| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,584,198 | G→A | 5.5% | P477L (CCG→CTG) | glgE ← | alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,584,198 | 0 | G | A | 5.5% | 210.4 / 2.3 | 73 | P477L (CCG→CTG) | glgE | alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (33/35); new base A (2/2); total (35/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.89e-01 | |||||||||||
TACTCCTCCTTGCCCGGCAACGGCGTGCCCTCGCACAGCTCGAAGCCCGAATACATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCGCGCAGCTCCTGCTTGTGGTTGCGCCAGGTGAAATAGGTATAGCTCTGTGCGTAGCCGACCTTGCCCAGGCGCGCCATC > NC_002947/4584051‑4584347 | tgctcctcCTTGCCCGGCAACGGCTGGCCCGCGCACAGTTCGAAGCCCGAATACATGCCCCACAAGCCTGAGCCCATGTTCGCCAGCGCGGCACGGATCAGTAAACCTTCGCGGCCTTAGTTGTGCAG‑GAAAAACTGGTTTATGTCCTgt < 2:2232322/148‑1 (MQ=255)tACTCCTCCTTGCCCGGCAACGGCGTGCCCTCGCACAGCTCGAAGCCCGAATACATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGgt < 2:677481/150‑1 (MQ=255)tACTCCTCCTTGCCCGGCAACGGCGTGCCCTCGCACAGCTCGAAGCCCGAATACATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGgt < 1:1217079/150‑1 (MQ=255) aCTCCTCCTTACCCGGCAACGGCGTGCCCTCGCACAGCTCGAAGCCCGAAGACATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCAAGGAACAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGgtg > 1:2176174/1‑150 (MQ=255) tcctccTTGCCCGGCAACGGCGTGCCCTCGCACAGCTCGAAGCCCGAATACCTGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTa > 2:51279/1‑150 (MQ=255) tcctacTTGCCAGGAACAGGCGTGACCTCGCAAAGCTAGAAGCCAGAATACATGCCCCACAAGCCTGAGCCAATGGTCGCAAGCGCGGCACGGATAAGGAAAAATACGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTa > 2:2231072/1‑150 (MQ=255) ctcctTGCCCGGCAACGGCGTGCCCTCGCACAGCTCGAAGCCCGAATACATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTAtt > 1:2035346/1‑150 (MQ=255) ctcctTGCCCGGCAACGGCGTGCCCTCGCACAGCTCGAAGCCCGAATACATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTAtt > 2:622486/1‑150 (MQ=255) ttGCCCGGCAACGGCGTGCCCTCGCACAGCTCGAAGCCCGAATACATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACg > 2:2147898/1‑150 (MQ=255) gCCCGGCAACGGCGTGCCCTCGCACAGCTCGAAGCCCGAATACATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCAGTGTATTGACgaa > 1:883644/1‑150 (MQ=255) ccGGCAACGGCGTGCCCTCGCACAGCTCGAAGCCCGAATACATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACgaaga > 1:1025332/1‑150 (MQ=255) ccGGCAACGGCGTGCCCTCGCACAGCTCGAAGCCCGAATACATGCCACACAAGGCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGGGTGCAG‑GAAAAACGGGTTGATGGCCGGTGTCTTGAcgacga > 2:13530/1‑150 (MQ=255) ggCAACGGCGTGCCCTCGCACAGCTCGAAGCCCGAATACATGCACCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGaagaag < 2:51829/150‑1 (MQ=255) gCAACGGCGTGCCCTCGCACAGCTCGAAGCCCGAATACATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGt > 1:1142831/1‑150 (MQ=255) aCGGCGTGCCCTCGCACAGCTCGAAGCCCGCATACATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTgg > 1:1022160/1‑150 (MQ=255) gCGTGCCCTCGCACAGCTCGAAGCCCGAATACATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGcc > 1:710312/1‑150 (MQ=255) ccTCGCACAGCTCGAAGCCCGAATACATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGc > 1:78588/1‑150 (MQ=255) cGCACAGCTCGAAGCCCGAATACATGCCCCACAAGCCTGAGCCCATGGTCGCCACATGTGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACt < 1:1778882/150‑1 (MQ=255) aGCTCGAAGCCCGAATACATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTc < 2:2035346/150‑1 (MQ=255) gAAGCCCGAATACATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCAcgg > 1:533398/1‑150 (MQ=255) aGCCCGAATACATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGACGGTAGCACTGGCTCCAcggcg < 1:622486/150‑1 (MQ=255) gCCCGAATACATGCCCCACAAGAATGAGCGCATGGGCGCCATCGCGGCACGGATCAGTAAACCTGCGCGGCCTGAGGCG‑CCAGCCAGTAACCGGCGGATGTCCGGTGTATTGACGAAGAAGTTGGGCAGGTCGCACTGTCTCCAcggcgg > 1:1695480/1‑150 (MQ=255) ccGAATACATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTgg > 1:748583/1‑123 (MQ=255) ccGAATACATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTgg < 2:748583/123‑1 (MQ=255) ccGAATACATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCAcggcgg < 2:1613339/148‑1 (MQ=255) ccGAATACATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCAcggcgg > 1:1613339/1‑148 (MQ=255) gAATACATGCCCCAAAAGCCTGAGCCTATGGTCGCCAGCGCGGCACGGATCAGCAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGa < 1:2231072/150‑1 (MQ=255) aTACATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGAtt < 2:648550/150‑1 (MQ=255) cctGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAg < 2:626917/148‑1 (MQ=255) cATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAg < 2:395444/150‑1 (MQ=255) cATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAg < 2:1912400/150‑1 (MQ=255) gCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAgctg > 1:1456466/1‑150 (MQ=255) aaGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGaaa < 2:1025332/150‑1 (MQ=255) tGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTc < 2:2197367/150‑1 (MQ=255) aGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTcgc < 1:717902/150‑1 (MQ=255) aGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTcgc < 2:2170963/150‑1 (MQ=255) gCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTcgcg < 2:78588/150‑1 (MQ=255) gCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCAGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTcgag < 2:883644/150‑3 (MQ=255) cccATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCgcgc > 1:170441/1‑150 (MQ=255) ccATGGTCGCCAGCGCGGCACCGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCGGATTGAGCTGC‑TCGAAATA‑TTCGCGCa < 1:1473406/150‑1 (MQ=255) ggTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCGCGCAGCTc < 2:1142831/150‑1 (MQ=255) gTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCGCGCAGCTcc < 2:1695480/150‑1 (MQ=255) gTCGCCAGCGCGGCACGGATCAGGAAACCTCAGCGGCCTGAGGAGTGCAG‑GAAAAACGGGTTGATGTCGGTTGGATTGAAGAAGAAGCTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAAAA‑TTCGCGCAGCTcc > 1:1332899/1‑150 (MQ=255) cGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑GCG‑AATATTTCGAGCAGCTcaat < 2:238089/150‑4 (MQ=255) gcgcGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGGAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCGCGCAGCTCCTGCTtgt < 1:51279/150‑1 (MQ=255) cgGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCGCGCAGCTCCTGCTTGTGGt < 2:170441/150‑1 (MQ=255) gCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCAc > 1:1928489/1‑99 (MQ=255) gCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCAc < 2:1928489/99‑1 (MQ=255) gATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCGCGCAGCTcc > 1:1890837/1‑133 (MQ=255) gATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCGCGCAGCTcc < 2:1890837/133‑1 (MQ=255) cAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCGCGCAGCTCCTGCTTGTGGTTGCGCCAGGt < 1:157275/150‑1 (MQ=255) ggAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCCCGCCGCTCCTGCGTGTGGTTGCGCCAGGTGa > 2:1774750/1‑150 (MQ=255) gAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCGCGCAGCTCCTGCTTGTGGTTGCGCCAGGTGaa > 2:1522409/1‑150 (MQ=255) ccTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCGCGCAGCTCCTGCTTGTGGTTGCGCCAGGTGAAATAg < 2:1456466/150‑1 (MQ=255) gCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTAACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCGCGCAGCTCCTGCTTGTGGTTGCGCCAGGTGAAATAGGTATAGct > 1:1142769/1‑150 (MQ=255) tgCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTAC‑TCGAAATA‑TTCGCGCAGCTCCTGCTTGTGGTTGCGCCAGGTGAAATAGGt < 1:1595130/134‑1 (MQ=255) tgCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTAC‑TCGAAATA‑TTCGCGCAGCTCCTGCGTGTGGTTGCGCCAGGTGAAATAGGt > 2:1595130/1‑134 (MQ=255) cAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCGCGCAGCTCCTGCTTGTGGTTGCGCCAGGTGAAATAGGTATAGCTCTGTGCGTAGcc < 2:1332899/150‑1 (MQ=255) aG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCGCGCAGCTCCTGCTTGTGGTTGCGCCAGGTGAAATAg < 1:1372075/129‑1 (MQ=255) aG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCGCGCAGCTCCTGCTTGTGGTTGCGCCAGGTGAAATAg > 2:1372075/1‑129 (MQ=255) gAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTcgcg < 1:1169327/93‑1 (MQ=255) gAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTcgcg > 2:1169327/1‑93 (MQ=255) gAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCGCGCAGCTCCTGCTTGTGGTTGCGCCAGGTGAAATAGGTATAGCTCTGTGCGTAGCCGAc > 1:156241/1‑150 (MQ=255) aaaaCGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCGCGCAGCTCCTGCTTGTGGTTGCGCCAGGTGAAATAGGTATAGCTCTGTGCGTAGCCGACCt > 2:2100695/1‑150 (MQ=255) ctgTTGATTTCCGGTGTATTGATGAAGAAGTTGGGCCTGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCGCGCAGCTCCTGCTTGTGGTTGCGCCAGGTGAAATAGGTATAGCTCTGTGCGTAGCCGACCTTGccc < 2:1048425/148‑1 (MQ=255) ggTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCGCGCAGCTCCTGCTTGTGGTTGCGCCAGGTGAAATAGGTATAGCTCTGTGCGTAGCCGACCTTGCCCa < 1:1689403/150‑1 (MQ=255) ggTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCGCGCAGCTCCTGCTTGTGGTTGCGCCAGGTGAAATAGGTATAGCTCTGTGCGTAGCCGACCTTGCCCa < 2:710312/150‑1 (MQ=255) ttGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCGCGCAGCTCCTGCTTGTGGTTGCGCCAGGTGAAATAGGTATAGCTCTGTGCGTAGCCGACCTTGCCCaag > 1:1048425/1‑148 (MQ=255) tGTCCAGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCAcggcgg > 1:1402186/1‑52 (MQ=255) tGTCCAGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCAcggcgg < 2:1402186/52‑1 (MQ=255) tCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCGCGCAGCTCCTGCTTGTGGTTGCGCCAGGTGAAATAGGTATAGCTCTGTGCGTAGCCGACCTTGCCCAGGCGCGcc > 1:753472/1‑150 (MQ=255) tCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCGCGCAGCTCCTGCTTGTGGTTGCGCCAGGTGAAATAGGTATAGCTCTGTGCGTAGCCGACCTTGCCCAGGCGCGcc > 2:1553387/1‑150 (MQ=255) cGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGA‑TAGAAATA‑TTCGCGCAGCTCCTGCTTGTGGTTGCGCCAGGTGAAATAGGTATAGCTCTGTGCGTAGCCGACCTTGCCCAGGCGCGCcat > 2:1727525/1‑150 (MQ=255) ggTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGA‑TCAACAGCGTCGAAATA‑TTCGCGCAGCTCCTGCTTGTGGTTGCGCCAGGTGAAATAGGTATAGCTCTGTGCGTAGCCGACCTTGCCCAGGCGCGCcatc < 1:1194996/150‑1 (MQ=255) | TACTCCTCCTTGCCCGGCAACGGCGTGCCCTCGCACAGCTCGAAGCCCGAATACATGCCCCACAAGCCTGAGCCCATGGTCGCCAGCGCGGCACGGATCAGGAAACCTGCGCGGCCTGAGGTGTGCAG‑GAAAAACGGGTTGATGTCCGGTGTATTGACGAAGAAGTTGGGCCGGTAGCACTGGCTCCACGGCGGCTGATTGAGCTGC‑TCGAAATA‑TTCGCGCAGCTCCTGCTTGTGGTTGCGCCAGGTGAAATAGGTATAGCTCTGTGCGTAGCCGACCTTGCCCAGGCGCGCCATC > NC_002947/4584051‑4584347 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |