| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,128,148 | A→T | 6.1% | Q158L (CAG→CTG) | htrG → | signal transduction protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,128,148 | 0 | A | T | 6.1% | 241.1 / 4.3 | 78 | Q158L (CAG→CTG) | htrG | signal transduction protein |
| Reads supporting (aligned to +/- strand): ref base A (40/33); new base T (3/2); total (43/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
GCTCGATGCCCAGGTCACCGAACTGACCGGGCAGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAGGCTTGCTGGCGGGGCTGATCCTGCCGGCACTGACCCG > NC_002947/4127999‑4128295 | gCTCGATGCCCAGGTCACCGAACTGACCGGGCAGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGagca < 2:518569/150‑1 (MQ=255) ccAGGTCACCGAACTGACCGGGCAGTTGAAGACCATGGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCa > 1:1935014/1‑150 (MQ=255) ccAGGTCACCGAACTGACCGGGCAGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCa > 2:1632132/1‑150 (MQ=255) ccAGGTCACCGAACTGACCGGGCAGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCAAGCAGGAAACGCTGGATTCGCGGAAGCAGCTGATTGATGAGTTGGAGGCACGCGACAAGGCTCTGATGGAGCTGCTTGGTCa > 2:963180/1‑150 (MQ=255) ccAGGTCACAGAACTGACCGGGCAGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCa > 2:31881/1‑150 (MQ=255) aGGTCACCGAACTGACCGGGCAGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCaga < 1:1603277/150‑1 (MQ=255) gTCACCGAACTGACCGGGCAGTTGAAGACCATCGACGACAGCGGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGAAGCAAAGAGAGTATTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGc > 2:1817109/1‑150 (MQ=255) aCCGAACTGACCGGGCAGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCa > 2:1140820/1‑149 (MQ=255) aCCGAACTGACCGGGCAGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCa < 1:1140820/149‑1 (MQ=255) ccGAACTGACCGGGCAGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCTCTGATCGAGCTGCTCGTTCAGTGccttg < 1:963180/150‑4 (MQ=255) gaCTGACCGGGCAGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCa > 2:2181958/2‑139 (MQ=255) gaCTGACCGGGCAGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCa < 1:2181958/138‑1 (MQ=255) gACCGGGCAGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCt > 2:1102528/1‑150 (MQ=255) cGGGCAGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTgcg > 1:2059372/1‑150 (MQ=255) gggCAGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACACAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTgcgc > 1:739847/1‑150 (MQ=255) ggCAGTTGAAGACCATCGACGACAGCTGGAAGAAACTCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGcgcg > 1:2300357/1‑150 (MQ=255) aGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCaga < 2:1321456/129‑1 (MQ=255) aGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCAATCAGAGCCAGTCGGACCTGCGCGATa < 1:1817109/150‑1 (MQ=255) aGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGATCATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCaga > 1:1321456/1‑129 (MQ=255) gAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCg < 2:827795/133‑1 (MQ=255) gAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCg > 1:827795/1‑133 (MQ=255) aCCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAg < 1:2002302/126‑1 (MQ=255) aCCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAg > 2:2002302/1‑126 (MQ=255) ccATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGccc < 2:1519168/150‑1 (MQ=255) tCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCTGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCGCGcc > 1:2004724/1‑150 (MQ=255) cgacAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTggg < 1:31881/150‑1 (MQ=255) gacAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACACAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTgggg < 2:739847/150‑1 (MQ=255) gCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGAGGATg < 2:276512/150‑1 (MQ=255) cTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATga < 1:469779/150‑1 (MQ=255) ggAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATgaga > 1:261696/1‑150 (MQ=255) gaagaaCCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCTCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGaa < 2:2300357/150‑1 (MQ=255) aCCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGc < 2:261696/150‑1 (MQ=255) ccGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAg > 2:1938493/1‑124 (MQ=255) ccGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAg < 1:1938493/124‑1 (MQ=255) ccGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGAt < 2:901766/139‑1 (MQ=255) ccGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGAt > 1:901766/1‑139 (MQ=255) gggCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATga < 2:1531560/132‑1 (MQ=255) gggCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATga > 1:1531560/1‑132 (MQ=255) aTGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATgcgc > 2:1000984/1‑150 (MQ=255) aTGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATgcgc > 1:298550/1‑150 (MQ=255) aTGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATgcgc > 1:365507/1‑150 (MQ=255) tGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGtga < 1:360326/141‑1 (MQ=255) tGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGtga > 2:360326/1‑141 (MQ=255) aGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGt > 2:2218072/1‑87 (MQ=255) aGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGt < 1:2218072/87‑1 (MQ=255) cTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTAt > 1:1824863/1‑150 (MQ=255) aTTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATggcg > 1:475923/1‑150 (MQ=255) cgcgCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGgca < 1:1632132/150‑1 (MQ=255) gcgcAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCAATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGgcag > 2:664050/1‑150 (MQ=255) cgcAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGgcagc > 2:1995370/1‑150 (MQ=255) gcagcTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGc > 2:1946491/1‑150 (MQ=255) cTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGt < 1:1816265/150‑1 (MQ=255) cTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGt > 1:1384017/1‑150 (MQ=255) gattgatGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGc > 2:591753/1‑150 (MQ=255) attgatGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCa > 2:1582885/1‑150 (MQ=255) ttgatGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAg < 2:1824863/150‑1 (MQ=255) tGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAGGCTTGCTgg < 2:365507/150‑1 (MQ=255) aCGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAGGc > 2:326447/1‑136 (MQ=255) aCGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAGGc < 1:326447/136‑1 (MQ=255) gCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAGGCTTGCTGGCGGGGCTGa > 2:820297/1‑150 (MQ=255) gCAACAAGGCACTGAACGAGCAGCTCGATCAAAGCCAGTCTGATCTGCGCGATACCCAGGCCCGCCTGGGGGAGGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGTCGGTGCAGGCTTGCTGGCGGGGCTGa < 1:1102528/150‑1 (MQ=255) caacaaGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGtga < 2:176288/89‑1 (MQ=255) caacaaGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGtga > 1:176288/1‑89 (MQ=255) aacaaGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGc < 2:1372668/82‑1 (MQ=255) aacaaGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGc > 1:1372668/1‑82 (MQ=255) caaGGCACTGAACGAGCAGCTCGATCCGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAGGCTTGCTGGCGGGGCTGATCCt < 1:591753/150‑1 (MQ=255) aGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGGATGGCGGCAGCATTGCCGGTGCAGGCTTGCTGGCGGGGCTGATCCTGc > 1:1077685/1‑150 (MQ=255) aCTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGgtg > 1:1671598/1‑97 (MQ=255) aCTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGgtg < 2:1671598/97‑1 (MQ=255) tGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATggcggc > 1:1752913/1‑104 (MQ=255) tGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATggcggc < 2:1752913/104‑1 (MQ=255) tGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAGGCTTGCTGGCGGGGCTGATCCTGCCgg > 2:308686/1‑147 (MQ=255) tGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAGGCTTGCTGGCGGGGCTGATCCTGCCgg < 1:308686/147‑1 (MQ=255) gatcGAGCTGCTCGTTCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAGGCTTGCTGGCgg < 2:1289521/128‑1 (MQ=255) gatcGAGCTGCTCGTTCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAGGCTTGCTGGCgg > 1:1289521/4‑131 (MQ=255) gAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAGGCTTGCTGGCGGGGCTGATCCTGCCGGCACt < 1:1582885/150‑1 (MQ=255) aaCGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCAGTTGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAGGCTTGCTGGCGGGGCTGATCCTGCCGGCACTg > 1:1919978/1‑150 (MQ=255) gAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGc > 2:1343083/1‑107 (MQ=255) gAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGc < 1:1343083/107‑1 (MQ=255) gcagcTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAGGCTTGCTGGCGGGGCTGATCCTGCCGGCACTGACCCg > 1:2311501/1‑150 (MQ=255) gcagcTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAGGCTTGCTGGCGGGGCTGATCCTGCCGGCACTGACCCg < 1:1946491/150‑1 (MQ=255) | GCTCGATGCCCAGGTCACCGAACTGACCGGGCAGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGATCAGAGCCAGTCGGACCTGCGCGATACCCAGGCCCGCCTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAGGCTTGCTGGCGGGGCTGATCCTGCCGGCACTGACCCG > NC_002947/4127999‑4128295 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |