| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,079,678 | C→T | 6.2% | intergenic (‑370/+64) | PP_2688 ← / ← PP_2689 | hypothetical protein/endoribonuclease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,079,678 | 0 | C | T | 6.2% | 232.3 / 4.4 | 80 | intergenic (‑370/+64) | PP_2688/PP_2689 | hypothetical protein/endoribonuclease |
| Reads supporting (aligned to +/- strand): ref base C (34/41); new base T (3/2); total (37/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.46e-01 | |||||||||||
CCTGGCCGCAAGGGCCGGCGCATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTGGGGTAGG > NC_002947/3079530‑3079827 | ccTGGCCGCAAGGGCCGGCGCATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAgcg > 2:2156617/1‑150 (MQ=255) tGGCCGCAAGGGCCGGCGCATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGcgcc < 1:1025944/150‑1 (MQ=255) ccGCAAGGGCCGGCGCATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGAGGGTCGGAGGGGGCATGCATCGAgcggcggg > 1:1072219/1‑148 (MQ=255) aGGGCCGGCGCATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGCGCGGAGGGGGCATGCATCGAGCGCCGCgcgggc < 1:2002543/150‑1 (MQ=255) aTCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGGGCATGACGTGGGGCGGAGGGGGCAGGCATCGAGCGCCGCGCGGGCGGCACTCGAtt > 1:921473/1‑150 (MQ=255) aaaaaaGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTgcg > 2:923314/1‑150 (MQ=255) aaaaaaGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTgc > 2:2265117/1‑149 (MQ=255) aaaaaaGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTgc < 1:2265117/149‑1 (MQ=255) aaaaGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGcgcg > 2:1947527/1‑150 (MQ=255) ttttGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGTGCCGCCCGCGCGGCGCTCGAt < 1:577831/134‑1 (MQ=255) ttttGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGTGCCGCCCGCGCGGCGCTCGAt > 2:577831/1‑134 (MQ=255) ttttGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAat > 1:837903/1‑150 (MQ=255) tGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATc < 1:119579/150‑1 (MQ=255) gACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCg > 2:1723391/1‑150 (MQ=255) aCCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGt > 1:2085177/1‑150 (MQ=255) cccGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTg < 2:748076/150‑1 (MQ=255) ccGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGTCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCGTGCGTCGGGCGCAGGGCGTGGGGCATGGGGTTGGGCGAACGCTGAATATCGTga < 1:1460752/150‑1 (MQ=255) ccGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGGGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACTCTTAAGATCGTga < 2:921473/150‑1 (MQ=255) gcgcGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGCAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACg < 1:2260930/150‑1 (MQ=255) ggcgGGTTTTGAAGCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACgg < 2:1382153/149‑1 (MQ=255) cgcgGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACgg < 2:1382182/150‑1 (MQ=255) ttGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTc > 1:2197500/1‑150 (MQ=255) tGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCa < 1:1540870/150‑1 (MQ=255) tGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCa < 2:804606/150‑1 (MQ=255) gAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAg < 2:2197500/150‑1 (MQ=255) gAACCGAAAGGGGGCGCAGGCCGGTGCCTGGCGGGACACATAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAg < 1:491121/150‑1 (MQ=255) aaCCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGTGCCGCCCGcgcggc > 2:1652534/1‑104 (MQ=255) aaCCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGTGCCGCCCGcgcggc < 1:1652534/104‑1 (MQ=255) aCCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAGAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTc > 2:2217843/1‑107 (MQ=255) aCCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAGAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTc < 1:2217843/107‑1 (MQ=255) aCCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAggg < 1:1947527/150‑1 (MQ=255) ccGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCTGCACTCGATTACACCATTTCTGAATATCGTGAGACGGGCGCCTTCAGGGc > 2:553121/1‑150 (MQ=255) gAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGt > 1:640688/1‑150 (MQ=255) aaaaTGGGGCGCAGGGCGGTGCATGGAGAGAAAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGt < 2:1683098/149‑1 (MQ=255) ggCGCCGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGAAGTGGGGCAGCAAAGGAATCCTTCTGTCGCCCCGCGGCCGGAACTCGATCCCGCGACAGATGACTATCGTGAGACGGGCGCCTTCAGGGCGTCAGaggc < 1:2280195/150‑1 (MQ=255) ggCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGaggc > 2:2280195/1‑150 (MQ=255) gcgcAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTg < 2:2111132/121‑1 (MQ=255) gcgcAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTg > 1:2111132/1‑121 (MQ=255) gcgcAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGaggca < 1:1723391/150‑1 (MQ=255) cgcAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGaggcag < 2:792477/150‑1 (MQ=255) gcAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGaggcagg > 1:2097203/1‑150 (MQ=255) gcgggTGGCTGGCGGGAGAAAAAGGGAGTATTCCGGGGGCATGCCGTGGGGCGGAGGGGGCATGCATCGAGCGCCGAGCGGGCGGCACTAGATTGCGAGAACGCTGAATATCGTGAGCCGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTa < 2:1072219/147‑1 (MQ=255) ggTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGTCGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGac < 2:1938377/150‑1 (MQ=255) gTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGacc < 2:2085177/150‑1 (MQ=255) gCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGaccac < 2:640688/150‑1 (MQ=255) gCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTAGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGtt > 2:1847927/1‑150 (MQ=255) gggAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAg > 1:1865266/1‑138 (MQ=255) gggAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAg < 2:1865266/138‑1 (MQ=255) gaAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTccacca < 2:2228779/150‑1 (MQ=255) aaaaaGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGAccacca < 1:896251/140‑1 (MQ=255) aaaaaGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGAccacca > 2:896251/1‑140 (MQ=255) aaaGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGt > 1:2168536/1‑94 (MQ=255) aaaGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGt < 2:2168536/94‑1 (MQ=255) aGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCAAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACGACCAGTTCCACCAGCAtt > 2:442947/1‑150 (MQ=255) gggAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGTCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCAttt > 2:4335/1‑150 (MQ=255) gggAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGt > 2:1620888/1‑91 (MQ=255) gggAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGt < 1:1620888/91‑1 (MQ=255) gAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATttct > 2:1591846/1‑150 (MQ=255) gAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATttct > 2:1991866/1‑150 (MQ=255) aGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGTGGCACTCGATTGCGCGAACGCTGAATATCGTGAGATGGGCGCCTTCAGGGCGTCAGCGGCAGGCGTAGACCACCCGTTACACCACCATttctt > 2:550597/1‑150 (MQ=255) gTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATttcttc < 1:923314/150‑1 (MQ=255) ttCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCg < 1:271354/150‑1 (MQ=255) ccGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGc < 1:524448/102‑1 (MQ=255) ccGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGc > 2:524448/1‑102 (MQ=255) cGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAg > 2:2169563/1‑98 (MQ=255) cGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAg < 1:2169563/98‑1 (MQ=255) gggTGCATGACGGGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCg < 2:738334/150‑1 (MQ=255) cATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAg < 1:1470385/92‑1 (MQ=255) cATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAg > 2:1470385/1‑92 (MQ=255) gTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGccac < 1:1991866/150‑1 (MQ=255) ggCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCcgcg > 2:781294/1‑150 (MQ=255) atgcatCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCgg > 2:2320145/1‑150 (MQ=255) gcatCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCg > 1:1078933/1‑50 (MQ=255) gcatCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCg < 2:1078933/50‑1 (MQ=255) gcatCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAg < 2:2279829/68‑1 (MQ=255) gcatCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAg > 1:2279829/1‑68 (MQ=255) catCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCcgc > 2:1375577/1‑143 (MQ=255) catCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCcgc < 1:1375577/143‑1 (MQ=255) atCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCGCCAGTTCCACCAGCATTTCTTCCTGGGCTAGGCCAGCCACCACTACGGCCGCGCGGTTgg < 1:553121/150‑1 (MQ=255) atCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAg > 2:56311/1‑94 (MQ=255) atCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAg < 1:56311/94‑1 (MQ=255) atCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGAGCGCCTTCAGGGCGTCAGAGCCAGGCGTAGCCCACCAGTACCACCCGCATTTCTTCCCGGGCGAGGCCAGCCCCCCCTACGACTGAGCGGGTgg > 2:324884/1‑150 (MQ=255) tCGAGTGCCGCCCGCGCGGCGCTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTggg > 1:33273/1‑150 (MQ=255) cgccgcGGAGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTGGGGTAgg < 1:850147/150‑1 (MQ=255) | CCTGGCCGCAAGGGCCGGCGCATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTGGGGTAGG > NC_002947/3079530‑3079827 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |