| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 461,033 | C→G | 5.4% | V479L (GTG→CTG) | pqqF ← | coenzyme PQQ synthesis protein F |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 461,033 | 0 | C | G | 5.4% | 355.2 / 8.8 | 111 | V479L (GTG→CTG) | pqqF | coenzyme PQQ synthesis protein F |
| Reads supporting (aligned to +/- strand): ref base C (51/54); new base G (4/2); total (55/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.20e-01 | |||||||||||
Only 100 of 115 total aligned reads displayed.
GGGCAGGCTACCCCGTACCGCGTCTGGCAGTTGCTTGAGCAGGGCCCTGATGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCAGCACACGCTGTAACGGCTGGCGCATAGGTGAAGG > NC_002947/460887‑461180 | gggCAGGCTACCCCGTACCGCGTCTGGCAGTTGCTTGAGCAGGGCCCTGATGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCActgc > 2:632373/1‑150 (MQ=255) gCTACCCCGTACCGCGTCTGGCAGTTGCTTGAGCAGGGCCCTGATGGGGCTCCAGGTCCCTGCGTTTTTCC‑ACCATGTCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTgg < 1:1694657/150‑1 (MQ=255) cTACCCCGTACCGCGTCTGGCAGTTGCTTGAGCAGGGCCCTGATGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGc < 2:2234028/150‑1 (MQ=255) tACCCCGTACCGCGTCTGGCAGTTGCTTGAGCAGGGCCCTGATGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCa < 1:1209130/150‑1 (MQ=255) tACCCCGTACCGCGTCTGGCAGTTGCTTGAGCAGGGCCCTGATGGGGAT‑CAGGGCCGGGGGCAGCGCCATGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCa > 1:266386/1‑150 (MQ=255) aCCCCGTACCGCGTCTGGCAGTTGCTTGAGCAGGGCCCTGATGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAg < 1:594942/150‑1 (MQ=255) aCCCCGTACCGCGTCTGGCAGTTGCTTGAGCAGGGCCCTGATGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCAGCAGCAGTGCTGCGGGCAg < 1:201544/150‑1 (MQ=255) cccGTACCGCGTCTGGCAGTTGCTTGAGCAGGGCCCTGATGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGc > 1:2168994/1‑150 (MQ=255) ccGTACCGCGTCTGGCAGTTGCTTGAGCAGGGCCCTGATGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGcc > 2:1195752/1‑150 (MQ=255) ccGTAAGGCGTCGGGCAGTTGCGTGAGCAGGGCCCTGATGGGGCT‑CAGGGCCGGGGTCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTAGCTTGAGCGTCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGcc > 2:146818/1‑150 (MQ=255) gcgTCTGGCAGTTGCTTGAGCAGGGCCCTGATGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAg < 1:1022565/150‑1 (MQ=255) gcgTCTGGCAGTTGCTTGAGCAGGGCCCTGATGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAg < 2:1562068/150‑1 (MQ=255) cgTCTGGCAGTTGCTTGAGCAGGGCCCTGATGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGt < 1:1970456/150‑1 (MQ=255) tGGCAGTTGCTTGAGCAGGGCCCTGATGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCaa < 2:423628/150‑1 (MQ=255) aggtGCTTGAGCAGGGCCCTGATGGGGAT‑CAGGGCCGGGGGCAGCGCGGGGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTgg < 2:929578/147‑2 (MQ=255) aGTTGCTTGAGCAGGGCCCTGATGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTTGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGc < 1:2028390/150‑1 (MQ=255) aGTTGCTTGAGCAGGGCCCTGATGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGc < 1:236314/150‑1 (MQ=255) ttGCTTGAGCAGGGCCCTGATGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCa < 2:1785476/150‑1 (MQ=255) ttGCTTGAGCAGGGCCCTGATGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTCCCACTGCCCGCAGCActgct < 2:2197638/121‑1 (MQ=255) ttGCTTGAGCAGGGCCCTGATGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTCCCACTGCCCGCAGCActgct > 1:2197638/1‑121 (MQ=255) tGCTTGAGCAGGGCCCTGATGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAg < 1:1624469/150‑1 (MQ=255) ttGAGCAGGGCCCTGATGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTAt > 1:1368654/1‑150 (MQ=255) gCAGGGCCCTGAAGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACAGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTccc < 1:2229909/150‑1 (MQ=255) gggCCCTGATGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCAAGAGTCTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCgg > 1:1227650/1‑150 (MQ=255) cccTGATGGGGAT‑CAGGGCCGGGGGAAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCAc > 1:427521/1‑150 (MQ=255) cTGATGGGGAT‑CAGGGCCGGGGGGAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCAct‑g < 2:38862/150‑1 (MQ=255) cTGATGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCGGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCAct‑g > 1:141607/1‑150 (MQ=255) tGATGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCAct‑gc > 1:104321/1‑150 (MQ=255) tGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGt > 2:2244134/1‑150 (MQ=255) gaggAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCACTGCAACTGCCCGTATTCCCCCGCACT‑TCTGtc > 2:138555/3‑149 (MQ=255) gggAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTAc > 2:1172169/1‑150 (MQ=255) t‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCa < 2:156668/124‑1 (MQ=255) t‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCa > 1:156668/1‑124 (MQ=255) t‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCa < 1:1681180/150‑1 (MQ=255) gggCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGa < 1:2104930/150‑1 (MQ=255) ggCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGCTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAg < 1:1403022/150‑1 (MQ=255) cAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACaa < 2:266386/150‑1 (MQ=255) cAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACaa < 1:1156372/150‑1 (MQ=255) ggCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCAct < 2:562432/113‑1 (MQ=255) ggCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCAct > 1:562432/1‑113 (MQ=255) gccagcAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACCGCAGTTGCACGGAGGCGCGGTCACAACGTTCCt < 2:141607/150‑1 (MQ=255) ccagcAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTg > 1:1873332/1‑150 (MQ=255) ccagcAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTg > 2:518130/1‑150 (MQ=255) ccagcAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTg < 1:518130/150‑1 (MQ=255) gcAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCt > 1:469346/1‑146 (MQ=255) gcAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCt < 2:469346/146‑1 (MQ=255) aCTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTACAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTgg > 1:255134/1‑150 (MQ=255) cTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCTCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGgc < 1:2071874/150‑1 (MQ=255) tGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTgg < 2:681999/148‑1 (MQ=255) gCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGcc > 2:1981850/1‑150 (MQ=255) gTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAggg > 2:1141209/1‑150 (MQ=255) tGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGc < 1:316361/150‑1 (MQ=255) tGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGc < 1:1424015/150‑1 (MQ=255) gCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCt < 1:947949/150‑1 (MQ=255) gCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCACTAACTACGTTCCTGCAGTGGCGCCAGGGCCt < 1:652380/150‑1 (MQ=255) ttGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGt > 1:789420/1‑150 (MQ=255) ttGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGt > 1:908239/1‑150 (MQ=255) ttGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGt > 2:116861/1‑150 (MQ=255) gAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGcc < 2:2054748/139‑1 (MQ=255) gAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGcc > 1:2054748/1‑139 (MQ=255) gCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCa < 2:1873332/150‑1 (MQ=255) aTCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCAGc < 1:1195752/150‑1 (MQ=255) aTCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCAGc < 1:116861/150‑1 (MQ=255) tCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAg < 2:912582/136‑1 (MQ=255) tCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAg > 1:912582/1‑136 (MQ=255) caaggccaaggcTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCAGcac > 1:1544589/1‑150 (MQ=255) aaggccaaggcTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCAGcaca > 1:1629206/1‑150 (MQ=255) aggccaagtcTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCAGCacac > 1:98313/1‑150 (MQ=255) aggccaaggcTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCAGCacac > 2:1829822/1‑150 (MQ=255) gccaaggcTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTg < 2:1161561/119‑1 (MQ=255) gccaaggcTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTg > 1:1161561/1‑119 (MQ=255) ccaaggcTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACgaag > 1:172305/1‑95 (MQ=255) ccaaggcTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCGGCACACGCt > 1:394179/1‑150 (MQ=255) ccaaggcTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCAGCACACGCt > 2:1206042/1‑150 (MQ=255) ccaaggcTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGAAg < 2:172305/98‑1 (MQ=255) aaggcTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAg > 2:472862/1‑119 (MQ=255) aggcTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCAGCACACGCTGTa < 1:1141209/150‑1 (MQ=255) ggcTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTccc < 2:2057824/65‑1 (MQ=255) ggcTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTccc > 1:2057824/1‑65 (MQ=255) ggcTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAAc > 1:2209210/1‑107 (MQ=255) ggcTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAAc < 2:2209210/107‑1 (MQ=255) tGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACTCGCTG‑ACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCAGCACACGCTGTAACGGc < 1:632373/150‑1 (MQ=255) ttCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCAGCACACGCTGTAACGGCTg > 1:1136284/1‑150 (MQ=255) tCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCAGCACACGCTGTAACGGCTgg > 1:1457265/1‑150 (MQ=255) tCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCAGCACACGCTGTAACGGCTgg < 1:335864/150‑1 (MQ=255) cACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCAc < 1:1760000/81‑1 (MQ=255) tGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTc < 1:578140/123‑1 (MQ=255) tGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCAGCACACGCTGTAACGGCTGGCGCAt > 2:7293/1‑150 (MQ=255) tGCCAGCAGCAGTGCTGCGGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCAGCACACGCTGTAACGGCTGGCGCAt > 1:1300533/1‑150 (MQ=255) cccGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCAGCACACGCTGTAACGGCTGGCGCATAg > 1:492491/1‑150 (MQ=255) cccGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCAGCACACGCTGTAACGGCTGGCGCATAg > 1:1473093/1‑150 (MQ=255) cccGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCAGCACACGCTGTAACGGCTGGCGCATAg > 1:2276611/1‑150 (MQ=255) ccagcagcaGTGCTGCGGGCAGTCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCa > 1:698909/4‑102 (MQ=255) ccagcagcaGTGCTGCGGGCAGTCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCa < 2:698909/99‑1 (MQ=255) cagcagcaGTGCTGCGGGCAGTCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCAGCACACGCTGTAACGGCTGGCGCATAgg > 2:2310496/3‑150 (MQ=255) cGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCAGCACACGCTGTAACGGCTGGCGCATAGGt < 2:427521/150‑1 (MQ=255) gcagcaCTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACt < 2:1414610/63‑1 (MQ=255) ggaCTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCAGCACACGCTGTAACGGCTGGCGCATAGGTGAAg < 2:227190/148‑1 (MQ=255) caCTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCAGCACACGCTGTAACGGCTGGCGCATAGGTGAAgg > 2:1264296/1‑150 (MQ=255) aCTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGgc > 1:1115654/1‑99 (MQ=255) | GGGCAGGCTACCCCGTACCGCGTCTGGCAGTTGCTTGAGCAGGGCCCTGATGGGGAT‑CAGGGCCGGGGGCAGCGCCGTGCAGGGCAGCCAGCAACTGGCAGGTGGCTTGAGCATCAAGGCCAAGGCTTGTTCCACTGCCCGCAGCACTGCTGCTGGCAGGCCGGCGCAGTGCAACTGCCAGTATTCCCCGGCACT‑GCTGTACTGCAGTTGCACGGAGGCGCGGTCACAACGTTCCTGCAGTGGCGCCAGGGCCTGTTCCAGCACACGCTGTAACGGCTGGCGCATAGGTGAAGG > NC_002947/460887‑461180 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |