633 | 0 | A | G | 7.9% | 243.9 / 8.9 | 88 | intergenic (+45/‑251) | PP_2661/PP_2662 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (37/44); new base G (2/5); total (39/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.92e-01 | |||||||||||
AAGGTGAAGGACGCGGTGGTGGATGTGCAGGCACGGCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTACCC > NC_002947/3048484‑3048779 | aaGGTGAAGGACGCGGTGGTGGATGTGCAGGCACGGCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCa < 2:404472/150‑1 (MQ=255)aaGGTGAAGGACGCGGTGGTGGATGTGCAGGCACGGCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCa < 2:1448115/150‑1 (MQ=255) ggTGAAGAACGCGGTGGTGGACGTCCAAGCACAGCGGGCCGCACAGCAACCGCACCGGTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGc > 2:2019703/1‑150 (MQ=255) tGAAGGACGCGGTGGTGGATGTGCAGGCACGGCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGccc > 1:77810/1‑150 (MQ=255) gAAGGACGCGGTGGTGGATGTGCAGGCACGGCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTGCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCt > 2:1090563/1‑150 (MQ=255) gAAGGACGCGGTGGTGGATGTGCAGGCACGGCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCt > 1:288754/1‑150 (MQ=255) gcgGTGGTGGATGTGCAGGCACGGCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCggg < 1:1072919/150‑1 (MQ=255) gcgGTGGTGGATGTGCAGGCACGGCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCggg > 2:2001866/1‑150 (MQ=255) cgGTGGTGGATGTGCAGGCACGGCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGc < 2:972315/150‑1 (MQ=255) cgGTGGTGGATGTGCAGGCACGGCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGc < 2:783065/150‑1 (MQ=255) ggtggtGGATGTGCAGGCACGGCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTT‑CTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCCGCCTTGCGGCCCTTCGCGGGctc < 1:1172484/150‑3 (MQ=255) ggtggATGTGCAGGCACGGCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGctcgc < 1:1111543/150‑5 (MQ=255) gtggATGTGCAGGCACGGCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGcc > 2:250627/1‑150 (MQ=255) aTGTGCAGGCACGGCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCTCGCCcgcg < 2:77810/150‑1 (MQ=255) tgtgCAGGCACGGCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGa > 2:1154651/1‑150 (MQ=255) gtgCAGGCACGGCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCTGGCTCGCCCGCGaa < 1:1090563/150‑1 (MQ=255) gtgCAGGCACGGCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCTCGGCCGCGaa < 2:1966266/150‑1 (MQ=255) gtgCAGGCACGGCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGaa < 1:1587115/150‑1 (MQ=255) gtgCAGGCACGGCTGGCCTGGCAGCAACCGCACCGTTATGAAATCCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCTCGCCCGCGaa < 2:1688651/150‑1 (MQ=255) tgCAGGCACGGCTGGCCTGGCAGCAACCGGACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAg < 2:741881/150‑1 (MQ=255) tgCAGGCACGGCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCGGCCCTTCGCGGGCTCGCCCGCGAAg < 1:168337/150‑1 (MQ=255) gCACGGCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCg < 2:322098/150‑1 (MQ=255) tggcctggcAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCGGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAggcg > 1:509622/1‑150 (MQ=255) ggcctggcAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCGGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAggcgg < 2:509622/150‑1 (MQ=255) gcctggcAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAggcggc < 1:1718306/150‑1 (MQ=255) gcctggcAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCCGCCTTGCGGCCCTTCGCGGGCTCGCCCGCGAAGGGCTGCaaagcagc < 1:598503/150‑7 (MQ=25) gcctggcAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTAAGATAATGTAATTGGGGCTGCTTTGCGGCCCTTCGCGGGCTCGCCCGCGAAg < 2:2336154/136‑1 (MQ=255) gcctggcAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTAAGATAATGTAATTGGGGCTGCTTTGCGGCCCTTCGCGGGCTCGCCCGCGAAg > 1:2336154/1‑136 (MQ=255) aaCCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCCTTGCGGCCCTTCGCGGGCTCGCCCGCGAAg < 2:1947151/126‑1 (MQ=38) aaCCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCCTTGCGGCCCTTCGCGGGCTCGCCCGCGAAg > 1:1947151/1‑126 (MQ=38) aCCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGttcatt < 1:2181174/150‑1 (MQ=255) ccGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGttcattc > 2:339441/1‑150 (MQ=255) cGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGttcattca > 1:461940/1‑150 (MQ=255) cagcGTTATGAAATGCCCGCTTGCCAGCGTTCGAAGGCTCTGGCTCACTGGAGCCAGGAGATTCCGCTAAGATAGTGTAATTGGGGCTGCTTTCCAGCCCTGCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAAt < 2:1719199/147‑1 (MQ=255) cACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAAt < 1:339441/150‑1 (MQ=255) gTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCa > 1:2146128/1‑92 (MQ=255) gTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCa < 2:2146128/92‑1 (MQ=255) tATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTAtt < 1:685891/150‑1 (MQ=255) tGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGa > 2:2004618/1‑103 (MQ=255) tGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGa < 1:2004618/103‑1 (MQ=255) gCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCg > 2:1060006/1‑150 (MQ=255) ccGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGcc > 1:1081033/1‑150 (MQ=255) cGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCTCGCCcgcg < 2:2145291/101‑1 (MQ=255) cGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCTCGCCcgcg > 1:2145291/1‑101 (MQ=255) cAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAggcggc > 1:1441949/1‑111 (MQ=255) cAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAggcggc < 2:1441949/111‑1 (MQ=255) cAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTc > 2:668666/1‑150 (MQ=255) gagcgacggCAGTGGCTTCCTGAAGCCAGGATATTCCGCTGAGATAATGTAATTGGGGCTGCTTTGTAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTcctgc < 1:977686/143‑1 (MQ=255) cAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGcc > 1:2162988/1‑81 (MQ=255) cAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGcc < 2:2162988/81‑1 (MQ=255) gCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCa > 2:1234391/1‑150 (MQ=255) aCTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTcctgc > 1:659525/1‑140 (MQ=255) aCTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTcctgc < 2:659525/140‑1 (MQ=255) cTGGCTTCAGGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATaa > 2:1140970/1‑150 (MQ=255) tGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAg > 1:360325/1‑150 (MQ=255) tGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAg > 2:1588191/1‑150 (MQ=255) gCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGtc > 2:2324299/1‑150 (MQ=255) ttcaggAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTGCTTCCTGAGCAATAAGtctg > 2:939017/6‑149 (MQ=255) ttCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGtctc < 1:1638639/150‑1 (MQ=255) cTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGCAGGGCAGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGaa > 1:156755/1‑150 (MQ=255) cTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGaa > 1:1761562/1‑150 (MQ=255) tGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAAc > 2:1118849/1‑150 (MQ=255) gAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAAcc < 1:2001866/150‑1 (MQ=255) ccAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGa < 1:2019703/150‑1 (MQ=255) ccAGGAGATTCCGCCCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGa < 2:2074461/150‑1 (MQ=255) ggAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGAccc < 1:1154651/150‑1 (MQ=255) aTTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTAt < 1:1347413/95‑1 (MQ=255) aTTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTAt > 2:1347413/1‑95 (MQ=255) ttCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCa < 2:430378/150‑1 (MQ=255) ttCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCa < 1:250627/150‑1 (MQ=255) tCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGttca < 2:1203066/77‑1 (MQ=255) tCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGttca > 1:1203066/1‑77 (MQ=255) cAGATAATGTCATTGGGTCTGCTTTGCAGCCCTGCGCGGCCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCg < 2:461940/150‑1 (MQ=255) cAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCAGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCg < 2:156755/150‑1 (MQ=255) aGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCgg < 2:360325/150‑1 (MQ=255) aGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTAACgg > 1:217290/1‑150 (MQ=255) aGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAAACCGCGAAGGGCCGCAAGGCTCCACCGGTTCATTCAATCGTATTGATAAACGCATGACCCCCCTGCCTGAGCCATAAATCTCGAACCAGGACCCAAGCAGGTACCgg > 2:1586012/1‑150 (MQ=255) tAATGTAGTTGGGGCTGCTTTGCAGCCCTTCGGGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATCCCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGAc < 2:37428/150‑1 (MQ=255) tAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGAc < 1:2324299/150‑1 (MQ=255) aaTGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAggcggc > 2:1398542/1‑62 (MQ=255) aaTGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAggcggc < 1:1398542/62‑1 (MQ=255) tAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAAt < 1:1118849/150‑1 (MQ=255) ggggCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATCACCg < 1:1234391/150‑1 (MQ=255) gggCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATCACCgg > 1:878148/1‑150 (MQ=255) gggCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATCACCgg < 1:1060006/150‑1 (MQ=255) ggCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATCACCggg > 1:510243/1‑150 (MQ=255) ctgctTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATCACCGGGcc > 2:363917/1‑150 (MQ=255) gctTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGa > 1:36241/1‑108 (MQ=255) gctTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGa < 2:36241/108‑1 (MQ=255) tGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTAccc < 2:878148/150‑1 (MQ=255) gCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGAc < 1:756908/111‑1 (MQ=255) gCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGAc > 2:756908/1‑111 (MQ=255) | AAGGTGAAGGACGCGGTGGTGGATGTGCAGGCACGGCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTACCC > NC_002947/3048484‑3048779 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |