| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,267,990 | A→T | 5.7% | intergenic (‑89/+14) | galP‑IV ← / ← PP_3740 | porin‑like protein/MFS transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,267,990 | 0 | A | T | 5.7% | 307.0 / 7.0 | 100 | intergenic (‑89/+14) | galP‑IV/PP_3740 | porin‑like protein/MFS transporter |
| Reads supporting (aligned to +/- strand): ref base A (52/42); new base T (3/3); total (55/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCCAAACGCCAGCGAAACAGCCAGGACCGAACGGGCCAGCGTGCAAGTTGTGTCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGCCATACAGATGCAGGGGTTGCCAGCCACCAT > NC_002947/4267842‑4268137 | gCCAAACGCCAGCGAAACAGCCAGGACCGAACGGGCCAGCGTGCAAGTTGTGTCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCATCATTATCTTTAGCTGTATGTTGCATTCAGATACCCGGCCAg > 2:382507/1‑150 (MQ=255) aaaCGCCAGCGAAACAGCCAGGACCGAACGGGCCAGCGTGCAAGTTGTGTCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGcc > 2:1925110/1‑150 (MQ=255) cAGCGAAACAGCCAGGACCGAACGGGCCAGCGTGCAAGTTGTGTCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTa > 1:815414/1‑150 (MQ=255) gCGAAACAGCCAGGACCGAACGGGCCAGCGTGCAAGTTGTGTCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTaca > 1:1998721/1‑150 (MQ=255) gCGAAACAGCCAGGACCGAACGGGCCAGCGTGCAAGTTGTGTCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTa < 1:1292537/148‑1 (MQ=255) gCGAAACAGCCAGGACCGAACGGGCCAGCGTGCAAGTTGTGTCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTa > 2:1292537/1‑148 (MQ=255) aaaCAGCCAGGACCGAACGGGCCAGCGTGCAAGTTGTGTCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCTGGCCGGGtatctgaa < 2:1184982/150‑8 (MQ=255) cAGCCAGGACCGAACGGGCCAGCGTGCAAGTTGTGTCCATCATTATTATTGTTCTCCACGTTCGATAGGCGCAGCAGACCGCCCCAGGCCAGCCTGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGt < 2:1510876/150‑1 (MQ=255) ccAGGACCGAACGGGCCAGCGTGCAAGTTGTGTCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGc > 2:1739928/1‑150 (MQ=255) ggACCGAACGGGCCAGCGTGCAAGTTGTGTCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCa < 1:1341267/150‑1 (MQ=255) aCCGAAAGGGCCAGCGTGCAAGTTGTGTCCATTATTATTTTTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGt < 2:505147/150‑1 (MQ=255) aaCGGGCCAGCGTGCAAGTTGTGTCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGc > 2:1966395/1‑123 (MQ=255) aaCGGGCCAGCGTGCAAGTTGTGTCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGc < 1:1966395/123‑1 (MQ=255) ggCCAGCGTGCAAGTTGTGTCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATcagc < 1:608478/150‑1 (MQ=255) tccAGCGTGCAAGTTGTGTCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATcagca < 2:1170556/149‑1 (MQ=255) ccAGCGTGCAAGTTGTGTCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATcagcag < 1:739969/150‑1 (MQ=255) aGCATGCAAGTTGTGTCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCaggc > 1:388591/1‑150 (MQ=255) gCGTGCAAGTTGTGTCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAgg < 1:1477121/113‑1 (MQ=255) gCGTGCAAGTTGTGTCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAgg > 2:1477121/1‑113 (MQ=255) cGTGCAAGTTGTGTCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCaggcaa > 2:366769/1‑150 (MQ=255) gTGCAAGTTGTGTCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCaggcaag < 2:1998721/150‑1 (MQ=255) gCAAGTTGTGTCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCaggcaaggc > 1:1146724/1‑150 (MQ=255) ttGTGTCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACg > 1:1305711/1‑150 (MQ=255) tgtCCATCGTTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAg > 2:358782/1‑150 (MQ=255) tCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGa < 2:1549563/143‑1 (MQ=255) tCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGa > 1:1549563/1‑143 (MQ=255) tCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGAACGCCCCAGACCAGCATGGCCCAGAGCAGGAAGTTGCATTCAGATACCAGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATAAGCAGGCAAGGAAGAAGCCGGc > 2:908243/1‑150 (MQ=255) attattattGTTCTCCAGGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGCTAACCGGCCAGCACGGATTCGACCCCTAGGTTGTATGCAGCAGCAGGCATGGCAGAGGCCGGCTTGGca > 2:1193858/1‑149 (MQ=255) ttattGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGt > 1:1423631/1‑105 (MQ=255) ttattGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGt < 2:1423631/105‑1 (MQ=255) ttattGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTg < 2:388591/150‑1 (MQ=255) attGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTggg > 2:2001012/1‑150 (MQ=255) tGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGgcg > 2:742759/1‑150 (MQ=255) ttCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCaggcaag < 1:945587/122‑1 (MQ=255) ttCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCaggcaag > 2:945587/1‑122 (MQ=255) ttCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCa > 2:545159/1‑150 (MQ=255) ctcCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGACTCACTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAAc < 2:914633/150‑1 (MQ=255) ccACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGc < 1:609458/135‑1 (MQ=255) ccACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGc > 2:609458/1‑135 (MQ=255) ccACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAAcag > 1:549629/1‑150 (MQ=255) aCGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAAcagca > 2:637513/1‑150 (MQ=255) gcgcAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCt > 2:181836/1‑150 (MQ=255) agcagACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCACCCTGCgg > 2:962751/1‑150 (MQ=255) cGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCAc > 1:1968339/1‑150 (MQ=255) cGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCAc > 1:1597914/1‑150 (MQ=255) cGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCCGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCAc < 2:1566660/150‑1 (MQ=255) gCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAg < 2:1540610/103‑1 (MQ=255) gCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAg > 1:1540610/1‑103 (MQ=255) gCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACg < 1:1739928/150‑1 (MQ=255) ccccAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGgc > 2:666432/1‑117 (MQ=255) ccccAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGgc < 1:666432/117‑1 (MQ=255) ccccAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGa > 2:749816/1‑150 (MQ=255) cccAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTAAGTGGATCATCGGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGaa > 1:1450687/1‑150 (MQ=255) ccAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCt > 2:475511/1‑150 (MQ=255) ccAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCt < 1:742759/150‑1 (MQ=255) cAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTg < 2:1305711/150‑1 (MQ=255) cAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTg > 1:924038/1‑150 (MQ=255) aGCATGACCCGTAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCACGCAAGGCAGACGCAGGCTTGGCCGTTGTGCGCAACAGAAGCAGGCAACCTGCGGCAAGCACGAACACGCTgg < 1:2171957/150‑1 (MQ=255) aGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTgt < 2:1597914/150‑2 (MQ=255) aGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTgg < 2:1146724/150‑1 (MQ=255) cATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCg > 1:424603/1‑150 (MQ=255) cccGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAacac > 1:1892499/1‑150 (MQ=255) ccGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCaaaa > 1:1874029/1‑104 (MQ=255) ccGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCaaaa < 2:1874029/106‑3 (MQ=255) cGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGc < 1:908243/150‑1 (MQ=255) ggAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGtt > 1:775567/1‑94 (MQ=255) ggAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGtt < 2:775567/94‑1 (MQ=255) ggAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGcc < 2:549629/150‑1 (MQ=255) gAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCCGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGCCa > 2:638752/1‑150 (MQ=255) gAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGCCa < 1:382507/150‑1 (MQ=255) gTAAGTTGCATTCAGATACCCGGCTAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTGGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGCCATACAg > 1:1355148/1‑150 (MQ=255) ttGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGCCATACAGATGCa < 1:749816/150‑1 (MQ=255) ttGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGACAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTg > 2:507819/1‑128 (MQ=255) ttGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGACAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTg < 1:507819/128‑1 (MQ=255) tGCATTCAGATGCCCGGCCAGGCCGGGTTACTGTCGGTCGCTCAGTGCAGCAGCAGTCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGCCATACAGATGCAg < 2:1355148/150‑1 (MQ=255) tGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGCCATACAGATGCAg < 2:1968339/150‑1 (MQ=255) cATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGCCATACAGATGCAggg < 2:1652708/150‑1 (MQ=255) aTTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAAcagc > 2:2197245/1‑91 (MQ=255) aTTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAAcagc < 1:2197245/91‑1 (MQ=255) ttCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGCCATACAGATGCAGGGGt > 1:480819/1‑150 (MQ=255) tgtaaCCCGGCCTGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGCCa > 2:1194712/5‑132 (MQ=255) tgtaaCCCGGCCTGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGCCa < 1:1194712/128‑1 (MQ=255) taaCCCGGCCTGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGCCATACAGATGCAGGGGTTgcca > 2:1099335/3‑150 (MQ=255) aCCCGGCCTGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAg < 2:1762391/103‑1 (MQ=255) aCCCGGCCTGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAg > 1:1762391/1‑103 (MQ=255) aCCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTg < 1:119021/116‑1 (MQ=255) aCCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTg > 2:119490/1‑116 (MQ=255) aCCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTg > 2:119021/1‑116 (MQ=255) aCCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTg < 1:119490/116‑1 (MQ=255) aCCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGCCATACAGATGCAGGGGTTgccagc < 2:815414/150‑1 (MQ=255) ccGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGCCATACAGATGCAggg < 2:59415/139‑1 (MQ=255) ccGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGCCATACAGATGCAggg > 1:59415/1‑139 (MQ=255) ccGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGCCATACAGATGCAGGGGTTgccagcca > 2:2201206/1‑150 (MQ=255) ccGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGCCATACAGATGCAGGGGTTgccagcca > 2:1179636/1‑150 (MQ=255) ccGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGCCATACAGATGCAGGGGTTgccagcca > 1:2296787/1‑150 (MQ=255) ccGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGCCATACAGATGCAGGGGTTgccagcca > 1:2292344/1‑150 (MQ=255) ccGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTCAGCCAACCATTGTCACGCTGGCGAACACGCCATACAGATGCAGGGGTTgccagcca < 1:358782/150‑1 (MQ=255) cGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGCCATACAGATGCAGGGGTTGCCAGccac > 1:2027868/1‑150 (MQ=255) ggCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGCCATACAGATGCAGGGGTTGCCAGccacc > 1:2130597/1‑150 (MQ=255) ccAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGCCATACAGATGCAGGGGTTGCCAGCCACCAt < 1:1925110/150‑1 (MQ=255) | GCCAAACGCCAGCGAAACAGCCAGGACCGAACGGGCCAGCGTGCAAGTTGTGTCCATCATTATTATTGTTCTCCACGTTCAATAGGCGCAGCAGACCGCCCCAGGCCAGCATGACCCGGAGCAGTAAGTTGCATTCAGATACCCGGCCAGGCCGGGTTACACTCAGTGGCTCAGTGCATCAGCAGGCAAGGCAGACGCAGGCTTGGCCGTTGGGCGCAACAGCAGCAGGCAACCTGCGGCAAGCACGAACACGCTGGCGAACACGCCATACAGATGCAGGGGTTGCCAGCCACCAT > NC_002947/4267842‑4268137 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |