| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,861,202 | C→A | 5.2% | R27R (CGC→CGA) | PP_3413 → | two‑component system sensor histidine kinase/response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,861,202 | 0 | C | A | 5.2% | 246.2 / 2.1 | 77 | R27R (CGC→CGA) | PP_3413 | two‑component system sensor histidine kinase/response regulator |
| Reads supporting (aligned to +/- strand): ref base C (41/32); new base A (2/2); total (43/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.67e-01 | |||||||||||
AGACCGAGTCACTGGTGGAAATGGTCGACCTGGCCAAGCGCAACAGCGTCTATTGAGCGCTCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGA > NC_002947/3861053‑3861348 | aGACCGAGTCACTGGTGGAAATGGTCGACCTGGCCAAGCGCAACAGCGTCTATTGAGCGCTCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGc < 1:2024694/150‑1 (MQ=255) aGTCACTGGTGGAAATGGTCGACCTGGCCAAGCGCAACAGCGTCTATTGAGCGCTCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATctg > 1:851657/1‑150 (MQ=255) aGTCACTGGAGGAAATGGTCGACCTGGCCAAGCGCAACAGCGTCTATTGAGCGCTCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATctg > 1:2069988/1‑150 (MQ=255) cACTGGTGGAAATGGTCGACCTGGCCAAGCGCAACAGCGTCTATTGAGCGCTCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATctgctg < 1:1409818/150‑1 (MQ=255) aCTGGTGGAAATGGTCGACCTGGCCAAGCGCAACAGCGTCTATTGAGCGCTCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTgg > 1:1957168/1‑150 (MQ=255) cTGGTGGAAATGGTCGACCTGGCCAAGCGCAACAGCGTCTATTGAGCGCTCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGgc < 1:702289/150‑1 (MQ=255) tggAAATGGTCGACCTGGCCAAGCGCAACAGCGTCTATTGAGCGCTCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAAGTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGgcgcgc > 2:1564241/1‑150 (MQ=255) aTGGTCGACCTGGCCAAGCGCAACAGCGTCTATTGAGCGCTCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGAt > 1:1360889/1‑150 (MQ=255) tGGTCGACCTGGCCAAGCGCAACAGCGTCTATTGAGCGCTCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATc < 2:2069988/150‑1 (MQ=255) gTCGACCTGGCCAAGCGCAACAGCGTCTATTGAGCGCTCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAg > 2:928986/1‑150 (MQ=255) gTCGACCTGGCCAAGCGCAACAGCGTCTATTGAGCGCTCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAg > 1:487236/1‑150 (MQ=255) gCCAAGCGCAACAGCGTCTATTGAGCGCTCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGAGCTCTATCTGTGCCGCTGc < 2:688906/150‑1 (MQ=255) gCCAAGCGCAACAGCGTCTATTGAGCGCTCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGAAGGCAAAA‑CGTGAACCACGCCAACGTCTGGCGCGCGCGTGCAGTGCCGCTGc > 2:1777101/1‑150 (MQ=255) gTCTATTGAGCGCTCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATc > 1:1268188/1‑150 (MQ=255) tATTGACCGCTCTGCTACCATGAAAGAGTATCAGGCGGGCGTCCTTCTGCCTATCGGTCTTGCCAAAAACACGGAACTGCAGGCCAGC‑AGTAAACCACACCATCTGTTGGCGCGGTCGAACAGTGGCGCTGCCCGACTGAAGTTATccag > 2:517168/1‑148 (MQ=255) tGAGCGCTCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCga < 2:1268188/150‑1 (MQ=255) tGAGCGCTCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCga < 2:2290880/150‑1 (MQ=255) gcTCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGc > 2:301216/1‑118 (MQ=255) gcTCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGc < 1:301216/118‑1 (MQ=255) gcTCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATc > 2:1515902/1‑150 (MQ=255) tCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGa > 2:173690/1‑109 (MQ=255) tCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGa < 1:173690/109‑1 (MQ=255) tCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCTCTGACGTTATCCGGCGATGATCGc < 1:1594073/150‑1 (MQ=255) tGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTTACGTTATCCGGCGATGATCGCCACTg > 2:821229/1‑150 (MQ=255) cATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCt < 1:1564241/150‑1 (MQ=255) aaaCAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCCCGATCAGTGCCGCTGCCCCACTGCCGTTATCCGGCGATGATCGCCACTGGCTGaaa > 2:659513/1‑150 (MQ=255) aGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAaacaac > 1:1426927/1‑150 (MQ=255) ttGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCTACTGGCTGAAACAAcgc < 1:1940400/150‑1 (MQ=255) tGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCCCGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAAc > 1:1980206/1‑150 (MQ=255) cGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCAATGGCTGAAGCAACGCGAACGCCTGGt > 1:273746/1‑150 (MQ=255) tCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTaa > 2:1420685/1‑150 (MQ=255) cTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATg > 1:455652/1‑150 (MQ=255) ttCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATgg > 1:1662189/1‑150 (MQ=255) ttCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATgg > 1:188972/1‑150 (MQ=255) tCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTTACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATggg < 1:821229/150‑1 (MQ=255) tCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAAAAACGCGAAAGCCTGATAATggg < 2:1744337/150‑1 (MQ=255) tGGCTATCGGTCTGGCCAACTCCACGGAACTGCA‑GCCAGCGAGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCa < 1:1777101/150‑1 (MQ=255) ggCTATCGGTCTGGCCAACTCTACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAg < 2:538360/150‑1 (MQ=255) gCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGc > 2:2060748/1‑111 (MQ=255) gCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGc < 1:2060748/111‑1 (MQ=255) gCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGACATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGt > 2:587836/1‑150 (MQ=255) gCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGACATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGt > 2:586502/1‑150 (MQ=255) tATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTgc > 1:1883525/1‑150 (MQ=255) cTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGcccc < 1:1515902/150‑1 (MQ=255) tGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATgg > 1:335395/1‑135 (MQ=255) tGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATgg < 2:335395/135‑1 (MQ=255) tGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGt < 1:922155/140‑1 (MQ=255) tGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGt > 2:922155/1‑140 (MQ=255) ccAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATggg > 2:666741/1‑133 (MQ=255) ccAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATggg < 1:666741/133‑1 (MQ=255) tCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTAcccc < 2:1360889/150‑1 (MQ=255) tCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTAcccc > 1:1428682/1‑150 (MQ=255) cACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTAcccccc > 2:1473589/1‑150 (MQ=255) cACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTAcccccc > 1:1948020/1‑150 (MQ=255) ggAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCCATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGtt < 1:646184/150‑1 (MQ=255) gAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTc < 1:68746/150‑1 (MQ=255) gAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTc < 2:455652/150‑1 (MQ=255) tGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACg < 2:1554261/106‑1 (MQ=255) tGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACg > 1:1554261/1‑106 (MQ=255) tGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGaaa > 2:1033149/1‑150 (MQ=255) tGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGCCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGaaa < 2:851657/150‑1 (MQ=255) gCAGGCCAGC‑AGTGAACCACGACATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAAt < 1:587836/150‑1 (MQ=255) gCAGGCCAGC‑AGTGAACCACGACATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAAt < 1:586502/150‑1 (MQ=255) gCCAGC‑AGAGAACCACGCCATCTGCTGGCGAGCTCGCACCGTCACCCAGTCGCTGTGACGTTATCCGGCGATGAGCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAAc > 1:45191/1‑150 (MQ=255) cagc‑agTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTgg < 2:2046502/104‑1 (MQ=255) cagc‑agTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTgg > 1:2046502/1‑104 (MQ=255) cagc‑agTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTg < 1:1326200/103‑1 (MQ=255) cagc‑agTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTg > 2:1326200/1‑103 (MQ=255) cagc‑agTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGt < 1:1473589/150‑1 (MQ=255) agTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTcagc < 1:928986/150‑1 (MQ=255) tGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATCACCCCCCGTTCGAAATCAACGTcagcca > 2:192988/1‑150 (MQ=255) aaCCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTcagccagc > 1:2294410/1‑150 (MQ=255) aCCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGAt > 1:930496/1‑118 (MQ=255) aCCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGAt < 2:930496/118‑1 (MQ=255) ccACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCAt > 1:2127602/1‑150 (MQ=255) aCGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCTACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGa > 2:1348701/1‑150 (MQ=255) aCGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGa < 2:1426927/150‑1 (MQ=255) aCGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGa > 1:242334/1‑150 (MQ=255) | AGACCGAGTCACTGGTGGAAATGGTCGACCTGGCCAAGCGCAACAGCGTCTATTGAGCGCTCGGCTGCCATGAAACAGTTGCTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGC‑AGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGA > NC_002947/3861053‑3861348 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |