| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,824,771 | C→A | 5.6% | intergenic (+139/+35) | PP_5102 → / ← trmB | hypothetical protein/tRNA (guanosine(46)‑N7)‑methyltransferase TrmB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,824,771 | 0 | C | A | 5.6% | 344.4 / 2.4 | 113 | intergenic (+139/+35) | PP_5102/trmB | hypothetical protein/tRNA (guanosine(46)‑N7)‑methyltransferase TrmB |
| Reads supporting (aligned to +/- strand): ref base C (51/54); new base A (4/3); total (55/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 116 total aligned reads displayed.
GCCGCGGCTGAGCGAATGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCGGCACATAGGTGCCGTCTGCC > NC_002947/5824622‑5824920 | gccgcGGCTGAGCGAATGACCCCTTGTAGGAGCGGATGCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTc > 1:1352566/1‑150 (MQ=255) ccgcGGCTGAGCGAATGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCa > 1:2292983/1‑150 (MQ=255) cTGAGCGAATGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCgg < 1:2282270/150‑1 (MQ=255) cTGAGCGAATGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCgg > 1:1200323/1‑150 (MQ=255) gaccGAATGACCCCTCGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAATGAAACAACCGCCCTGAAAAGGGCGGtt < 1:266117/147‑1 (MQ=18) gAGCGAATGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGtt > 1:218411/1‑150 (MQ=255) gAGCGAATGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGtt < 1:714728/150‑1 (MQ=255) gAGCGAAGGCCCCCTCGTGGGAGCGGAGTCAACGGCGAAAGGGCCGGCCCGCCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAACCCCGCTCTTACAAAGAAAAAACCGCCCTTTTCAGGGCGGtt < 1:1147241/150‑1 (MQ=21) gCGAATGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGtttt > 1:2206482/1‑150 (MQ=255) gCGAATGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGtttt > 1:2046494/1‑150 (MQ=255) cGAATGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGTGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTa < 1:1920599/150‑1 (MQ=255) cGAATGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTa < 1:188437/150‑1 (MQ=255) gatccaCCCCTTGTAGGAGCGGAGCAACCCGCACAAGGTGCGGCCCTGCTCGCCAATCTCCACCCCCCCCTCACCGTGGTCGCCGCTACCATAT‑TCGCGGTTAAACCCGCTCCTACAAAGAAAAAACCGCCCTGAAAAGGGCGGtttttt < 1:1873767/145‑3 (MQ=255) aaTGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTAcc > 1:1189919/1‑150 (MQ=255) aCCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGaaa > 2:575181/1‑150 (MQ=255) ccTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGaaaa < 2:1648956/148‑1 (MQ=255) ccTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGaaaa > 1:1648956/1‑148 (MQ=255) ccTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAgg < 1:981486/150‑1 (MQ=255) ccTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAgg < 2:2206482/150‑1 (MQ=255) ttGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGT‑GGCCCAACCCGCTCATGGCTCTTGTAAACCCGCACCAACAAAAAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGcc < 2:1834308/150‑1 (MQ=16) tAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTa < 2:1783398/150‑1 (MQ=255) ggAGCGGATTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATc > 1:353289/1‑150 (MQ=255) gCGGATTCATCCGCCAAAGGGCCGTCGCTGCGGGCCTATTTCCACCCGCTCTTCACCGTGGGCGCCGCTTCGGTAT‑TCGCGGGTAAACCCGCTTCTACAAAGAAAAAACCGCTCTTTTCATGGCGGTTTTACCGAAAAGGCCGTATCAGc < 2:181817/150‑1 (MQ=21) gCGGATTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGc < 2:1973425/150‑1 (MQ=255) gCGGATTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGc > 1:678021/1‑150 (MQ=255) aTTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCt > 2:1598610/1‑150 (MQ=255) cccGCAAAAGGGCCGGCCATCCTGCCCAATCTCCGCCCGCGCTTCACCGTGGGAGCCGCTACCGTAT‑TCGCGGGAAACACCGCGCCAACAAAGAAAAAACCGCCCTTTTCAGCGCGGTTTTACCGCTAAGGCCGTATCAGCCGCTCAATc < 2:371149/149‑1 (MQ=25) aCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTGAAAAGGGCGGttt < 1:1954824/120‑1 (MQ=18) aCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGGAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCGTTTAGGGGCGGGTTTACCGAAAAGGCCGTATCAGCCGCtgcatc > 1:251082/1‑145 (MQ=25) aCCGCGAAAGCGCCGCCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCCCTCCTACAAACAAAAACCCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATc < 1:1802924/150‑1 (MQ=25) ccGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATcc < 2:353289/150‑1 (MQ=255) gcgAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTAt > 1:1225694/1‑134 (MQ=255) gcgAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTAt < 2:1225694/134‑1 (MQ=255) aaaGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCtt > 1:1235055/1‑150 (MQ=255) gggCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTtctc < 2:1719060/150‑1 (MQ=255) ggccggccCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCg < 1:575181/150‑1 (MQ=255) ccggccCTGCTGGCCCATCTCCACCCGCCCTTATGCGGGGACTTCTTTATCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGaa < 1:1319740/150‑1 (MQ=37) gccCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACtt > 1:933047/1‑150 (MQ=255) gctgGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGt < 1:1510268/150‑1 (MQ=255) gctgGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGt < 2:2175739/150‑1 (MQ=255) tgGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCGCGAACTTCAGGTcc > 2:605977/1‑150 (MQ=255) ggCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCGCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCCATCCACCTTCTCGAACTTCAAGTccc > 1:1543178/1‑150 (MQ=255) cAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCcaca > 1:374398/1‑150 (MQ=255) cAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCcaca > 1:676328/1‑150 (MQ=255) cAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCcaca > 2:1175332/1‑150 (MQ=255) cAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTGTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCcaca > 1:187258/1‑150 (MQ=255) tctcCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACAccc > 1:2012630/1‑150 (MQ=255) ccACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGt > 2:2177132/1‑150 (MQ=255) cACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTg < 2:933047/150‑1 (MQ=255) aCCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGc < 2:2292983/150‑1 (MQ=255) ccGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTCTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGccc < 1:1759151/150‑1 (MQ=255) cGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGcccc > 1:801321/1‑150 (MQ=255) gCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCaa < 1:1169988/110‑1 (MQ=255) gCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCCCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCaa > 2:1169988/1‑110 (MQ=255) cctccccACCGCGGGCGCCCCCACCGTAT‑TGGCGGGTACACCCGCTCCTACAAAGAAAAAACCGCCCTGTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCGCCATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCa < 2:1450228/144‑1 (MQ=255) ccTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGc < 1:1545298/150‑1 (MQ=255) cGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGc < 2:1964983/85‑1 (MQ=255) cGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGc > 1:1964983/1‑85 (MQ=255) gggCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCGTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTCCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACcgc < 2:676328/150‑1 (MQ=255) cgcTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGtt < 1:2258701/150‑1 (MQ=255) tACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGa > 1:1364695/1‑150 (MQ=255) aCCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCgcggc > 2:587904/1‑143 (MQ=255) aCCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCgcggc < 1:587904/143‑1 (MQ=255) ccGTAT‑TCCCGTGTAAACGCGTTCCTACAACGAAAAACCCGCCCTTTTCAGGGCGGTTTTACCTAAATGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCATGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAAc < 2:343886/150‑1 (MQ=255) aT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCAc < 1:125037/88‑1 (MQ=255) aT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCAc > 2:125037/1‑88 (MQ=255) aT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTgg < 2:801321/150‑1 (MQ=255) gcgGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAGCTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGAt > 1:616010/1‑150 (MQ=255) gcgGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGAt > 2:635746/1‑150 (MQ=255) gcgGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGAt > 1:1523273/1‑150 (MQ=255) ggTAACCCCGCTCTTACAAAGAAAACATCTCCCTTTTCAGGGCGGCTTTACCGAAAAGGCCGTATCAGCCGCGCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCTAACTTGGTGATCgg < 2:280535/150‑1 (MQ=255) ggTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCTTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCgg < 1:917295/150‑1 (MQ=255) cccGCTCCTACAAAGAAAAACACGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTg < 1:712191/136‑1 (MQ=255) cccGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTg > 2:712191/1‑136 (MQ=255) cccGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGctc > 1:1639396/1‑150 (MQ=255) ccGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGcc > 1:314783/1‑106 (MQ=255) ccGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGcc < 2:314783/106‑1 (MQ=255) ccGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGctct > 1:1306439/1‑150 (MQ=255) ccGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGctct > 2:891070/1‑150 (MQ=255) cGCTCCTACAAAGAAACAACCGCCCTTTTTAGGTCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCAAGCAATTCCCCGCGGCGTTCGAACTTGGTGATCGGGCGCTCtt < 2:573429/150‑1 (MQ=255) tACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGgc > 1:2022534/1‑150 (MQ=255) aaaGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGcgcg > 1:2130751/1‑150 (MQ=255) aaaGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGcgcg > 2:1036766/1‑150 (MQ=255) aaGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCgg < 2:1523273/150‑1 (MQ=255) gtaaaaCCGCCCTGAAAAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCGGcac > 1:261447/3‑150 (MQ=255) aaaaCCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACTGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCGGCACAt > 2:1219361/1‑150 (MQ=255) aaaCCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCGGCACATa > 2:300087/1‑150 (MQ=255) aaCCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCGGCACATAg < 1:891070/150‑1 (MQ=255) ccGCCCTTTTCAGGGGCGTCTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACGTCAAGTCCCACACCCCGTGCCCCAGCCGCTCGCCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCGGCACATAGGt < 2:1543178/150‑1 (MQ=255) cGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGTCCCAGCCGCTCAcc < 2:885908/98‑1 (MQ=255) cGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGTCCCAGCCGCTCAcc > 1:885908/1‑98 (MQ=255) cGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCgg > 1:933942/1‑122 (MQ=255) cGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCgg < 2:933942/122‑1 (MQ=255) cccTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGACCTTGGTGATCGGGCGCTCGTCGGGGCGCGGCACATAGGTGcc > 1:1682756/1‑150 (MQ=255) cTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGc < 1:1785971/86‑1 (MQ=255) cTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGc > 2:1785971/1‑86 (MQ=255) ttttCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACATTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAAc < 1:167853/106‑1 (MQ=255) ttCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCGGCACATAGGTGCCGTCTg > 2:1702388/1‑150 (MQ=255) cAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCGGCACATAGGTGCCGTCTGcc < 2:2076479/150‑1 (MQ=255) cAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCGGCACATAGGTGCCGTCTGcc < 2:1189919/150‑1 (MQ=255) | GCCGCGGCTGAGCGAATGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTAT‑TCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCGGTTTTACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCGGCACATAGGTGCCGTCTGCC > NC_002947/5824622‑5824920 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |