| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,898,657 | G→A | 5.6% | P763S (CCT→TCT) | PP_5173 ← | RND family transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,898,657 | 0 | G | A | 5.6% | 254.9 / 2.2 | 84 | P763S (CCT→TCT) | PP_5173 | RND family transporter |
| Reads supporting (aligned to +/- strand): ref base G (38/41); new base A (2/3); total (40/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTGACCGAGGCCTTGATGGTGATGGTCGGCTTGCGGTCGCGGCGCCACACCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTACGATGCTGTTCATCACATTGGCAACATCTTCGGACGACAGCCCCAGCTGGCGTGCCTTGTCCT > NC_002947/5898509‑5898806 | ttGACCGAGGCCTTGATGGTGATGGTCGGCTTGCGGTCGCGGCGCCACACCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGt < 1:1426696/150‑1 (MQ=255) cGAGGCCTTGATGGTGATGGTCGGCTTGCGGTCGCGGCGCCGCACCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGcc < 1:1629144/150‑1 (MQ=255) cGAGGCCTTGATGGTGATGGTCGGCTTGCGGTCGCGGCGCCACACCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGcc > 2:1261137/1‑150 (MQ=255) tgatggtgatggTCGGCTTGCGGTCGCGGCGCCACACCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCAcgctcgc > 2:1347564/1‑150 (MQ=255) gatggtgatggtCGGCTTGCGGTCGCGGCGCCACACCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCAcgctcgct < 2:201556/150‑1 (MQ=255) gatggtgatggtCGGCTTGCGGTCGCGGCGCCACACCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCAcgctcgct < 2:1869401/150‑1 (MQ=255) gatggtgatggtCGGCTTGCGGTCGCGGCGCCACACCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGATGAGCCAcgctcgct > 1:637240/1‑150 (MQ=255) gatggtgatggtCGGCTTGCGGTCGCGGCGCCACACCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGATGAGCCAcgctcgct > 1:636787/1‑150 (MQ=255) tgatggtCGGCTTGCGGTCGCGGCGCCACACCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGTGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCAcgctc < 1:2175876/142‑1 (MQ=255) tgatggtCGGCTTGCGGTCGCGGCGCCACACCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCAcgctc > 2:2175876/1‑142 (MQ=255) gatggtCGGCTTGCGGTCGCGGCGCCACACCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTc > 1:1752910/1‑150 (MQ=255) gatggtCGGCTTGCGGTCGCGGCGCCACACCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTc < 1:94712/150‑1 (MQ=255) gtCGGCTTGCGGTCGCGGCGCCACACCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGgcg > 1:2029561/1‑150 (MQ=255) cGGCTTGCGGTCGCGGCGCCACACCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGcgcg < 2:1621562/150‑1 (MQ=255) cGGCTTGCGGTCGCGGCGCCACACCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGcgcg < 2:681234/150‑1 (MQ=255) ttGCGGTCGCGGCGCCACACCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCg > 2:1826361/1‑150 (MQ=255) gcggcgCCACACCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATc > 1:1475500/1‑150 (MQ=255) gcgcCACACCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGAc < 1:691550/150‑1 (MQ=255) cgcCACACCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGAcc < 2:1189733/150‑1 (MQ=255) ccACACCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAg > 1:1480550/1‑150 (MQ=255) ccACACCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAg > 1:1198990/1‑150 (MQ=255) acacCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGa > 1:1500612/1‑144 (MQ=255) acacCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGa < 2:1500612/144‑1 (MQ=255) cacCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTa < 1:460593/150‑1 (MQ=255) cTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGCCCAGGTAGATATTGTc < 2:1844656/150‑1 (MQ=255) cTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTc < 2:2029561/150‑1 (MQ=255) tCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGAc < 2:1227483/131‑1 (MQ=255) tCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGAc > 1:1227483/1‑131 (MQ=255) cAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGAc < 1:1261137/150‑1 (MQ=255) cAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGAc > 1:535037/1‑150 (MQ=255) aGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGAcc > 2:2268656/1‑150 (MQ=255) gTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTc < 1:1759010/106‑1 (MQ=255) gTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTc > 2:1759010/1‑106 (MQ=255) cGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGATGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTggg < 2:637240/150‑1 (MQ=255) cGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGATGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTggg < 2:636787/150‑1 (MQ=255) gTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGt < 2:1475500/150‑1 (MQ=255) gTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGt < 1:1347564/150‑1 (MQ=255) cgcACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATc < 1:685661/150‑1 (MQ=255) ggTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCAc > 2:1556778/1‑150 (MQ=255) cGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCAc < 2:535037/150‑1 (MQ=255) gAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGat > 2:2150191/1‑117 (MQ=255) gAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGat < 1:2150191/117‑1 (MQ=255) gAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCt > 2:1118743/1‑140 (MQ=255) gAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCt < 1:1118743/140‑1 (MQ=255) gAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACt > 2:957281/1‑150 (MQ=255) gAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGCGATCTGCACGCCACt > 2:431869/1‑150 (MQ=255) aCGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTggg < 1:89430/132‑1 (MQ=255) aCGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTggg > 2:89430/1‑132 (MQ=255) aCGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTa > 2:137700/1‑150 (MQ=255) cGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTAc > 2:557807/1‑150 (MQ=255) agcagcGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTggg < 2:209352/127‑1 (MQ=255) agcagcGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTggg > 1:209352/1‑127 (MQ=255) agcagcGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTACGATg > 1:2184816/1‑150 (MQ=255) ggATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGcgcg > 1:1651562/1‑79 (MQ=255) ggATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGcgcg < 2:1651562/79‑1 (MQ=255) aTCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTACGATGCTGTtcatc < 1:137700/150‑1 (MQ=255) gACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACt > 2:710121/1‑131 (MQ=255) gACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACt < 1:710121/131‑1 (MQ=255) aCGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTACGATGCTGTTCATCACAt > 1:1822321/1‑150 (MQ=255) gTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGGGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCCGCAAGCCACTTCCGCTGCTGTTCATCCTATTg < 2:1257596/150‑1 (MQ=255) tGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTACGATGCTGTTCATCACATTgg < 1:1556778/150‑1 (MQ=255) tGCCGTTAGGGGTAAGAATTTGCAGGTCCTGAAGAGAATAACAGCCGGTGGGCGCGCTCGCTTCGGCGCGGATCATGACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTACGATGCTGTTCATCACATTgg < 1:1685886/150‑1 (MQ=255) gCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTACGATGCTGTTCATCACATTGGc < 1:1505822/150‑1 (MQ=255) cGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTACGATGCTGTTCATCACATTGGCaa < 1:957281/150‑1 (MQ=255) gTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTACGATGCTGTTCATCACATTGGCAAc > 1:1890178/1‑150 (MQ=255) ggggTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTACGATGCTGTTCATCACATTGGCa < 1:2241437/144‑1 (MQ=255) ggggTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTACGATGCTGTTCATCACATTGGCa > 2:2241437/1‑144 (MQ=255) ggTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTACGATGCTGTTCATCACATTGGCAACATCTTc < 1:1826361/150‑1 (MQ=255) gTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTACGATGCTGTtcatca < 2:1336989/133‑1 (MQ=255) gTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTACGATGCTGTtcatca > 1:1336989/1‑133 (MQ=255) gTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTACGATGCTGTTCATCACATTGGCAACATCTTCg > 1:718904/1‑150 (MQ=255) tGCAGCGTATCAGGTGAGACACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAg > 1:941228/1‑63 (MQ=255) tGCAGCGTATCAGGTGAGACACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAg < 2:941228/63‑1 (MQ=255) gCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTACGATGCTGTTCATCACATTGGCAACATCTTCGGACGACAGCCCCAGCTGGc > 2:1693704/1‑150 (MQ=255) cAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTACGATGCTGTtcat < 2:1303847/111‑1 (MQ=255) cAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTACGATGCTGTtcat > 1:1303847/1‑111 (MQ=255) gCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGc > 1:498570/1‑90 (MQ=255) gCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGc < 2:498570/90‑1 (MQ=255) cGTATCAGGTGAGCCAGGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGCCCTGGGTGATCTGCACGCCACTTACGATGCTGTCCATCACATTGGCAACATCTTCGGACGACAGCCCCAGCTGGCGTGc < 2:334950/150‑1 (MQ=255) cGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCa < 2:1087610/91‑1 (MQ=255) cGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCa > 1:1087610/1‑91 (MQ=255) tATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTACGATGCTGTTCATCACATTGGCAACATCTTCGGACGACAGCCCCAGCTGGCGTGCCt > 2:1637969/1‑150 (MQ=255) aGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTACGATGCTGt > 1:1181407/1‑98 (MQ=255) aGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTACGATGCTGt < 2:1181407/98‑1 (MQ=255) ggTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTTACCTGGGTGATCTGCACGCCACTTACGATGCTGTTCATCACATTGGCAACATCTTCGGACGACAGCCCCAGCTGGCGTGCCTTGTcc > 1:1178764/1‑150 (MQ=255) gTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTACGATGCTGTTCATCACATTGGCAACATCTTCGGACGACAGCCCCAGCTGGCGTGCCTTGTCCt < 2:1198990/150‑1 (MQ=255) | TTGACCGAGGCCTTGATGGTGATGGTCGGCTTGCGGTCGCGGCGCCACACCAGCGGCTGTTCCAGTTCGTAGCGCACGGTGGCGAACGACAGCAGCGGGATCGACGTGCCGTTAGGGGTAAGAATTTGCAGGTTCTGCAGCGTATCAGGTGAGCCACGCTCGCTGTCTTCGGCGCGGGCGACCACATCGACCAGGTAGATATTGTCGTTGACCTGGGTGATCTGCACGCCACTTACGATGCTGTTCATCACATTGGCAACATCTTCGGACGACAGCCCCAGCTGGCGTGCCTTGTCCT > NC_002947/5898509‑5898806 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |