| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,948,739 | T→A | 16.7% | intergenic (‑64/+18) | PP_mr62 ← / ← trxA | Pseudomon‑Rho regulatory region/thioredoxin I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,948,739 | 0 | T | A | 16.7% | 202.6 / 32.7 | 78 | intergenic (‑64/+18) | PP_mr62/trxA | Pseudomon‑Rho regulatory region/thioredoxin I |
| Reads supporting (aligned to +/- strand): ref base T (31/34); new base A (7/6); total (38/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01 | |||||||||||
CCGCTGGATGGCGACAGGATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCGTGCTTGGCCGG > NC_002947/5948591‑5948882 | ccgcTGGATGGCGACAGGATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCAttt < 1:726274/150‑1 (MQ=255) cTGGATGGCGACAGGATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCg < 1:561162/150‑1 (MQ=255) gACAGGATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTAAAAAAGAAAA‑GCCCCGCATTTGCGGGGCGtttt > 1:370915/1‑150 (MQ=255) aGGATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAAGGCCCCGCAAATGCGGGGCttttctt < 1:1986827/150‑4 (MQ=255) aGGATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTtcac > 1:1662461/1‑150 (MQ=255) gATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTtcacat < 1:2171910/150‑1 (MQ=255) tCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCgg < 2:115018/135‑1 (MQ=255) tCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCgg > 1:115018/1‑135 (MQ=255) cgcgTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAAGGCCCCGCAAATGCGGGG‑CTTTtctttttca < 2:1853809/150‑8 (MQ=38) cgcgTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTtcacatcac < 1:1294638/150‑1 (MQ=255) gcgTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTtcacatcaca < 1:1981075/150‑1 (MQ=255) cgTACTGATTCGAATTATGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAg < 1:90739/150‑1 (MQ=255) tACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGt < 1:1304179/150‑1 (MQ=255) aCTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCAAATGCGGGGc < 1:1605286/132‑1 (MQ=255) aCTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCAAATGCGGGGc > 2:1605286/1‑132 (MQ=255) cTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTgg < 1:622643/150‑1 (MQ=255) cTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTgg < 1:1404714/150‑1 (MQ=255) tGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTgg < 1:1904845/149‑1 (MQ=255) tGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTgg > 2:1904845/1‑149 (MQ=255) gATTCGAATAAGGGAGGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAACAAGTGACTGGAGTTCAGACGTGTGTTCTTCTTTCTGCGGCTAGTGATCTCACATAGAAAA‑GTCGCTTTTTGGCGGTGCCTTTTCACATCACAGGTGGGc < 1:1695123/150‑1 (MQ=255) aTTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGAATTTTAACCTAAAAGGTGTGCg > 2:723787/1‑150 (MQ=255) gAATTAGGGATGCTTCGGCGACGGCATGTAGGGGGGACTGGAAAAGCAGTGCGAGGCCGGATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGa > 1:1747148/1‑150 (MQ=255) gAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGACCTTATCACATCTCAGGGTGGCGTCgg < 2:859884/150‑2 (MQ=255) aTTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAAGGCCCCGCAAATGCGGGGc > 2:1921198/1‑123 (MQ=255) aTTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAAGGCCCCGCAAATGCGGGGc < 1:1921198/123‑1 (MQ=255) ttAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGa > 1:1912163/1‑150 (MQ=255) gggATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATg > 1:11349/1‑150 (MQ=255) cTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCa > 1:1435939/1‑150 (MQ=255) ttCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAAGGCCCCGCAAATGCGGGGCttttcttt < 2:97245/120‑5 (MQ=38) ttCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAAGGCCCCGCAAATGCGGGG‑CTTTtcttt > 1:97245/1‑117 (MQ=38) cGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCt < 2:1043686/150‑1 (MQ=255) gACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAgg < 1:2049483/121‑1 (MQ=255) gACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAgg > 2:2049483/1‑121 (MQ=255) aTGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGa > 2:2159464/1‑150 (MQ=255) aTGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGa < 1:1607422/150‑1 (MQ=255) gTAGAGGGCACTGCAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACa < 1:231799/150‑1 (MQ=255) gagGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTg > 1:1648445/1‑150 (MQ=255) ggCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTgcgc < 1:2159464/150‑1 (MQ=255) tGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCt < 1:1725152/88‑1 (MQ=255) tGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCt > 2:1725152/1‑88 (MQ=255) aaaaGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTtg < 2:11349/150‑1 (MQ=255) aaaaGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTtg < 2:1912163/150‑1 (MQ=255) aaGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTtggt < 1:1376789/150‑1 (MQ=255) aaGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTAACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTtggt > 2:1202430/1‑150 (MQ=255) gCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCg > 1:16139/1‑150 (MQ=255) gAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGaa < 1:2000592/102‑1 (MQ=255) gAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGaa > 2:2000592/1‑102 (MQ=255) cGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTAACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGc < 1:1202430/150‑1 (MQ=255) gAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTtg < 1:1586700/133‑1 (MQ=255) gAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTtg > 2:1586700/1‑133 (MQ=255) tAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCt < 1:723787/150‑1 (MQ=255) aaCACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACa > 2:1276/1‑113 (MQ=255) aaCACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACa < 1:1276/113‑1 (MQ=255) acTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTg > 1:643768/1‑75 (MQ=255) acTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTg < 2:643768/75‑1 (MQ=255) acTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGac < 2:1747148/150‑2 (MQ=255) acTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGaa > 1:811469/1‑150 (MQ=255) ttttttCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACTTTTGTGGCTTCGACGTTGCCGTTCTTGAACAGCAt < 1:1032560/150‑1 (MQ=255) ttttttCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCAt > 2:168876/1‑150 (MQ=255) ttttttCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCAt > 2:1031394/1‑150 (MQ=255) tCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGa < 1:1031394/150‑1 (MQ=255) tAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATa > 2:2233427/1‑150 (MQ=255) gTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTgg > 2:1978101/1‑55 (MQ=255) gTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTgg < 1:1978101/55‑1 (MQ=255) tGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCa > 2:1443884/1‑150 (MQ=255) ctctGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACg > 1:1377789/1‑150 (MQ=255) tGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATAc > 1:1620776/1‑143 (MQ=255) tGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATAc < 2:1620776/143‑1 (MQ=255) gAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGAt > 1:334690/1‑140 (MQ=255) gAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGAt < 2:334690/140‑1 (MQ=255) tgtgaaaagGCCCCGCAAATGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCg > 2:1969397/4‑134 (MQ=255) tgtgaaaagGCCCCGCAAATGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCg < 1:1969397/131‑1 (MQ=255) aaagaaaa‑gCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCg > 1:810079/1‑150 (MQ=255) aaagaaaa‑gCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCg > 2:396913/1‑150 (MQ=255) aagaaaa‑gCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCATCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCGt < 1:840994/150‑1 (MQ=255) aaag‑gCCCCGCAAATGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCGTGCt > 1:939305/1‑150 (MQ=255) gCCCCGCAAATGCGGGGCTTTTTCACATCACAGGTGGGCGTCGAGGAATGAGGCCAGCTGCCATTTGGACAGTGCGCCAACCTTGGTGGCTCCTACGTGGCGAGTCTGGAACAGCATCAGCGTCGGGATACCACGCACACCGTGCTTGGc > 2:1432057/1‑150 (MQ=255) gCCCCGCAAATGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCGTGCTTGGc > 1:624607/1‑150 (MQ=255) ccGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCGTGCTTGGCCgg > 1:2272803/1‑150 (MQ=255) | CCGCTGGATGGCGACAGGATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCGTGCTTGGCCGG > NC_002947/5948591‑5948882 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |