| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,050,055 | T→G | 6.2% | L15R (CTG→CGG) ‡ | oprB‑III → | carbohydrate‑selective porin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,050,055 | 0 | T | G | 6.2% | 271.6 / 9.0 | 97 | L15R (CTG→CGG) ‡ | oprB‑III | carbohydrate‑selective porin |
| Reads supporting (aligned to +/- strand): ref base T (57/34); new base G (4/2); total (61/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.36e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
CCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAACGCCCACGGTG > NC_002947/4049906‑4050204 | ccGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGctggccct < 2:617751/150‑1 (MQ=255) cGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGctggccctg < 2:568577/150‑1 (MQ=255) tAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGctggccctggc > 1:1531732/1‑150 (MQ=255) tGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCt > 2:726444/1‑150 (MQ=255) ggCAAGCCCGCTCCTACCAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGcga < 1:515842/150‑1 (MQ=255) cccGCTCCTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAtct > 2:363952/1‑150 (MQ=255) cccGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAtct > 2:2104287/1‑150 (MQ=255) ccGCTCCTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAtctc > 1:1624576/1‑150 (MQ=255) ccGCTCCTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACACTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAtcag > 1:2006856/1‑148 (MQ=38) cGCTCCTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGc < 1:2008803/130‑1 (MQ=255) cGCTCCTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGc > 2:2008803/1‑130 (MQ=255) gCTCCTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCAt > 1:178128/1‑150 (MQ=255) gCTCCTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCACCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCAt > 1:278448/1‑150 (MQ=255) gCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGCCGATCTCAt > 1:719753/1‑150 (MQ=255) gCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCAt > 1:418390/1‑150 (MQ=255) gCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCAGGGCCAGcagcagg > 2:752547/1‑122 (MQ=255) gCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCAGGGCCAGcagcagg < 1:752547/127‑6 (MQ=255) tCCTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGcga < 2:2292681/139‑1 (MQ=255) tCCTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGcga > 1:2292681/1‑139 (MQ=255) tCCTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGa > 2:2287637/1‑150 (MQ=255) ttACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCTTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGAcc < 1:992203/149‑1 (MQ=255) cAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCgc < 2:446478/150‑1 (MQ=255) ggCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCgcagc > 2:2062634/1‑150 (MQ=255) gCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCgcagca > 2:1106580/1‑150 (MQ=255) ccccTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTg < 1:900317/116‑1 (MQ=255) ccccTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTg > 2:900317/1‑116 (MQ=255) cccTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCAcc > 2:1189623/1‑150 (MQ=255) cccTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCAcc > 1:1753173/1‑150 (MQ=255) cccTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCAcc < 1:1189623/150‑1 (MQ=255) cTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCt > 2:197922/1‑150 (MQ=255) tAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGAc < 2:1409396/150‑1 (MQ=255) ggCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACt < 1:2104287/150‑1 (MQ=255) gCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTg > 2:1542662/1‑150 (MQ=255) gCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTg < 1:2062634/150‑1 (MQ=255) cccGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGggcg < 2:178128/150‑1 (MQ=255) cccGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGggcg > 2:1268731/1‑150 (MQ=255) ccGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCTTGACCCGCAGCACCCTGACCGGTGACTGGggcgg > 2:1942809/1‑150 (MQ=255) ccGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGggcgg > 1:844060/1‑150 (MQ=255) ccGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGggcgg > 2:1472225/1‑150 (MQ=255) ccGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGggcgg > 2:2275461/1‑150 (MQ=255) ccGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGggcgg > 2:83426/1‑150 (MQ=255) gcgAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGTCGTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGcc > 1:614166/1‑150 (MQ=255) gcgAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGggc < 1:1614726/146‑1 (MQ=255) gcgAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGggc > 2:1614726/1‑146 (MQ=255) aaTGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCACAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCgca < 2:1997663/120‑1 (MQ=255) aaTGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCACAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCgca > 1:1997663/1‑120 (MQ=255) cccTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCAt > 2:95304/1‑150 (MQ=255) ccTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGcga < 2:2277253/97‑1 (MQ=255) ccTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGcga > 1:2277253/1‑97 (MQ=255) tCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCaa > 1:762100/1‑150 (MQ=255) aGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCg > 1:255201/1‑150 (MQ=255) gACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTTACTGGGGCGGCCTGCGCCATCAACTCga > 1:802134/1‑150 (MQ=255) aaCCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAt < 2:365801/91‑1 (MQ=255) aaCCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAt > 1:365801/1‑91 (MQ=255) aaCCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCgaaga > 1:1836699/1‑150 (MQ=255) aCCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGca < 1:1364408/67‑1 (MQ=255) aCCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGca > 2:1364408/1‑67 (MQ=255) ccGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGa > 2:823508/1‑95 (MQ=255) ccGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGa < 1:823508/95‑1 (MQ=255) ccGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAagaaga > 1:923372/1‑150 (MQ=255) ccGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAagaaga > 2:1333234/1‑150 (MQ=255) gagaTTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACg < 1:1542662/150‑1 (MQ=255) gaTTCTGTAATGCCATCCGCAATTCGCATCCCCCCCACCCTGCTGCGGTCCTTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGc < 2:844060/150‑1 (MQ=255) cTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCa > 2:1887925/1‑150 (MQ=255) tGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCaa < 1:2287637/150‑1 (MQ=255) tGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGACAGCGACGATCTCATGACCCGCAGCACCCTGa > 1:1393424/1‑101 (MQ=255) tGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGACAGCGACGATCTCATGACCCGCAGCACCCTGa < 2:1393424/101‑1 (MQ=255) gTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACGGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAg > 2:2063997/1‑150 (MQ=255) tAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGa < 1:315986/150‑1 (MQ=255) tGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCTTGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCa < 1:1942809/150‑1 (MQ=255) tGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTgg < 1:1321714/107‑1 (MQ=255) tGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTgg > 2:1321714/1‑107 (MQ=255) aTCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCgg > 2:527922/1‑150 (MQ=255) tCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGc < 1:726444/150‑1 (MQ=255) tCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGc < 2:2094502/150‑1 (MQ=255) aTTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTAc < 1:1472225/150‑1 (MQ=255) ttCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACa > 2:2142168/1‑150 (MQ=255) ttCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACa > 1:2246348/1‑150 (MQ=255) gCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCGCCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCg > 1:1330211/1‑150 (MQ=255) cATCACCCCCTCCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCgg < 2:2246348/150‑1 (MQ=255) aTCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGt > 2:1136317/1‑150 (MQ=255) ccccACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCtt < 1:1356359/40‑1 (MQ=255) ccccACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCtt > 2:1356359/1‑40 (MQ=255) cccACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAAcc > 1:117662/1‑150 (MQ=255) ccACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCg > 2:914031/1‑141 (MQ=255) ccACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCg < 1:914031/141‑1 (MQ=255) ccACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCg > 2:2296720/1‑150 (MQ=255) cACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGc < 2:117662/150‑1 (MQ=255) agtggtgctgGCCAGGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTa > 1:190791/6‑150 (MQ=255) tgctgGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAACG > 2:485646‑M1/1‑150 (MQ=255) tgctgGCCAGGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCg < 1:1480360/132‑1 (MQ=255) tgctgGCCAGGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCg > 2:1480360/1‑132 (MQ=255) gctgGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGACCCCTGAGATGCGGTTTTGGCTGCCTATTCCATCAACCCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAACGc < 1:1333234/150‑1 (MQ=255) gctgGCCAGGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAACGC > 1:843144‑M1/1‑150 (MQ=255) tggccctggccAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAagaaga < 1:114112/100‑1 (MQ=255) tggccctggccAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAagaaga > 2:114112/1‑100 (MQ=255) cctggccAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGggcggc > 1:1368007/1‑73 (MQ=255) cctggccAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGggcggc < 2:1368007/73‑1 (MQ=255) cctggccAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAACGCCCACgg > 1:1395596/1‑150 (MQ=255) tggccTGCACCACTGCTCTTGCCAGCGATGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAGGTCGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAACGCCCACGGTg < 2:802134/150‑1 (MQ=255) | CCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAACGCCCACGGTG > NC_002947/4049906‑4050204 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |