| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 325,161 | C→G | 5.1% | P149A (CCA→GCA) | oprQ → | outer‑membrane porin D |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 325,161 | 0 | C | G | 5.1% | 281.9 / 4.2 | 90 | P149A (CCA→GCA) | oprQ | outer‑membrane porin D |
| Reads supporting (aligned to +/- strand): ref base C (37/47); new base G (2/3); total (39/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTGGCGGCGTCGACTTCTTCAAGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAGAGCGCCGAGCGCCGTGATGGTGGTGGC > NC_002947/325012‑325310 | gtggCGGCGTCGACTTCTTCAAGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGc < 2:1103703/150‑1 (MQ=255)gtggCGGCGTCGACTTCTTCAAGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGc < 1:1058792/150‑1 (MQ=255) tggCGGCGTCGACTTCTTCAAGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGcc < 1:2023642/150‑1 (MQ=255) cgTCGACTTCTTCAAGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGtgct < 2:66289/150‑1 (MQ=255) tCGACTTCTTCAAGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGGCAGtgctgg < 2:837848/150‑2 (MQ=255) tCGACTTCTTCAAGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGtgctgc < 2:820969/150‑1 (MQ=255) cGACTTCTTCAAGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCa < 2:617280/150‑1 (MQ=255) ttcttcAAGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGGGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGGACGATGACCAGATGCCAGCACTGCCAGTGCTGCAGTac > 1:1653475/1‑150 (MQ=255) ttctgcAAGCCGCACGAAACCACCAATGCCGAAGCCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCCGATGCCAGCACTGCTAGCGCTGCAGTac > 2:26868/1‑150 (MQ=255) aaGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGT‑GTCGTGCATGTGAAGTTCCGCATTTCCAACATCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGAt < 1:1571213/150‑1 (MQ=255) gCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGGCAGtgctg > 1:1649172/1‑136 (MQ=255) gCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGGCAGtgctg < 2:1649172/136‑1 (MQ=255) ccGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCa < 1:136167/150‑1 (MQ=255) gAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGTCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTctg > 2:736637/1‑150 (MQ=255) gAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATg > 2:1854189/1‑142 (MQ=255) gAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATg < 1:1854189/142‑1 (MQ=255) gAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTctg > 1:1379260/1‑150 (MQ=255) gAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTctg > 1:1188908/1‑150 (MQ=255) ccaccaATGCCGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCtgctgc < 2:1924103/150‑1 (MQ=255) accaATGCCGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCAAGCCCTGCCAGTGCTGCAGTACGTCAATGCACGTCTGCTTccg > 2:504626/1‑149 (MQ=255) tGCCGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAg < 2:1029010/150‑1 (MQ=255) gCCGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGc < 1:749290/150‑1 (MQ=255) cGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCtt > 2:1512876/1‑150 (MQ=255) cAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCgg > 2:2182649/1‑150 (MQ=255) aaCGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGc > 2:76831/1‑150 (MQ=255) aCGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCa < 1:1512876/150‑1 (MQ=255) ccAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCAccc < 1:26868/150‑1 (MQ=255) cAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCt > 1:640059/1‑150 (MQ=255) aGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCCCCGGCACCCTg < 1:1175484/150‑1 (MQ=255) gccgcACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGGCAGtgctgg > 2:857323/1‑97 (MQ=255) gccgcACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTCGCGCCAATGCATTCATGCGCTGAAGTACGGTTTCCAGATGCAAGCACTGCCAATACGCCAGGACGGGTATCCGCGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCAc > 1:1797838/1‑150 (MQ=255) gccgcACAACCTGGCGCGTGGTGGGGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGGCAGtgctgg < 1:857323/98‑2 (MQ=255) gccgcACAACCCGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGCCGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTTATCAc < 2:212734/150‑1 (MQ=255) ccgcACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCAcc < 1:2182649/150‑1 (MQ=255) gcACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTc > 1:1842591/1‑150 (MQ=255) cacaACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTcc < 1:1842400/150‑1 (MQ=255) aaCCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCaaa < 2:1912154/150‑1 (MQ=255) aaCCTAGCGCGTCGTGGTGCTGC‑TGTGAAGTTCCGAATTTCCACCCGCGTGCTGAAGTACGGTAACCAGATGCCAGCACTACCAATGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCaaa < 2:1653475/150‑1 (MQ=255) aCCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAag < 2:1188908/150‑1 (MQ=255) cTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTctgct > 2:1626077/1‑110 (MQ=255) cTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTctgct < 1:1626077/110‑1 (MQ=255) gcgcGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCATATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTctgc < 2:1696724/106‑1 (MQ=255) gcgcGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTctgc > 1:1696724/1‑106 (MQ=255) gcgcGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATc < 1:472978/150‑1 (MQ=255) gcgTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCa < 1:421744/150‑1 (MQ=255) gcgTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCa < 1:421623/150‑1 (MQ=255) ggtggtgCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGc < 2:447597/150‑1 (MQ=255) ggtgCTGC‑TGTGATGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTg < 1:275995/150‑1 (MQ=255) gtgCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATg < 1:2036782/87‑1 (MQ=255) gtgCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATg > 2:2036782/1‑87 (MQ=255) gtgCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCaaa > 2:1923897/1‑134 (MQ=255) gtgCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCaaa < 1:1923897/134‑1 (MQ=255) ctgc‑tgTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAAc < 2:1965746/150‑1 (MQ=255) tgc‑tgTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCa > 1:613648/1‑72 (MQ=255) tgc‑tgTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCa < 2:613648/72‑1 (MQ=255) tgc‑tgTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACt > 2:927652/1‑150 (MQ=255) c‑tgTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGa > 1:530375/1‑150 (MQ=255) gtgAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCa < 2:1385794/134‑1 (MQ=255) gtgAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCa > 1:1385794/1‑134 (MQ=255) gtgAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAAc < 1:695744/150‑1 (MQ=255) tgAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACg > 1:182646/1‑150 (MQ=255) aaGTTCCGCATCTCCAACACCAACCTAACCTAAGGTGACCAGATGCCAGCACGGCCATTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACgcc > 2:1194895/1‑150 (MQ=255) aGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATc > 1:792987/1‑128 (MQ=255) aGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATc < 2:792987/128‑1 (MQ=255) ttCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACgcccgc > 2:179381/1‑150 (MQ=255) gCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAag > 2:243480/1‑117 (MQ=255) gCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAag < 1:243480/117‑1 (MQ=255) gCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCt > 2:1296569/1‑150 (MQ=255) gCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCt < 1:1603549/150‑1 (MQ=255) gCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCt > 2:1127885/1‑150 (MQ=255) tttCCAACACCGTGCTGAAGTACGGTGACCAGATGTCAGCACTGCCAGTGCTGCAGTACGACGATGGACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCa < 1:736637/150‑1 (MQ=255) ttCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCAc < 2:1546556/150‑1 (MQ=255) ttCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCAGCtctac > 2:376354/1‑146 (MQ=255) cAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTc > 1:834821/1‑85 (MQ=255) cAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTc < 2:834821/85‑1 (MQ=255) cAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCa > 1:2225821/1‑150 (MQ=255) acCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGaa > 2:1692657/1‑150 (MQ=255) cGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAgc < 2:530375/150‑1 (MQ=255) tGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCa > 2:1088031/1‑142 (MQ=255) tGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCa < 1:1088031/142‑1 (MQ=255) gCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAgcgcg < 1:1296569/150‑1 (MQ=255) cGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAgagcgc > 1:993898/1‑150 (MQ=255) tGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAgagcgccga < 2:228756/150‑1 (MQ=255) tGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAgagcgccga < 1:618238/150‑1 (MQ=255) tGACCAGATGCAAGCACTGTCAGTGCCGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAgagcgccga < 2:1124201/150‑1 (MQ=255) aCCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAACCGATCCAGGGCCGGGAACTTAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAgagcgccgagc < 1:1213904/150‑1 (MQ=255) cAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAGAGCGCCGAGCGCCGTGAtg < 2:640059/150‑1 (MQ=255) aGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAGAGCGCCGAGCGCCGTGAtgg > 2:524550/1‑150 (MQ=255) cACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAGAGCGCCGAGCGCCGTGAtggtg < 2:1842591/150‑1 (MQ=255) cTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCAc < 2:121003/50‑1 (MQ=255) cTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCAc > 1:121003/1‑50 (MQ=255) tGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACTGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAGAGCGCCGAGCGCCGTGAtggtggtg < 1:512703/150‑1 (MQ=255) tGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAGAGCGCCGAGCGCCGTGAtggtggtg > 2:1757838/1‑150 (MQ=255) ccAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAgcgcg < 2:651451/119‑1 (MQ=255) ccAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAgcgcg > 1:651451/1‑119 (MQ=255) ccAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAGAGCGCCGAGCGCCGTGATGGTGGTGGc > 1:487282/1‑150 (MQ=255) | GTGGCGGCGTCGACTTCTTCAAGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACAACCTGGCGCGTGGTGGTGCTGC‑TGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAGAGCGCCGAGCGCCGTGATGGTGGTGGC > NC_002947/325012‑325310 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |