| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,192,797 | C→G | 5.5% | intergenic (+130/‑72) | PP_4572 → / → PP_4573 | hypothetical protein/AAA family ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,192,797 | 0 | C | G | 5.5% | 228.0 / 3.2 | 73 | intergenic (+130/‑72) | PP_4572/PP_4573 | hypothetical protein/AAA family ATPase |
| Reads supporting (aligned to +/- strand): ref base C (34/34); new base G (2/2); total (37/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.76e-01 | |||||||||||
AGCGCCGAAGTCTGACTGAGACAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCT > NC_002947/5192649‑5192942 | aGCGCCGAAGTCTGACTGAGACAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGccc < 1:763587/150‑1 (MQ=255) aGTCTGACTGAGACAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAAc > 1:1124695/1‑149 (MQ=255) aGTCTGACTGAGACAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAAc < 2:1124695/149‑1 (MQ=255) gagaCAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGgc < 2:2027359/150‑1 (MQ=255) cAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCgg < 1:2052101/150‑1 (MQ=255) ggCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGCCCCCGCGTTATAGTCGGAAACACATTCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCggg < 2:2240747/149‑1 (MQ=255) aGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTTGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCggg < 2:1348988/150‑1 (MQ=255) aGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCttatt > 1:319975/1‑141 (MQ=255) aGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCttatt < 2:319975/141‑1 (MQ=255) aGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCggg < 1:272626/150‑1 (MQ=255) ccgatctcATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTAc < 1:501872/143‑1 (MQ=255) aCGGGGCATTCAGGGACTGAATACCCGGTCGGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTAcc < 2:117130/150‑1 (MQ=255) aTTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGaa > 1:1406774/1‑149 (MQ=255) aTTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGaa < 2:1406774/149‑1 (MQ=255) aTTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAag > 1:1735827/1‑150 (MQ=255) aTTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCAT‑ACAACCTTCTTTGGAGTGGGTCAACCcgagcgg > 2:501872/1‑145 (MQ=255) ttCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAAcc < 1:2201777/122‑1 (MQ=255) ttCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAAcc > 2:2201777/1‑122 (MQ=255) aGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTAGCGGGTAAACCCGCCCCT‑ACAACCTTATTAgg < 2:1799352/127‑1 (MQ=255) aGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTAGCGGGTAAACCCGCCCCT‑ACAACCTTATTAgg > 1:1799352/1‑127 (MQ=255) ggACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAAcc < 1:1999177/117‑1 (MQ=255) ggACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAAcc > 2:1999177/1‑117 (MQ=255) ggACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGccc > 1:571620/1‑150 (MQ=255) gACTGAATACCCTGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCgg < 2:762482/129‑1 (MQ=255) gACTGAATACCCTGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCgg > 1:762482/1‑129 (MQ=255) gcccGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGccc > 2:1607954/2‑150 (MQ=255) ccGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCttatt < 2:795752/111‑1 (MQ=255) ccGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCttatt < 1:1064890/111‑1 (MQ=255) ccGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCttatt > 1:795752/1‑111 (MQ=255) ccGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCttatt > 2:1064890/1‑111 (MQ=255) gTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAAc > 1:458570/1‑150 (MQ=255) tGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTCACCaga < 2:31695/150‑1 (MQ=255) tGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACaga > 2:1291502/1‑150 (MQ=255) tGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACaga < 2:458570/150‑1 (MQ=255) gCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATGAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACagag < 2:1492390/150‑1 (MQ=255) gTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGa < 2:1772834/150‑1 (MQ=255) gccgccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAAccc > 1:317393/1‑150 (MQ=255) cgccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCACCT‑ACAACCTTATTAGGCGCGGGTGTACCCGCGCAGACGCCCGGAAAGCCCTAGACAGAGGGCAAAcaccc > 2:344580/1‑150 (MQ=38) gccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCa < 1:1291502/150‑1 (MQ=255) gccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCa > 2:53747/1‑150 (MQ=255) gccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCa > 2:785001/1‑150 (MQ=255) gccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCa < 1:53747/150‑1 (MQ=255) ccccGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGt > 2:2101535/1‑150 (MQ=255) cccGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGtt < 1:2101535/150‑1 (MQ=255) cgTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGaa < 1:785001/150‑1 (MQ=255) aaaTCCAGATAATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACagag < 2:888491/111‑1 (MQ=255) aaaTCCAGATAATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACagag > 1:888491/1‑111 (MQ=255) aaaTCAAGATCATGTGCTGCCTGTTCGGGCCGCTTCGCGTGGGAACCCGCCCCG‑ACAACCTTATTAGGCGCGGGTTTCCCCGCGAAGAGGGCCACAAAGTCCTAAACAGAAAACATATCCCCATGAAAGTCGAAGGCACCCGCGACTACg > 2:2259838/1‑150 (MQ=255) aTCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACACCCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTc > 1:526580/1‑150 (MQ=255) aTCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCcaca > 1:1690781/1‑150 (MQ=255) cATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGa > 1:2087436/1‑123 (MQ=255) cATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGa < 2:2087436/123‑1 (MQ=255) tgtgCTGCCTGTTCGGGCCTTTCCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGaa < 1:143275/122‑1 (MQ=255) tgtgCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGaa > 2:143275/1‑122 (MQ=255) tgctgcCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGGAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCCACTACGTCGCCACAGATGAc > 2:2332837/1‑150 (MQ=255) gctgcCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGAcc > 1:2205893/1‑150 (MQ=255) gcCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGAACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGa < 2:1735827/150‑1 (MQ=255) tGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGAc < 1:357890/125‑1 (MQ=255) tGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGAc > 2:357890/1‑125 (MQ=255) gTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACt < 1:1607954/150‑1 (MQ=255) tCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGCTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTgg < 1:2259838/150‑1 (MQ=255) gCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTT‑GTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGt > 2:1880731/1‑150 (MQ=21) ctctTCGCGGGTAAACCCGCGCCT‑AATAAGGTTGTAGGGGCGGGTTTNCCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCt > 1:608065/1‑136 (MQ=18) ctctTCGCGGGTAAACCCGCGCCT‑AATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCt < 2:608065/136‑1 (MQ=21) ctctTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCa > 1:1358476/1‑93 (MQ=255) ctctTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCa < 2:1358476/93‑1 (MQ=255) gcgGGTAAACCCGCGCCT‑AATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCgg < 1:1880731/150‑1 (MQ=25) tAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCAtt > 2:2024155/1‑150 (MQ=255) aCCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGa > 2:2031671/1‑101 (MQ=255) aCCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGa < 1:2031671/101‑1 (MQ=255) cccGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTAccc > 2:2271338/1‑150 (MQ=255) ccGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCt > 2:1212983/1‑150 (MQ=255) cGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGaa > 2:1126181/1‑87 (MQ=255) cGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGaa < 1:1126181/87‑1 (MQ=255) | AGCGCCGAAGTCTGACTGAGACAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCT‑ACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCT > NC_002947/5192649‑5192942 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |