Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 469,777 C→G 6.5% G395R (GGT→CGT)  PP_0386 ← sensory box protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947469,7770CG 6.5% 239.9 / 7.1 78G395R (GGT→CGT) PP_0386sensory box protein
Reads supporting (aligned to +/- strand):  ref base C (40/32);  new base G (2/3);  total (43/35)
Fisher's exact test for biased strand distribution p-value = 6.54e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.15e-01

CCGAGGCGAACTTCTGTTCGGACAGGCGCAGGGCGTCCTCCGTGCGCTTGGTTTCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACTCAATGGGTAGCCA  >  NC_002947/469636‑469925
                                                                                                                                              |                                                                                                                                                    
ccGAGGCGAACTTCTGTTCGGACATGCGCAGGGCGTCCTCCGTGCGCTTGGTTTCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGccc                                                                                                                                              <  1:628680/150‑1 (MQ=255)
   aGGCGAACTTCTGTTCGGACAGGCGCAGGGCGTCCTCCGTGCGCTTGGTTTCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACGGTCAGcccctc                                                                                                                                           <  2:922019/150‑4 (MQ=255)
    ggCGAACTTCTGTTCGGACAGGCGCAGGGCGTCCTCCGTGCGCTTGGTTTCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGTTG‑ACCGTCAGCCCGGAt                                                                                                                                          >  1:93952/1‑150 (MQ=255)
          cTTCTGTTCGGACAGGCGCAGGGCGTCCTCCGTGCGCTTGGTTTCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCAccc                                                                                                                                     >  1:2266575/1‑149 (MQ=255)
          cTTCTGTTCGGACAGGCGCAGGGCGTCCTCCGTGCGCTTGGTTTCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCAccc                                                                                                                                     <  2:2266575/149‑1 (MQ=255)
          cTTCTGTTCGGACAGGCGCAGGGCGTAGTCGGTGCGCTTGGTTTCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCg                                                                                                                                    <  1:1653055/150‑1 (MQ=255)
           ttCTGTTCGGACAGGCGTCGGGCGCCCTCCGTGCGCTTGGTTTCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGGGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCgg                                                                                                                                   <  2:541642/150‑1 (MQ=255)
               gTTCGGACAGGCGCAGGGCGTCCTCCGTGCGCTTGGTTTCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACGGTCAGcccctctg                                                                                                                                         <  2:1635534/140‑6 (MQ=255)
               gTTCGGACAGGCGCAGGGCGTCCTCCGTGCGCTTGGTTTCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACGGTCAGcccctctg                                                                                                                                         >  1:1635534/1‑135 (MQ=255)
                         gcgcAGGGCGTCCTCCGTGCGCTTGGTTTCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCtgtg                                                                                                                     >  2:773171/1‑150 (MQ=255)
                          cgcAGGGCGTCCTCCGTGCGCTTGGTTTCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTgg                                                                                                                    <  2:222449/150‑1 (MQ=255)
                            cAGGGCGTCCTCCGTGCGCTTGGTTTCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTc                                                                                                                  >  2:2069077/1‑150 (MQ=255)
                             aGGGCGTCCTCCGTGCGCTTGGTTTCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTcg                                                                                                                 >  2:1329939/1‑150 (MQ=255)
                              gggCGTCCTCCGTGCGCTTGGTTTCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTcgc                                                                                                                <  1:2069077/150‑1 (MQ=255)
                                gCGTCCTCCGTGCGCTTGGTTTCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCgcgc                                                                                                              <  2:190806/150‑1 (MQ=255)
                                 cGTCCTCCGTGCGCTTGGTTTCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGcc                                                                                                             <  1:897640/150‑1 (MQ=255)
                                     ctccGTGCGCTTGGTTTCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGc                                                                                                         >  1:1027936/1‑150 (MQ=255)
                                     ctccGTGCGCTTGGTTTCAATGATGGCGAGTATCAGCCCGCGCATCACTGGCGGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGc                                                                                                         >  1:53441/1‑150 (MQ=255)
                                           gcgcTTGGTTTCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGt                                                                                                   <  1:2115045/150‑1 (MQ=255)
                                              cTTGGTTTCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCt                                                                                                                        >  1:1941942/1‑126 (MQ=255)
                                              cTTGGTTTCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCt                                                                                                                        <  2:1941942/126‑1 (MQ=255)
                                              cTTGGTTTCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGtctc                                                                                                >  1:1478008/1‑150 (MQ=255)
                                                   tttCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGt                                                                                           >  1:2260329/1‑150 (MQ=255)
                                                           aTGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGTTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAg                                                                                   <  2:93952/150‑1 (MQ=255)
                                                             gTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGc                                                                                 >  2:1792785/1‑150 (MQ=255)
                                                              tCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCCCTGTCGCAGTAGGcc                                                                                >  2:1180445/1‑150 (MQ=255)
                                                               cGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCt                                                                               <  2:978626/150‑1 (MQ=255)
                                                                gATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGc                                                                                 <  2:1244990/147‑1 (MQ=255)
                                                                gATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGc                                                                                 >  1:1244990/1‑147 (MQ=255)
                                                                gATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTg                                                                              >  1:2307894/1‑150 (MQ=255)
                                                                gATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTg                                                                              >  2:1058059/1‑150 (MQ=255)
                                                                gATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGGCGCGCCCCGCTGCGGTCTCGCGGTCGCAGTAGGCCTg                                                                              >  1:2089032/1‑150 (MQ=255)
                                                                 atcatcAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGa                                                                             <  1:1426858/150‑1 (MQ=255)
                                                                   catcaGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCTGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCTCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGc                                                                           <  2:813764/150‑1 (MQ=255)
                                                                     tcaGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCtaaactc                                                                         <  2:1162677/150‑7 (MQ=255)
                                                                        gCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCaga                                                                      >  2:2074218/1‑150 (MQ=255)
                                                                          ccGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAgc                                                                    <  2:53441/150‑1 (MQ=255)
                                                                              gcATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGt                                                                                           >  2:1913285/1‑123 (MQ=255)
                                                                              gcATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGt                                                                                           <  1:1913285/123‑1 (MQ=255)
                                                                                   aCTGGCTGGTGGCCGTGCTCGATCATGACGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGtcctcc                                                           >  1:62319/1‑150 (MQ=255)
                                                                                     tggctggTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCgg                                                         <  2:1542215/150‑1 (MQ=255)
                                                                                       gctggTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGt                                                       >  2:808713/1‑150 (MQ=255)
                                                                                             ggCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTcgc                                                                                                                >  2:2192508/1‑87 (MQ=255)
                                                                                             ggCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTcgc                                                                                                                <  1:2192508/87‑1 (MQ=255)
                                                                                                      cGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCagag                                                                     >  1:1735824/1‑121 (MQ=255)
                                                                                                      cGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCGGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCagag                                                                     <  2:1735824/121‑1 (MQ=255)
                                                                                                       gATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCa                                       >  1:1302741/1‑150 (MQ=255)
                                                                                                        aTCATGCTGACGATATTGCGTACGCAGAGGGGCTG‑ACTGTCATCCCGGATCACCTGGTAGTCCAGGATGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCTCGTCCTCCGGGTGCAGGATGATGCGCCAg                                      >  2:159435/1‑150 (MQ=255)
                                                                                                          cATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGaa                                    >  1:1108903/1‑150 (MQ=255)
                                                                                                            tGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAAc                                  >  2:1587145/1‑150 (MQ=255)
                                                                                                             gCTGACGATATTGCGTACCCAGAGGGGCTG‑AGCGTCCGTCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAAcc                                 <  1:123194/150‑1 (MQ=255)
                                                                                                              cTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCg                                >  1:1736121/1‑150 (MQ=255)
                                                                                                               tGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCGGTAGGCCTGa                                                                             >  1:1056241/1‑104 (MQ=255)
                                                                                                               tGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGa                                                                             <  2:1056241/104‑1 (MQ=255)
                                                                                                               tGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCgg                               >  2:774105/1‑150 (MQ=255)
                                                                                                                gACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCGCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCggg                              <  1:1329939/150‑1 (MQ=255)
                                                                                                                   gATATTGCGTACCCAGAGGGGCTGAACCGGGTG‑CCGGATCACCCGGTAGTCCAGGCTGTGGTCGAGCCCCGCTGCGTTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCt                           >  1:60790/1‑150 (MQ=255)
                                                                                                                   gATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCt                           >  1:2172434/1‑150 (MQ=255)
                                                                                                                     tatTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGa                         >  2:1437197/1‑150 (MQ=255)
                                                                                                                      atTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGGGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAg                        >  1:2008397/1‑150 (MQ=255)
                                                                                                                       ttGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGc                       >  2:1386494/1‑150 (MQ=255)
                                                                                                                           gTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCg                                                          >  1:241861/1‑111 (MQ=255)
                                                                                                                           gTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCg                                                          <  2:241861/111‑1 (MQ=255)
                                                                                                                             aCCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTc                  <  1:570271/149‑1 (MQ=255)
                                                                                                                             aCCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTc                  >  2:570271/1‑149 (MQ=255)
                                                                                                                             aCCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCa                 <  1:1902627/150‑1 (MQ=255)
                                                                                                                              cccAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCAc                >  2:1507309/1‑150 (MQ=255)
                                                                                                                               ccAGCGGGGCTG‑ACCGTGAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACt               <  1:2025532/150‑1 (MQ=255)
                                                                                                                               ccAGAGGTGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACt               >  2:392164/1‑150 (MQ=255)
                                                                                                                               ccAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGc                             >  2:1712670/1‑136 (MQ=255)
                                                                                                                               ccAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGc                             <  1:1712670/136‑1 (MQ=255)
                                                                                                                               ccAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCAca               >  1:2210931/1‑149 (MQ=255)
                                                                                                                                   ccgggCTG‑ACGGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGt                   <  1:1477938/140‑1 (MQ=255)
                                                                                                                                   ccgggCTG‑ACGGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGt                   >  2:1477938/3‑142 (MQ=255)
                                                                                                                                   agGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACTCAAt           <  2:2307894/150‑1 (MQ=255)
                                                                                                                                   agGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACTCAAt           <  1:392164/150‑1 (MQ=255)
                                                                                                                                    ggggCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACTCAATg          <  1:1058059/150‑1 (MQ=255)
                                                                                                                                       gCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACTCAATGGGt       >  2:597899/1‑150 (MQ=255)
                                                                                                                                             ccGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACTCAATGGGTAGCCa  >  1:2241383/1‑150 (MQ=255)
                                                                                                                                              |                                                                                                                                                    
CCGAGGCGAACTTCTGTTCGGACAGGCGCAGGGCGTCCTCCGTGCGCTTGGTTTCACTGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTG‑ACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACTCAATGGGTAGCCA  >  NC_002947/469636‑469925

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑