| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,552,963 | C→A | 5.4% | intergenic (+578/+83) | PP_4882 → / ← PP_5717 | iron ABC transporter permease/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,552,963 | 0 | C | A | 5.4% | 223.1 / 2.2 | 74 | intergenic (+578/+83) | PP_4882/PP_5717 | iron ABC transporter permease/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (34/36); new base A (2/2); total (36/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.40e-01 | |||||||||||
TCATTTTCGCGCTCTCATAAGTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATCCAAAGAAAAAAAAGAACAATCAGTGCAATCAGCAAAATTTGT > NC_002947/5552820‑5553106 | tCATTTTCGCGCTCTCATAAGTCACTTCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAg > 2:1049352/1‑150 (MQ=255)tCATTTTCGCGCTCTCATAAGTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAg > 1:1444794/1‑150 (MQ=255) aTTTTCGCGCTCTCATAAGTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGcc > 2:2156737/1‑150 (MQ=255) ttttCGCGCTCTCATAAGTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAGCCAGAATGCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGccc < 1:2156737/150‑1 (MQ=255) tttCGCGGTCTCAGAAGGGACGGCGCATCAGTTGGTACGGCGGGGGTACAGGCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCg < 2:632583/150‑1 (MQ=17) ctctCATAAGTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGACTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTg > 2:1064362/1‑150 (MQ=255) ctcATAAGTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTggg < 1:1995899/150‑1 (MQ=255) tcATAAGTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTggg > 2:152116/1‑149 (MQ=255) tcATAAGTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTggg < 1:152116/149‑1 (MQ=255) aCTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTg < 2:1671575/138‑1 (MQ=255) aCTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTg > 1:1671575/1‑138 (MQ=255) aCTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCtg > 1:1488034/1‑150 (MQ=255) aCTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCtg > 1:929781/1‑150 (MQ=255) cgatctaGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCtggcgg < 1:2334613/144‑1 (MQ=255) aTCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGgctg > 2:1270399/1‑150 (MQ=255) gTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTg > 1:1946218/1‑150 (MQ=255) gTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGGTTCAGCTGGTTGCAGATTg > 2:2334613/1‑150 (MQ=255) ttGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGATCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGa < 2:394064/150‑1 (MQ=255) ttGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGa > 1:2219054/1‑150 (MQ=255) ggTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATGCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAgt < 1:1049352/150‑1 (MQ=255) gTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAgtg > 1:1722804/1‑150 (MQ=255) cGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGttt < 2:1444794/150‑1 (MQ=255) tCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAg < 2:2217060/150‑1 (MQ=255) tCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAg > 2:1889292/1‑150 (MQ=255) gtgtACAGCCGGTTCACCAAGAAGCCGAGGGATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGaaaa > 1:1231384/1‑150 (MQ=18) gtgtACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGaaaa > 1:1553941/1‑150 (MQ=255) tgtACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTc > 1:2061951/1‑96 (MQ=255) tgtACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTc < 2:2061951/96‑1 (MQ=255) gCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATggg > 2:740717/1‑150 (MQ=255) ggTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTg < 1:740717/150‑1 (MQ=255) gTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCGAAGCAAAGCCCg < 1:425828/96‑1 (MQ=17) gTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCGAAGCAAAGCCCg > 2:425828/1‑96 (MQ=17) ccAAGAAGCAGGCTTATGCTGAACAAGGGCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCt > 1:1481977/1‑150 (MQ=255) aagaagCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGcc > 1:858080/1‑87 (MQ=255) aagaagCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGcc < 2:858080/87‑1 (MQ=255) aagaagCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGt < 1:1270399/150‑1 (MQ=255) gaagCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGttt < 2:1722804/150‑1 (MQ=255) gCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTc < 2:1997030/74‑1 (MQ=255) gCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTc > 1:1997030/1‑74 (MQ=255) gCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACGGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTACAAAACAACGGGTTGCATTCTGGTTGAc > 2:1920662/1‑150 (MQ=255) gCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAgg < 1:1261403/150‑1 (MQ=255) aTGCTGAACAAGGACTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCtt < 1:1064362/150‑1 (MQ=255) gCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTAc < 2:1488034/150‑1 (MQ=255) gCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTAc < 2:929781/150‑1 (MQ=255) tGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGttt > 2:955692/1‑135 (MQ=255) tGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGttt < 1:955692/135‑1 (MQ=255) tGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGt > 2:32848/1‑133 (MQ=255) tGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGt < 1:32848/133‑1 (MQ=255) aCAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCaa < 2:1481977/150‑1 (MQ=255) aCAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCaa < 1:1920662/150‑1 (MQ=255) ttGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTGCGAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTa > 1:1894593/1‑150 (MQ=255) ttGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTActc < 1:2025304/148‑1 (MQ=255) ttGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTActc > 2:2025304/1‑148 (MQ=255) ttGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTCGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTa < 1:1889292/150‑1 (MQ=255) gAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATg > 2:1774154/1‑104 (MQ=255) gAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATg < 1:1774154/104‑1 (MQ=255) tCCGAACCAGAAGCCAAGACCGGCAGGTACGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCtt < 2:1148569/81‑1 (MQ=255) tCCGAACCAGAAGCCAAGACCGGCAGGTACGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCtt > 1:1148569/1‑81 (MQ=255) ccAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATCCAAAGaaaaaaaa < 2:2120122/150‑1 (MQ=255) gAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTa > 2:909328/1‑127 (MQ=255) gAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTa < 1:909328/127‑1 (MQ=255) cAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGgctgc > 1:1541200/1‑65 (MQ=255) cAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGgctgc < 2:1541200/65‑1 (MQ=255) cAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATCCAAAGAAAAAAAAGAACAATc > 1:281392/1‑150 (MQ=255) aaGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATc > 2:1020573/1‑128 (MQ=255) aaGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATc < 1:1020573/128‑1 (MQ=255) aaGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATCAAAAGAAAAAAAAGAACAATCa > 1:1204985/1‑150 (MQ=255) gACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATCCAAAGAAAAAAAAGAACAATCAGt > 2:288891/1‑150 (MQ=255) tggTCCGGGCTTTGCCTCGCAAAGCCCGGAAACTGGCGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCGTTCTGTTTGACAAGAGTTTACCTCCAGTACTCTATCCAAAGAAAAAAAAGAACAATCAGTGCAATCa < 1:1633559/149‑1 (MQ=25) ggTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATCCAAAGAAAAAAAAGAACAATCAGTGCAATCAg < 1:288891/150‑1 (MQ=255) tCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATcc > 2:2151219/1‑117 (MQ=255) tCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATcc < 1:2151219/117‑1 (MQ=255) cGGGCTTTGCGAAGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATCCAAAGAAAAAAAAGAACAATCAGTGCAAt > 2:281828/1‑143 (MQ=255) cGGGCTTTGCGAAGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATCCAAAGAAAAAAAAGAACAATCAGTGCAAt < 1:281828/143‑1 (MQ=255) gCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTa > 2:1522045/1‑95 (MQ=255) gCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTa < 1:1522045/95‑1 (MQ=255) cTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATCCAAAGAAAAAAAAGAACAATCAGTGCAATCAGCAAAAttt < 2:281392/150‑1 (MQ=255) ttGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATCCAAAGAAAAAAAAGAACAATCAGTGCAATCAGCAAAATTTGt < 2:2219054/150‑1 (MQ=255) | TCATTTTCGCGCTCTCATAAGTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTGTTTAGAAAACAATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATCCAAAGAAAAAAAAGAACAATCAGTGCAATCAGCAAAATTTGT > NC_002947/5552820‑5553106 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |