| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,354,719 | G→A | 5.3% | T7I (ACC→ATC) noncoding (4/97 nt) |
rpsO ← PP_mr54 ← |
30S ribosomal protein S15 S15 regulatory region |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,354,719 | 0 | G | A | 5.3% | 280.9 / 4.3 | 94 | T7I (ACC→ATC) noncoding (4/97 nt) | rpsO PP_mr54 | 30S ribosomal protein S15 S15 regulatory region |
| Reads supporting (aligned to +/- strand): ref base G (46/43); new base A (3/2); total (49/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.64e-01 | |||||||||||
CTTGTTGATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGCCGACGCGGCGCAATGCGC > NC_002947/5354571‑5354868 | cTTGTTGATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGt < 1:349707/150‑1 (MQ=255)cTTGTTGATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGt > 1:227186/1‑150 (MQ=255)cTTGTTGATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGCGAACGATGTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGt > 2:1355464/1‑150 (MQ=255) ttgATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCaa > 2:1526569/1‑150 (MQ=255) tgATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGt < 1:1158834/145‑1 (MQ=255) tgATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGt > 2:1158834/1‑145 (MQ=255) gATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGt < 2:1323800/144‑1 (MQ=255) gATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGt > 1:1323800/1‑144 (MQ=255) ttGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCGACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGcc > 1:2041868/1‑150 (MQ=255) tGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCGACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCa < 2:2041868/150‑1 (MQ=255) tGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCa < 1:1545688/150‑1 (MQ=255) gcagAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAGCGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAAt < 2:951353/150‑1 (MQ=255) gcagAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAAt > 2:1648084/1‑150 (MQ=255) cagAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATc > 2:150061/1‑150 (MQ=255) gagCAACCTGCACTTCCGGGCTACCGGTATCGTCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATccc < 2:1097751/150‑1 (MQ=255) agCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCt < 2:705737/150‑1 (MQ=255) cAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGt < 2:2037008/150‑1 (MQ=255) aCCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCATTTTCTTAAACGCTGCGGGCCATGTGGCTTCTCCTGATAACGGATACCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCAGTAt > 2:246221/1‑150 (MQ=255) cTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTAt > 1:1579649/1‑148 (MQ=255) cTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTAt < 2:1579649/148‑1 (MQ=255) cTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATta > 2:341888/1‑150 (MQ=255) gCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATtaat > 2:1872672/1‑150 (MQ=255) aCTTCCGGGCTACCGGTATCGCCGGCGGCGTCCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATtaataa > 2:202655/1‑150 (MQ=255) ttCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATaaaa < 1:679129/150‑1 (MQ=255) ggCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGgt < 2:507108/150‑1 (MQ=255) aTCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGCGCCCGCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGc < 1:1312201/150‑1 (MQ=255) gcggcTTGCTGATATTAGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTAAAAAAAAAAAAAAGGTGTGACCGTGCCTACTGa < 2:442299/150‑1 (MQ=255) gcTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAg < 2:1245490/150‑1 (MQ=255) gcTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAg > 2:363139/1‑150 (MQ=255) ttGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGACCCCGCATGCGGGATccgt > 2:2046152/1‑89 (MQ=255) ttGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGACCCCGCATGCGGGATccgt < 1:2046152/91‑3 (MQ=255) gCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATTCGGGGTCCAATAGGCCAgg > 1:2035994/1‑98 (MQ=255) gCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAgg < 2:2035994/98‑1 (MQ=255) cTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCAcc < 1:150061/150‑1 (MQ=255) gATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCt < 1:341888/150‑1 (MQ=255) tatTCGTTAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTg < 2:1179710/150‑1 (MQ=255) ttCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGAt < 2:1545598/150‑1 (MQ=255) cAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGt < 1:67683/150‑1 (MQ=255) aaCGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTg < 2:1125610/150‑1 (MQ=255) aaCGATCTGAGCTTTTCCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTg > 2:1383792/1‑150 (MQ=255) cGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTggg < 2:227269/150‑1 (MQ=255) gATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCgggg < 2:2270185/68‑1 (MQ=255) gATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCgggg > 1:2270185/1‑68 (MQ=255) gATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTgggg > 1:1673778/1‑150 (MQ=255) tGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCg < 1:1872672/150‑1 (MQ=255) tGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCg > 2:977463/1‑150 (MQ=255) gAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCgg > 1:1501953/1‑150 (MQ=255) aGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGc < 1:1355464/150‑1 (MQ=255) ttttCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACt > 2:1056537/1‑150 (MQ=255) ttcAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGgtg > 2:1415066/1‑96 (MQ=255) ttcAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGgtg < 1:1415066/96‑1 (MQ=255) ttcAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTg > 2:1124136/1‑150 (MQ=255) ttcAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTg > 2:1709673/1‑150 (MQ=255) ttcAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGACCCCGCATGCGGGATcc < 1:1059307/56‑1 (MQ=38) ttcAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGACCCCGCATGCGGGATcc > 2:1059307/1‑56 (MQ=38) tcAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGa < 1:1526569/150‑1 (MQ=255) aaCGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGTGACGAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGAcc > 1:694469/1‑150 (MQ=255) aaCGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGAcc > 2:1245921/1‑150 (MQ=255) cTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCcgc < 2:227186/150‑1 (MQ=255) aGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGt > 2:2036747/1‑150 (MQ=255) gggCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCggca < 1:1383792/150‑3 (MQ=255) ccATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCg > 1:1579859/1‑150 (MQ=255) ccATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCg < 2:1673778/150‑1 (MQ=255) cATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCgg < 1:363139/150‑1 (MQ=255) cATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCgg < 1:1306789/150‑1 (MQ=255) gCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGc < 1:1623356/126‑1 (MQ=255) gCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGc > 2:1623356/1‑126 (MQ=255) gCTTCTCCTGATAACGGATCCCACATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTc > 2:740834/1‑150 (MQ=255) cTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTcc > 2:86314/1‑150 (MQ=255) tctcCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTCGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTccga < 1:1124136/150‑1 (MQ=255) ctcCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTggg > 1:1160242/1‑109 (MQ=255) ctcCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTccgac > 2:1215016/1‑150 (MQ=255) ctcCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTccgac < 1:995631/150‑1 (MQ=255) ctcCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCATTGATGCCGTtgg < 2:1160242/109‑1 (MQ=255) cTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACa < 2:662240/86‑1 (MQ=255) cTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACa > 1:662240/1‑86 (MQ=255) tGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTGATTCCGACCGaa > 2:1170510/1‑150 (MQ=255) tAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCa > 2:761391/1‑150 (MQ=255) aaCGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAg > 2:2070837/1‑150 (MQ=255) ttggaccccGCATGCGGGATCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCTGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGc > 2:474480/7‑150 (MQ=255) aCGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGc > 1:962265/1‑150 (MQ=255) gATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCaa < 2:355504/106‑1 (MQ=255) gATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCaa > 1:355504/1‑106 (MQ=255) gATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGCCGa < 1:202655/150‑1 (MQ=255) cccGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCa > 2:323940/1‑142 (MQ=255) cccGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCa < 1:323940/142‑1 (MQ=255) ccGCATGCGGGGTCCAATAGGGCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGCCGAcgcg > 2:31623/1‑150 (MQ=255) ccGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCt > 1:575360/1‑108 (MQ=255) ccGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCt > 1:574491/1‑108 (MQ=255) ccGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCt < 2:574491/108‑1 (MQ=255) ccGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCt < 2:575360/108‑1 (MQ=255) cGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAgg > 2:2251227/1‑52 (MQ=255) cGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAgg < 1:2251227/52‑1 (MQ=255) cGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGCCGACgcgg > 2:363894/1‑150 (MQ=255) cGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGCCGACgcgg > 1:889652/1‑150 (MQ=255) gCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACAGAATCAGCCGACgcggc > 1:1651261/1‑150 (MQ=255) gTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGCCGACGCGGCGCAATgcgc < 2:1579859/150‑1 (MQ=255) | CTTGTTGATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGCCGACGCGGCGCAATGCGC > NC_002947/5354571‑5354868 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |