| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,165,672 | A→G | 5.0% | P158P (CCT→CCC) | PP_3666 ← | MHS family metabolite MFS transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,165,672 | 0 | A | G | 5.0% | 361.9 / 5.6 | 120 | P158P (CCT→CCC) | PP_3666 | MHS family metabolite MFS transporter |
| Reads supporting (aligned to +/- strand): ref base A (55/58); new base G (4/2); total (60/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.45e-01 | |||||||||||
Only 100 of 121 total aligned reads displayed.
CGCCAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGATGCAGAAGGTGGA > NC_002947/4165525‑4165821 | agcagGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAggcggc > 2:1308708/1‑150 (MQ=255) cagGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGgcgc < 2:1458192/150‑1 (MQ=255) gAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTa > 2:1923334/1‑150 (MQ=255) aCGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACt < 2:1783664/150‑1 (MQ=255) cAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGCACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGc > 2:318989/1‑150 (MQ=255) cAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCATCAACGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGc < 1:1897267/150‑1 (MQ=255) ggCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCa < 2:894770/150‑1 (MQ=255) ccccACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCTGGgcggcgt > 2:357110/1‑130 (MQ=255) ccccACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCa > 1:1146089/1‑150 (MQ=255) cccACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAg > 2:805215/1‑150 (MQ=255) cctcTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCCCCGCGTCAATCTCTTCAGCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCAGGTTCTCAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGc > 1:1228530/4‑150 (MQ=255) ccACTCATGCAGGGCTTCACTGCTGAGCCGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCACGCGGCGCGTCCTCGGCCAGGAACGCAGc < 1:1717212/150‑1 (MQ=255) aCTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAAAGCCGCAACGAACAACAACCCCAGGACGGGTCGGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCgg > 1:870616/1‑150 (MQ=255) aTGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGcccc > 2:558896/1‑150 (MQ=255) tGCAGGGCTTCACTGCTGAGGAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCg < 2:763518/150‑1 (MQ=255) cAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGc < 2:2101060/150‑1 (MQ=255) aGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCg < 1:363378/150‑1 (MQ=255) aGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCg > 2:360990/1‑150 (MQ=255) ggCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTa > 2:838027/1‑150 (MQ=255) gCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGTCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTAc > 1:2062399/1‑150 (MQ=255) ttCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTc > 2:1485855/1‑150 (MQ=255) ttCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAACCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTc > 2:733624/1‑150 (MQ=255) aCTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCAcc > 2:1295404/1‑150 (MQ=255) tgctgAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAg < 1:751599/129‑1 (MQ=255) tgctgAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAg > 2:751599/1‑129 (MQ=255) ctgAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAg < 1:1349139/150‑1 (MQ=255) gAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGc < 1:1541108/150‑1 (MQ=255) gaagcTCCTGCAGCACCGCGACGAACGCCGCACCTAACATCAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCgg < 2:551871/148‑1 (MQ=255) cagcTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACCCACCCGAGGCGGa > 2:547323/1‑150 (MQ=255) aTGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTa < 2:1756411/99‑1 (MQ=255) aTGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAAccc < 1:1308708/150‑1 (MQ=255) gcagcaCCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGa > 2:1391877/1‑136 (MQ=255) gcagcaCCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGa < 1:1391877/136‑1 (MQ=255) gcagcaCCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCt < 1:107909/150‑1 (MQ=255) agcaCCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAg > 1:2002335/1‑112 (MQ=255) agcaCCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAg < 2:2002335/112‑1 (MQ=255) gcaCCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTa > 1:118417/1‑150 (MQ=255) gcaCCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTa > 1:462380/1‑150 (MQ=255) caCCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTa > 1:2188073/1‑123 (MQ=255) caCCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTa < 2:2188073/123‑1 (MQ=255) ccGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCAAGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAACAGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCGGTaaga > 2:19892/1‑147 (MQ=255) gcgACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAgg < 2:521624/150‑1 (MQ=255) cgacgaACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGc < 1:495311/150‑1 (MQ=255) gacgaACGCCGCCCCGAAAAACAAACCCGCCGCCGAGCTGGCCGGCACGGTGCTGGTGTCCAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCg < 2:1288972/150‑1 (MQ=255) ccgaACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCGCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCgg > 2:1600975/2‑150 (MQ=255) acgaACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCTGGgcggcgtggc < 2:1684703/86‑5 (MQ=255) acgaACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCTGGgcggcgtggc > 1:1684703/1‑82 (MQ=255) gaACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGAt < 2:118417/150‑1 (MQ=255) aaCGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATc < 1:360990/150‑1 (MQ=255) aCGCCGCACCGAACACCAACCGCGCCGCAGTGCTGGCCGGCCCGATGCTGGTATACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGACGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATca < 2:1673900/150‑1 (MQ=255) gccgcACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCCCGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCTGCCCCGGCGTACTCACCCGAGGCGTAAGACGCCTGTACCAGGCGGATcagc > 2:2241082/1‑150 (MQ=255) gccgcACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAAccc < 2:1987956/131‑1 (MQ=255) gccgcACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAAccc > 1:1987956/1‑131 (MQ=255) gccgcACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATcagc < 2:567927/150‑1 (MQ=255) cgcACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATcagcaa < 1:318989/150‑1 (MQ=255) gcACCGAACAACAACCCCGCCGCCGGGCTGGCCGGCACGATGCGGGAGTACAAGCCCGGCCGCCCCGGCGGCGCGTACTCGGCCAGGAACGCAGCCGGCCCGGCGGACGCACCCGAGGCGGAAAACCCCTGTACCAGGCGGCTcagcaac > 1:1935818/1‑150 (MQ=255) cACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTa > 1:70340/1‑132 (MQ=255) cACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTa < 2:70340/132‑1 (MQ=255) cACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATcagcaaca < 2:217123/150‑1 (MQ=255) cGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAgg > 1:1481453/1‑114 (MQ=255) cGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAgg < 2:1481453/114‑1 (MQ=255) gAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATcagcaacagcaa > 2:27329/1‑150 (MQ=255) aacaacaacCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAg > 1:2098165/1‑150 (MQ=255) aacaacCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGcc < 1:1743446/150‑1 (MQ=255) ccccGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGc < 1:1923334/150‑1 (MQ=255) ccgccgccgTCCTGGCCGGCACGATGCTGGTGTACGGGCCGCGCCGCCCAGGCGGCGGGTGCGCGGCCAGGAACGCAGCGGCCCTGGCGTACTCACCCGAGGCGGACAACCCCGGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGccc < 2:1935818/150‑1 (MQ=255) cTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATc > 1:2077934/1‑150 (MQ=255) gCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTgc > 1:857308/1‑150 (MQ=255) cGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACCCGCCGGTGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTgcgc < 1:733624/150‑1 (MQ=255) tGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGGCCACAGCCCGATCTGCGCATAGCCCg > 1:2114327/1‑150 (MQ=255) tGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCg < 2:857308/150‑1 (MQ=255) gCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCca > 1:202430/1‑126 (MQ=255) gCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCca < 2:202430/126‑1 (MQ=255) gCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCgg < 1:1600975/150‑1 (MQ=255) gCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCgg > 2:1113235/1‑150 (MQ=255) tGGTGTACAATCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAACCCGGca > 2:2262610/1‑150 (MQ=255) tGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTa < 1:796774/90‑1 (MQ=255) tGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTa > 2:796774/1‑90 (MQ=255) gtgtACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGcaac < 1:1295404/150‑1 (MQ=255) gtgtACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGcaac > 1:267690/1‑150 (MQ=255) tACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAg > 1:1339824/1‑150 (MQ=255) gtacgcgccgcCTGGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGa > 2:2283535/6‑150 (MQ=255) aGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCGGGCAACAAGCCGa > 1:949248/1‑150 (MQ=255) gCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGAt < 2:1634538/150‑1 (MQ=255) gCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGAt > 2:1932009/1‑150 (MQ=255) gCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGAt > 2:1701712/1‑150 (MQ=255) gCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGAAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCCACAAGCCGAt < 2:1843085/150‑1 (MQ=255) ccACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGATg > 1:1682885/1‑150 (MQ=255) ccACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGATg < 1:1422940/150‑1 (MQ=255) cACGCTGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGATGc > 2:2330325/1‑150 (MQ=255) aCGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCATCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGATGCa < 1:838027/150‑1 (MQ=255) aCGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAACCGATGCa > 2:1319697/1‑150 (MQ=255) cgccCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGATGCAGAAg < 1:1485855/150‑1 (MQ=255) cccAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTgc < 1:267795/118‑1 (MQ=255) cccAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTgc > 2:267795/1‑118 (MQ=255) cccAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGc < 1:1489871/137‑1 (MQ=255) cccAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGc > 2:1489871/1‑137 (MQ=255) cAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGATGCAGAAGGTgg > 1:469011/1‑150 (MQ=255) cAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGACAACAGCGAGATGTGCGCAGAAGGCGGCAACAATCCGATGCAGAAGGTgg > 2:1776432/1‑150 (MQ=255) aGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGATGCAGAAGGTGGa > 1:1644470/1‑150 (MQ=255) | CGCCAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGATGCAGAAGGTGGA > NC_002947/4165525‑4165821 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |