| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,415,076 | T→C | 6.9% | intergenic (+141/+27) | PP_5644 → / ← PP_3899 | membrane protein/hicB family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,415,076 | 0 | T | C | 6.9% | 302.6 / 8.3 | 101 | intergenic (+141/+27) | PP_5644/PP_3899 | membrane protein/hicB family protein |
| Reads supporting (aligned to +/- strand): ref base T (47/47); new base C (3/4); total (50/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.19e-01 | |||||||||||
Only 100 of 103 total aligned reads displayed.
AGGAGTAGATGGCTATGAAGCACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCTACCCTCACATTGAA > NC_002947/4414928‑4415225 | aGGAGTAGATGGCTATGAAGCACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCAtt < 1:2083559/150‑1 (MQ=255) cTATGAAGCACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCACTGCAATGCGGGCt < 1:301240/150‑1 (MQ=255) tATGAAGCACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCtt < 1:1841324/150‑1 (MQ=255) gAAGCACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTc > 1:2166940/1‑150 (MQ=255) gCACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCttt > 2:859381/1‑150 (MQ=255) gCACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCCAATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCttt < 1:2288995/150‑1 (MQ=255) gCACTCCTCTTGAAGCCGCCAGCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACATTGAAGGCTCATACGCTTCCCTAAGTTAGCACGTATTGAAGTGGGGGCTTTTGttt > 2:849100/1‑150 (MQ=255) cACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTg < 1:1142922/136‑1 (MQ=255) cACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTg > 2:1142922/1‑136 (MQ=255) cACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTg < 2:2166940/150‑1 (MQ=255) tcctcTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGggc < 2:221350/150‑1 (MQ=255) tcctcTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCACTGCAATGCGGGCta < 1:2223951/140‑2 (MQ=255) tcctcTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCACTGCAATGCGGGCta > 2:2223951/1‑139 (MQ=255) ctctTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGggcgg > 2:1379855/1‑150 (MQ=255) ttGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCTGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTg > 1:1714088/1‑142 (MQ=255) ttGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCTGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTg < 2:1714088/142‑1 (MQ=255) ttGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCttt > 2:2148901/1‑141 (MQ=255) ttGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCttt < 1:2148901/141‑1 (MQ=255) aaGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑Acgc > 1:1215587/1‑150 (MQ=255) gccgccATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGt < 1:1368008/150‑1 (MQ=255) gccgccATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGt < 2:1963611/150‑1 (MQ=255) gccATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑Ac > 1:2065328/1‑143 (MQ=255) gccATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑Ac < 2:2065328/143‑1 (MQ=255) gccATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGtgat > 1:953153/1‑150 (MQ=255) cATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGtgatga < 2:1799193/150‑1 (MQ=255) tCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGggc < 2:2146655/133‑1 (MQ=255) tCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGggc > 1:2146655/1‑133 (MQ=255) aattcaTCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCa < 1:849100/145‑1 (MQ=255) aGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAg < 1:244174/150‑1 (MQ=255) aGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAg > 2:1320221/1‑150 (MQ=255) gATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCACTGCAATGCggg < 1:1771150/114‑1 (MQ=255) gATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCACTGCAATGCggg > 2:1771150/1‑114 (MQ=255) tCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑Ct < 2:1215587/150‑1 (MQ=255) cacaGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTg < 1:875630/119‑1 (MQ=255) cacaGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTg > 2:875630/1‑119 (MQ=255) cacaGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCAc > 2:2103939/1‑150 (MQ=255) cacaGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCAc < 2:953153/150‑1 (MQ=255) caGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTa > 2:1177158/1‑150 (MQ=255) tctgCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCAGGCGCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCCCTAAgc > 1:673414/4‑150 (MQ=255) tCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAgc > 1:530598/1‑150 (MQ=255) gCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCt > 1:1331155/1‑150 (MQ=255) ccTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCATACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCtt > 1:984983/1‑150 (MQ=255) ccTCGGCGGGATTCACCATGCATTCACGCTTTTTTCACGCCCTCTCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCtt < 2:69058/150‑1 (MQ=255) cTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTg > 1:1263676/1‑109 (MQ=255) cTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTg < 2:1263676/109‑1 (MQ=255) gggCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCgtgt < 1:765418/150‑1 (MQ=255) gCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCa < 1:1960679/150‑1 (MQ=255) ttCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGa > 1:696995/1‑150 (MQ=255) aCCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCa > 2:2109384/1‑150 (MQ=255) cATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTAACTAAGCGCTTTGCGTGTCAGATCAtt < 1:1379855/150‑1 (MQ=255) aTGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTaa < 1:1589073/127‑1 (MQ=255) aTGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTaa > 2:1589073/1‑127 (MQ=255) aTGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCttt > 2:2286764/1‑134 (MQ=255) cATTCACGCTTTTTTCACGCCCTCCCGTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTGAGATCATTCAAg > 2:1041009/1‑150 (MQ=255) cATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAg < 2:696995/150‑1 (MQ=255) aTTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAgg < 1:2169611/150‑1 (MQ=255) aCGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAgg > 1:485219/1‑109 (MQ=255) aCGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAgg < 2:485219/109‑1 (MQ=255) aCGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTACCTACGTTAGCCAGCATCGCAGTGCTGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGAGTGTTAGATCATTCAAGGAAAt > 2:1145696/1‑150 (MQ=255) cGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATa < 1:1177158/150‑1 (MQ=255) gCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATAc > 2:2143971/1‑150 (MQ=255) ttttttCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACtt > 2:2003587/1‑150 (MQ=255) ttttttCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACtt < 2:530598/150‑1 (MQ=255) cACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTtg > 2:38547/1‑150 (MQ=255) aCGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTtgg > 1:1426149/1‑150 (MQ=255) aCGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTtgg > 1:1067776/1‑150 (MQ=255) aCGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTtgg < 1:2109384/150‑1 (MQ=255) gCCATCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCACATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTTCGTGTCAGATCATTCAAGGAAATAATTTGATtgttt > 2:342014/1‑147 (MQ=255) ccTCCCCTGCACAGTGAAGGCTCATCAGCTTCCCCACGTTAGCCCGCATGGCATGGTGGGCTCTTCTTTAGGGGCCTCAGGTGGTATG‑CGTACTGA‑TGCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGCAATACTTTGCGTGGTGGc > 1:531669/1‑150 (MQ=255) tCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTg < 2:531669/150‑1 (MQ=255) ccccTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGc < 1:2103939/150‑1 (MQ=255) cacaGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCt < 1:2143971/150‑1 (MQ=255) caGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTgg < 1:2003587/150‑1 (MQ=255) aGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGc > 2:2103885/1‑150 (MQ=255) tGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCAtt < 2:1721067/112‑1 (MQ=255) tGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCAtt > 1:1721067/1‑112 (MQ=255) tGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCg > 2:1571691/1‑150 (MQ=255) tGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCg > 1:392470/1‑150 (MQ=255) gccTCATCCGATTCCCTACGTCAGCCCACATTGCAGTGCGGGCTTTTTTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAg < 1:342014/148‑1 (MQ=255) gCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAgg < 1:38547/150‑1 (MQ=255) gCTCATCCGCTTCCCTACGTTAGCCAGCATTGCAGTGCGGGCTTTTCTTTGGGCGACT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAAATCATACACGGAAATACTTTGCTTGGTGGCTGCCACGCGGGCCGCTacg > 2:372100/1‑148 (MQ=255) cTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGt < 1:2290083/150‑1 (MQ=255) tCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAg < 2:444782/72‑1 (MQ=255) tCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAg > 1:444782/1‑72 (MQ=255) cATCCTCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGc < 1:2121937/150‑1 (MQ=255) aTCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGa > 1:168258/1‑98 (MQ=255) aTCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑ATCACTAAGCGCTTTGCGTGTCAGATCATTCaa < 2:1267295/106‑1 (MQ=255) aTCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑ATCACTAAGCGCTTTGCGTGTCAGATCATTCaa > 1:1267295/1‑106 (MQ=255) aTCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCC‑GGTATCTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCAAGCTGGCTGCTAGGTGCa > 1:1916602/1‑150 (MQ=255) tCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAg > 1:700338/1‑150 (MQ=255) tCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAg < 1:2103885/150‑1 (MQ=255) tCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAg > 1:273506/1‑150 (MQ=255) ttCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGt < 1:1434773/150‑1 (MQ=255) tACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCa < 2:1705389/66‑1 (MQ=255) tACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCa > 1:1705389/1‑66 (MQ=255) aaGCCCGCACTGCAATGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCaa > 1:478332/2‑90 (MQ=255) aaGCCCGCACTGCAATGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCaa < 2:478332/89‑1 (MQ=255) gCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCTACCCTCACAtt < 2:392470/150‑1 (MQ=255) gCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCTACCCTCACAtt > 1:1338836/1‑150 (MQ=255) ttGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCTACCCTCACATTGaa < 1:859381/150‑1 (MQ=255) | AGGAGTAGATGGCTATGAAGCACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCT‑ACGCGTGATGACCCAGGTA‑CTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCTACCCTCACATTGAA > NC_002947/4414928‑4415225 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |