| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,772,213 | A→C | 5.8% | I269S (ATC→AGC) | betT‑I ← | choline transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,772,213 | 0 | A | C | 5.8% | 251.6 / 5.8 | 86 | I269S (ATC→AGC) | betT‑I | choline transporter |
| Reads supporting (aligned to +/- strand): ref base A (40/41); new base C (2/3); total (42/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
GCCGGCTTCGCCTTCATACACATAGAGGTCGAAGGTTTTCAGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTGTGGTCCATGCCGAACAGGTATTCCAGGCCGGACGATACTTGC > NC_002947/5772065‑5772362 | gCCGGCTTCGCCTTCATACACATAGAGGTCGAAGGTTTTCAGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCatgat > 1:2124108/1‑150 (MQ=255)gCCGGCTTCGCCTTCATACACATAGAGGTCGAAGGTTTTCAGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCatgat < 2:213728/150‑1 (MQ=255)gCCGGCTTCGCCTTCATACACATAGAGGTCGAAGGTTTTCAGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCatgat > 1:1634067/1‑150 (MQ=255) ggCTTCGCCTTCATACACATAGAGGTCGAAGGTTTTCAGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGtt > 2:1293161/1‑150 (MQ=255) cTTCGCCTTCATACACATAG‑GGTCGAAGGTTTTCAGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAg < 2:117471/150‑1 (MQ=255) ttCGCCTTCATACACATAGAGGTCGAAGGTTTTCAGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAg < 1:1293161/150‑1 (MQ=255) tCGCCTTCATACACATAGAGGTCGAAGGTTTTCAGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACATCATGCTGTTCAgt < 1:2172892/150‑2 (MQ=255) gacTTCAGACACTTAGAGGTCGAAGGTTTTCAGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGtt > 2:1744939/3‑150 (MQ=255) acaTAGAGGTCGAAGGTTTTCAGCACGATGCAGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGGAGGCAGGCCTT‑TATGCACACTAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAggcgg > 1:756191/1‑150 (MQ=255) aTAGAGGTCGAAGGTTTTCAGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGgcggcg > 1:1704210/1‑150 (MQ=255) tAGAGGTCGAAGGTTTTCAGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAggcgttgg < 2:1896314/150‑5 (MQ=255) ggTCGAAGGTTTTCAGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGc < 2:1339150/150‑1 (MQ=255) tCGAAGGTTTTCAGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAg > 1:547755/1‑137 (MQ=255) tCGAAGGTTTTCAGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAg < 2:547755/137‑1 (MQ=255) tCGAAGGTTTTCAGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATg > 1:943010/1‑147 (MQ=255) tCGAAGGTTTTCAGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATg < 2:943010/147‑1 (MQ=255) gAAGGTTTTCAGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGgcggcg < 1:467090/141‑1 (MQ=255) gAAGGTTTTCAGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGgcggcg > 2:467090/1‑141 (MQ=255) ggTTTTCAGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTtctc < 1:925315/150‑1 (MQ=255) ttttCAGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGACGGCGGATGCCGTTCTCCa > 1:239348/1‑150 (MQ=255) ttttCAGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGCTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACATCATGCTGTTCAg < 2:2123988/121‑1 (MQ=255) ttttCAGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGCTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACATCATGCTGTTCAg > 1:2123988/1‑121 (MQ=255) aGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACATCATGCTGTTCAgt < 2:574017/117‑2 (MQ=255) aGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACATCATGCTGTTCAgt > 1:574017/1‑116 (MQ=255) gCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCg < 1:1152633/150‑1 (MQ=255) catcaTGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCatgatg < 1:136464/105‑1 (MQ=255) catcaTGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCatgatg > 2:136464/5‑109 (MQ=255) cACGATGCTGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGa > 2:1810175/1‑150 (MQ=255) cGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATa < 2:1704210/150‑1 (MQ=255) tGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCg > 2:1534482/1‑150 (MQ=255) cGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTg < 1:1744939/150‑1 (MQ=255) gTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGc > 2:2220123/1‑137 (MQ=255) gTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGc < 1:2220123/137‑1 (MQ=255) gTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGc > 1:868235/1‑150 (MQ=255) gTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGc > 1:550089/1‑150 (MQ=255) ggTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGACCAGCATGATGTTCAGGTCGGACCGGCGGCGGATGCCCTCCTCCACGCCCGATACCGCTGCCACgg < 2:1893989/150‑1 (MQ=255) ggTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACgg < 1:1129911/150‑1 (MQ=255) ggTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACgg > 2:1611455/1‑150 (MQ=255) gTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGt < 2:586217/150‑1 (MQ=255) tAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTa < 1:1200517/150‑1 (MQ=255) aGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAg < 2:179774/150‑1 (MQ=255) gCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCAc > 2:905535/1‑150 (MQ=255) gCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCAc < 2:868235/150‑1 (MQ=255) ccAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACg > 1:1298126/1‑150 (MQ=255) cAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGc < 2:2124108/150‑1 (MQ=255) ttCTGCACGAAGCCGTTGATCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGAc < 1:155323/93‑1 (MQ=255) ttCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGAc > 2:155323/1‑93 (MQ=255) aCGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGAcc > 2:1600343/1‑150 (MQ=255) cGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCATGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATCCCGCCGCCACGGTAGCCACCCCCGCCATGACCa < 2:1993433/150‑1 (MQ=255) gAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCAACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAg > 1:1628326/1‑150 (MQ=255) aaGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCACGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAgg > 1:725382/1‑150 (MQ=255) ccGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATc < 1:1534482/150‑1 (MQ=255) cGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAgg > 2:1811941/1‑74 (MQ=255) cGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAgg < 1:1811941/74‑1 (MQ=255) ttGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATcacc < 1:1417477/150‑1 (MQ=255) aGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCaccacc > 2:561667/1‑150 (MQ=255) gCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCAccacca < 1:1810175/150‑1 (MQ=255) gCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGt > 2:1754464/1‑150 (MQ=255) gggTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATc > 2:1865315/1‑134 (MQ=255) gggTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATc < 1:1865315/134‑1 (MQ=255) ggTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGt > 2:1020597/1‑150 (MQ=255) gccgccCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCt > 1:954091/1‑150 (MQ=255) cccAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTGTgg < 2:725382/150‑1 (MQ=255) ccAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTGTGGt < 2:954091/150‑1 (MQ=255) cagcagCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTGTGGTc < 2:1634067/150‑1 (MQ=255) agcagcACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTGTGGTcc < 1:1263121/150‑1 (MQ=255) caCGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTGTGGTCCATGcc > 1:1962679/1‑150 (MQ=255) aCGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGAc > 2:1005218/1‑107 (MQ=255) aCGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGAc < 1:1005218/107‑1 (MQ=255) cGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTtct < 2:755812/63‑1 (MQ=255) cGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTtct > 1:755812/1‑63 (MQ=255) gAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTGTgg > 2:282128/1‑139 (MQ=255) gAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTGTgg < 1:282128/139‑1 (MQ=255) gAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTGTGGTCCATGCCGaa < 2:756191/150‑1 (MQ=255) gAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTGTGCTCCATGCCGaa > 2:1117510/1‑150 (MQ=255) gAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGATGTCGTGCGTGCCGac > 2:2248509/1‑149 (MQ=255) aaGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTCTGGTCCATGCCGAAc > 2:1631299/1‑150 (MQ=255) tCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATa > 1:1311822/1‑69 (MQ=255) tCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATa < 2:1311822/69‑1 (MQ=255) aaCAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTGTGGTCCATGCCGAACAGGTAt > 1:205806/1‑150 (MQ=255) aCAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTGTGGTCCATGCCGAACAGGTAtt < 1:1754464/150‑1 (MQ=255) aGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTGTGGTCCATGCCGAACAGGTATTcc > 2:1915650/1‑150 (MQ=255) ggCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTGTGGTCCATGCCGAACAGGTATTCCa < 1:80016/150‑1 (MQ=255) gCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGt < 2:1209914/75‑1 (MQ=255) gCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGt > 1:1209914/1‑75 (MQ=255) gCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTGTGGTCCATGCCGAACAGGTATTCCAg < 2:205806/150‑1 (MQ=255) aCTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTGTGGTCCATGCCGAACAGGTATTcgagatc > 1:1662890/1‑144 (MQ=255) tGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTGTGGTCCATGCCGAACAGGTATTCCAGGCCgg > 1:238862/1‑150 (MQ=255) tGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTGTGGTCCATGCCGAACAGGTATTCCAGGCCgg > 1:1350050/1‑150 (MQ=255) gAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTGTGGTCCATGCCGAACAGGTATTCCAGGCCGGa < 1:1611455/150‑1 (MQ=255) aaCAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTGTGGTCCATGCCGAACAGGTATTCCAGGCCGGAc < 1:905535/150‑1 (MQ=255) tgatgTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTGTGGTCCATGCCGAACAGGTATTCCAGGCCGGACGATACtt < 1:309169/150‑1 (MQ=255) atgTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTGTGGTCCATGCCGAACAGGTATTCCAGGCCGGACGATACTTGc > 2:797127/1‑150 (MQ=255) | GCCGGCTTCGCCTTCATACACATAGAGGTCGAAGGTTTTCAGCACGATGCCGTTCAGGTAGTCGCCAACGTTCTGCACGAAGCCGTTGAGCAGG‑TGCAGGGTTTCGCCGCCCAGCAGCACGAAGATCAACAGGCCACTGAACAGCATGATGTTCAGGTTGGACAGGCGGCGGATGCCGTTCTCCACGCCCGATACCGCTGCCACGGTAGCCACGCCGGCCATGACCAGGATCACCACCAGCAGGTTGGTCTTGCTGTGGTCCATGCCGAACAGGTATTCCAGGCCGGACGATACTTGC > NC_002947/5772065‑5772362 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |