Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,448,382 C→T 6.3% A104V (GCC→GTC)  PP_4785 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,448,3820CT 6.3% 178.4 / 2.2 63A104V (GCC→GTC) PP_4785hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (27/32);  new base T (2/2);  total (29/34)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.25e-01

GCAGACGGCGACTGCGGGGGATGCCCAGGCGCAATTCGAACTGGGCGAGTATTACTACACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTGGACATGGCCGACGAAGTGACCGAGCAAATGCCCCGCGACGAACTGGAGCATGC  >  NC_002947/5448233‑5448529
                                                                                                                                                     |                                                                                                                                                   
gCAGACGGCGACTGCGGGGGATGCCCAGGCGCAATTCGAACTGGGCGAGTATTACTACACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGc                                                                                                                                                     <  2:1205514/150‑1 (MQ=255)
    aCGGCGACTGCGGGGGATGCCCAGGCGCAATTCGAACTGGGCGAGTATTACTACACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATg                                                                                                                                                 >  2:173863/1‑150 (MQ=255)
          aCTGCGGGGGATGCCCAGGCGCAATTCGAACTGGGCGAGTATTACTACACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGttcttc                                                                                                                                           <  1:79163/150‑1 (MQ=255)
            tGCGGGGGATGCCCAGGCGCAATTCGAACTGGGCGAGTATTACTACACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCa                                                                                                                                         >  2:197613/1‑150 (MQ=255)
             gCGGGGGATGCCCAGGCGCAATTCGAACTGGGCGAGTATTACTACACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCAt                                                                                                                                        <  1:1441182/150‑1 (MQ=255)
               gggggATGCCCAGGCGCAATTCGAACTGGGCGAGTATTACTACACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATgg                                                                                                                                      <  2:878010/150‑1 (MQ=255)
               gggggATGCCCAGGCGCAATTCGAACTGGGCGAGTATTACTACACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATgg                                                                                                                                      <  2:877837/150‑1 (MQ=255)
               gggggATGCACAGGCGCAATTCGAACTGGGGGAGTATTACTACACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATgg                                                                                                                                      <  1:197613/150‑1 (MQ=255)
                  ggATGCCCAGGCGCAATTCGAACTGGGCGAGTATTACTACACGCAAACGCCAAAAAACCTGGGCGAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGa                                                                                                                                   >  1:1116629/1‑150 (MQ=255)
                   gATGCCCAGGCGCAATTCGAACTGGGCGAGTATTACTACACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGaa                                                                                                                                  <  1:805369/150‑1 (MQ=255)
                    aTGCCCAGGCGCAATTCGAACTGGGCGAGTATTACTACACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAg                                                                                                                                 <  1:1093188/150‑1 (MQ=255)
                     tGCCCAGGCGCAATTCGAACTGGGCGAGTATTACTACACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAgg                                                                                                                                <  1:352227/150‑1 (MQ=255)
                              gcAATTCGAACTGGGCGAGTATTACTACACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGAAGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGc                                                                                                                       >  1:880708/1‑150 (MQ=255)
                                  ttCGAACTGGGCGAGTATTACTACACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCtaac                                                                                                                   >  1:344977/1‑150 (MQ=255)
                                  ttCGAACTGGGCGAGTATTACTACACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCcaac                                                                                                                   >  2:475093/1‑150 (MQ=255)
                                        cTGGGCGAGTATTACTACACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCTAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTg                                                                                                             <  1:484213/150‑1 (MQ=255)
                                           ggCGAGTATTACTACACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAg                                                                                                          <  2:530951/150‑1 (MQ=255)
                                             cGAGTATTACTACACGCAAACTCAAAAAAACCTGGGCAAAGCCCTGTACTGGTTCCAGAAGGCCTCGAACCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGc                                                                                                        <  1:736390/150‑1 (MQ=255)
                                                    tactacACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCGAGGc                                                                                                                       <  1:1754224/128‑1 (MQ=255)
                                                    tactacACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCGAGGc                                                                                                                       >  2:1754224/1‑128 (MQ=255)
                                                      ctacACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCaa                                                                                                                          <  2:1470175/123‑1 (MQ=255)
                                                      ctacACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCaa                                                                                                                          >  1:1470175/1‑123 (MQ=255)
                                                       tacACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCcaa                                                                                                                    <  1:1787173/128‑1 (MQ=255)
                                                       tacACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCcaa                                                                                                                    >  2:1787173/1‑128 (MQ=255)
                                                            gCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGaa                                                                                         >  1:856925/1‑150 (MQ=255)
                                                                  gCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTAc                                                                                                    >  2:424528/1‑133 (MQ=255)
                                                                  gCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTAc                                                                                                    <  1:424528/133‑1 (MQ=255)
                                                                  gCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGc                                                                                   <  2:1376750/150‑1 (MQ=255)
                                                                    cAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGc                                                                                                                                                     <  1:2198454/82‑1 (MQ=255)
                                                                    cAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGc                                                                                                                                                     >  2:2198454/1‑82 (MQ=255)
                                                                         aaCCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTc                                                                            >  2:1962550/1‑150 (MQ=255)
                                                                               ggCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGgc                                                                      <  1:475093/150‑1 (MQ=255)
                                                                                gCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGgcg                                                                     >  1:2111248/1‑150 (MQ=255)
                                                                                 cAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGgcgc                                                                    <  1:173863/150‑1 (MQ=255)
                                                                                  aaaGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGcc                                                                   >  1:1860003/1‑150 (MQ=255)
                                                                                                gTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTg                                                       <  2:759711/148‑1 (MQ=255)
                                                                                                gTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTg                                                       >  1:759711/1‑148 (MQ=255)
                                                                                                gTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTGGa                                                     >  1:1784247/1‑150 (MQ=255)
                                                                                                   ccAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTGGACAt                                                  <  2:1116629/150‑1 (MQ=255)
                                                                                                    cAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTg                                                       >  1:2093497/1‑144 (MQ=255)
                                                                                                    cAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTg                                                       <  2:2093497/144‑1 (MQ=255)
                                                                                                     aGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGTCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACa                                                                                                   <  1:381007/99‑1 (MQ=255)
                                                                                                     aGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGTCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACa                                                                                                   <  1:380574/99‑1 (MQ=255)
                                                                                                     aGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGTCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACa                                                                                                   >  2:381007/1‑99 (MQ=255)
                                                                                                     aGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGTCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACa                                                                                                   >  2:380574/1‑99 (MQ=255)
                                                                                                      gAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTGGACATGGc                                               >  2:1270035/1‑150 (MQ=255)
                                                                                                      gAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTGGACATGGc                                               <  1:2294086/150‑1 (MQ=255)
                                                                                                      gAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTGGACATGGc                                               <  2:2111248/150‑1 (MQ=255)
                                                                                                          gCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTGGACATGGCcgac                                           <  1:1270035/150‑1 (MQ=255)
                                                                                                            aTCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTGGACATGGCcgacga                                         >  1:1610563/1‑150 (MQ=255)
                                                                                                                 tGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTGGACATGGCCGACGAAGTGa                                    <  1:1910246/150‑1 (MQ=255)
                                                                                                                    aaGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTGGACATGGCCGACGAAGTGACCg                                 >  1:1076519/1‑150 (MQ=255)
                                                                                                                       gCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGt                                                                                                              >  2:232300/1‑70 (MQ=255)
                                                                                                                       gCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGt                                                                                                              <  1:232300/70‑1 (MQ=255)
                                                                                                                       gCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTGGACATGGCCGACGAAGTGACCGAGc                              <  2:856925/150‑1 (MQ=255)
                                                                                                                         cAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTGGACATGGCCGACGAAGTGACCGAGCaa                            >  2:412439/1‑150 (MQ=255)
                                                                                                                              cGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTGGACATGGCCGACGAAGTGACCGAGCAAATGcc                       >  2:496068/1‑150 (MQ=255)
                                                                                                                                 cGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAAGATGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTGGACATGGCCGACGAAGTGACCGAGCAAATGCCCcg                    >  1:1453762/1‑150 (MQ=255)
                                                                                                                                  gCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTGGACATGGCCGACGAAGTGACCGAGCAAATGCCCcgc                   <  1:1962550/150‑1 (MQ=255)
                                                                                                                                    ccAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTGGACATGGCcga                                            >  1:1946454/1‑123 (MQ=255)
                                                                                                                                    ccAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTGGACATGGCcga                                            <  2:1946454/123‑1 (MQ=255)
                                                                                                                                     cAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTGGACATg                                                 <  1:2030433/117‑1 (MQ=255)
                                                                                                                                     cAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTGGACATg                                                 >  2:2030433/1‑117 (MQ=255)
                                                                                                                                        tACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTGGACATGGCCGACGAAGTGACCGAGCAAATGCCCCGCGACGaa             <  2:344977/150‑1 (MQ=255)
                                                                                                                                                 ggTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTGGACATGGCCGACGAAGTGACCGAGCAAATGCCCCGCGACGAACTGGAGCAt    <  1:2022473/150‑1 (MQ=255)
                                                                                                                                                   tGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTGGACATGGCCGACGAAGTGACCGAGCAAATGCCCCGCGACGAACTGGAGCATGc  >  1:1486524/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
GCAGACGGCGACTGCGGGGGATGCCCAGGCGCAATTCGAACTGGGCGAGTATTACTACACGCAAACGCCAAAAAACCTGGGCAAAGCCCTGGACTGGTTCCAGAAGGCATCGCTGCAAGGCCAAGCCGACGCCCAATACCGTCTGGGTGCCATGTTCTTCCATGGCGAAGGGGTCAAGGCCAACAACGTGCAGGCCTACATCCTGCTGAAAATGGCTGCGGTCAATGGCGCCGAAGATGCGCTGGACATGGCCGACGAAGTGACCGAGCAAATGCCCCGCGACGAACTGGAGCATGC  >  NC_002947/5448233‑5448529

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑