| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 547,215 | C→T | 5.8% | A21V (GCG→GTG) | fusA → | elongation factor G 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 547,215 | 0 | C | T | 5.8% | 309.3 / 5.9 | 103 | A21V (GCG→GTG) | fusA | elongation factor G 1 |
| Reads supporting (aligned to +/- strand): ref base C (43/54); new base T (3/3); total (46/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.43e-01 | |||||||||||
Only 100 of 108 total aligned reads displayed.
TGAAGACGTTCACCGTATGGCTGAAGCCAACAAAGCGTTCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTGCAGGAGCAGGAGCGGGGTATCACCATTACCTCCGCTGCCGTTACCACC > NC_002947/547066‑547363 | tGAAGACGTTCACCGTATGGCTGAAGCCAACAAAGCGTTCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGAcgc > 2:1881214/1‑150 (MQ=255)tGAAGACGTTCACCGTATGGCTGAAGCCAACAAAGCGTTCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGAcgc < 2:786042/150‑1 (MQ=255) aaGACGTTCACCGTATGGCTGAAGCCAACAAAGCGTTCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCgg < 1:1305223/150‑1 (MQ=255) aGACGTTCACCGTATGGCTGAAGCCAACAAAGCGTTCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCggg < 1:971410/150‑1 (MQ=255) ggTTCGCCGTATGGCTGAAGGCAACAAAGCTGTCTCGCACTACCGCTTCTAAGTGAAGCATCAATCTTTTTGCTAGGGCTTTATGTCTCGTACTACAGCAATTAGCCGCTACCGTAACAGTGGTATCTGTGGCCACGTTGACGCGGGCaa < 2:224571/149‑1 (MQ=255) gTTCACCGTATGGCTGAAGCCAACAAAGCGTTCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAg < 2:64877/150‑1 (MQ=255) ccGTATGGCTGAAGCCAACAAAGCGTTCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGaccac < 1:351164/150‑1 (MQ=255) ccGTATGGCTGAAGCCAACAAAGCGTTCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGaccac < 2:24844/150‑1 (MQ=255) ccGTATGGCTGAAGCCAACAAAGCGTTCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTCGACGCGGGCAAGaccac < 2:677234/150‑1 (MQ=255) gCTGAAGCCAACAAAGCGTTCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTAcc < 2:739526/150‑1 (MQ=255) cTGAAGCCAACAAAGCGTTCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCGCGTCAACGTGGGCacagatac > 1:1669442/1‑135 (MQ=255) cTGAAGCCAACAAAGCGTTCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCGCGTCAACGTGGGCacagatac < 2:1669442/142‑8 (MQ=255) cTGAAGCCAACAAAGCGTTCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCg > 2:1795907/1‑150 (MQ=255) tGAAGCCAACAAAGCGTTCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGa > 2:760478/1‑150 (MQ=255) tGAAGCCAACAAAGCGTTCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGa > 2:170632/1‑150 (MQ=255) tGAAGCCAACAAAGCGTTCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGa > 1:270566/1‑150 (MQ=255) aaGCCAACAAAGCGTTCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGc < 2:270566/150‑1 (MQ=255) aaGCCAACAAAGCGTTCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGc < 1:803934/150‑1 (MQ=255) acaaAGCGTTCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATcc < 1:17802/150‑1 (MQ=255) aGCGTTCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGtt < 2:585274/150‑1 (MQ=255) cGTTCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCt < 1:1459091/150‑1 (MQ=255) gTTCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTa < 2:1016592/150‑1 (MQ=255) ttCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTac > 1:221262/1‑150 (MQ=255) tctcGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTaca < 2:1660949/150‑1 (MQ=255) ctcGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTacac > 2:932521/1‑150 (MQ=255) cGCACTACCGCTTCTAATTCAAGCACCAATCTTTTTGCGAGGGCTTTATGGCTTGTACTACAGCAATTAACCGCCTCCCTACCATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAg < 2:450125/150‑1 (MQ=39) cACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGt > 1:2108818/1‑150 (MQ=255) aCTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCATACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTc < 2:818035/150‑1 (MQ=255) cTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTAGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCca > 1:72593/1‑150 (MQ=255) ttCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCcac > 1:1176187/1‑150 (MQ=255) ttCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCgg < 2:1759585/94‑1 (MQ=255) ttCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCgg > 1:1759585/1‑94 (MQ=255) tCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATgg < 1:932521/150‑1 (MQ=255) cAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATggg < 1:50421/150‑1 (MQ=255) cAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATggg < 2:1991640/150‑1 (MQ=255) aaGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGc > 1:1343392/1‑150 (MQ=255) cATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCGCGTCAACGTGGGCaca < 2:1096117/93‑3 (MQ=255) cATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCGCGTCAACGTGGGCaca > 1:1096117/1‑91 (MQ=255) aTCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAgg < 2:1334534/150‑1 (MQ=255) aTCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAAACGCTAACGTAACATTAGTAGCCGGTCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAgg < 1:1795907/150‑1 (MQ=39) aaTCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGc > 1:1141624/1‑150 (MQ=255) tttttGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGa > 1:998887/1‑150 (MQ=255) ttttTCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGAc < 2:980513/150‑1 (MQ=255) tGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCTCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGgc < 1:800728/150‑1 (MQ=255) gAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGcgcc > 1:2025264/1‑150 (MQ=255) gAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGcgcc > 2:1803720/1‑150 (MQ=255) gAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGcgcc > 1:713775/1‑150 (MQ=255) gAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGcgcc > 1:1702445/1‑150 (MQ=255) tttATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGacc > 1:2081745/1‑150 (MQ=255) tttATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGacc > 2:1900972/1‑150 (MQ=255) tATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGaccac > 2:549638/1‑150 (MQ=255) cTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACaaaa < 2:2304712/114‑1 (MQ=255) cTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACaaaa > 1:2304712/1‑114 (MQ=255) acAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTg < 2:1176187/150‑1 (MQ=255) acAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTAAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTg < 1:883993/150‑1 (MQ=255) gCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTgcag < 1:760478/150‑1 (MQ=255) gCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTgcag < 1:1083623/150‑1 (MQ=255) gCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTCGACGCGGGCAAAACCACCACTACCGAGCGGTTCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTgcag < 1:1255683/150‑1 (MQ=255) cAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTgcagg < 2:713775/150‑1 (MQ=255) aTTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTgcaggag > 1:1389049/1‑150 (MQ=255) aaCCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTgcaggagcag > 2:16172/1‑150 (MQ=255) aCCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACg < 1:1421499/114‑1 (MQ=255) aCCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACg > 2:1421499/1‑114 (MQ=255) gCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGgcgc > 2:1957709/1‑115 (MQ=255) gCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGgcgc < 1:1957709/115‑1 (MQ=255) tACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTATGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGGCTGGATGGTGCAGGAGCAGGAGCgg < 1:1900972/150‑1 (MQ=255) aCCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTGCAGGAGCAGGAGCggg < 2:1389049/150‑1 (MQ=255) aCCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTGCAGGAGCAGGAGCggg < 2:1343392/150‑1 (MQ=255) aCCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTGCAGGAGCAGGAGCggg < 1:170632/150‑1 (MQ=255) gTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTGCAGGAGCAGGAGCggg < 2:900134/147‑1 (MQ=255) gTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTGCAGGAGCAGGAGCggg > 1:900134/1‑147 (MQ=255) aaCATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTGCAGGAGCAGGAGCGGGGTATc < 1:549638/150‑1 (MQ=255) aCATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTGCAGGAGCAGGAGCGGGGTATCa < 1:1881214/150‑1 (MQ=255) ttGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTGCAGGAGCAGGAGCgg > 1:1517661/1‑140 (MQ=255) gTATCTGTGCCCACGTTGACGTGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGcgccgc < 1:2251356/103‑1 (MQ=255) gTATCTGTGCCCACGTTGACGTGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGcgccgc > 2:2251356/1‑103 (MQ=255) gTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATGCCGGTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTGCAGGAGCAGGAGCGGGGTATCACCATTa > 1:1227231/1‑150 (MQ=255) tCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCt > 2:1052962/1‑49 (MQ=255) tCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCt < 1:1052962/49‑1 (MQ=255) tgtgCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTGCAGGAGCAGGAGCGGGGTATCa < 2:758307/139‑1 (MQ=255) tgtgCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTGCAGGAGCAGGAGCGGGGTATCa > 1:758307/1‑139 (MQ=255) gtgCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATgg > 1:1861982/1‑114 (MQ=255) gtgCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATgg < 2:1861982/114‑1 (MQ=255) tgCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGa > 1:1307927/1‑98 (MQ=255) tgCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGa < 2:1307927/98‑1 (MQ=255) tgCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTGCAGGAGCAGGAGCGGGGTATCACCATTACCTCCGc > 1:1574934/1‑150 (MQ=255) cccACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGgcgc > 2:6428/1‑91 (MQ=255) cccACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGgcgc < 1:6428/91‑1 (MQ=255) ccACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTGCAGGAGCAGGAGCgggg > 2:1236682/1‑129 (MQ=255) ccACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTGCAGGAGCAGGAGCgggg < 1:1236682/129‑1 (MQ=255) cACGTTGACGCGGGCAATACCACCACTACCGATCGGATCTTGTTCTACACAGGTCTGCGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTGCAGGAGCAGGAGCGGGGTATCACCATTACCTCCGCTGcc < 2:55857/150‑1 (MQ=255) cACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTgcaggagcag > 1:239171/1‑120 (MQ=255) cACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTgcaggagcag < 2:239171/120‑1 (MQ=255) cACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTGCAGGAGCAGGAGCGGGGTATCACCATTACCTCCGCTGcc > 2:2094035/1‑150 (MQ=255) aCGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGa > 2:500867/1‑73 (MQ=255) aCGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGa < 1:500867/73‑1 (MQ=255) gTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTGCAGGAGCAGGAGCGGGGTATCACCATTACCTCCGCTGCCGtt > 1:2283928/1‑150 (MQ=255) gcgGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTGCAGGAGCAGGAGCGGGGTATCACCATTACCTCCGCTGCCGTTaccacc < 2:2081745/150‑1 (MQ=255) gcgGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTGCAGGAGCAGGAGCGGGGTATCACCATTACCTCCGCTGCCGTTaccacc > 2:1266405/1‑150 (MQ=255) gcgGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTGCAGGAGCAGGAGCGGGGTATCACCATTACCTCCGATGCCGTGgccacc > 2:1334414/1‑150 (MQ=255) | TGAAGACGTTCACCGTATGGCTGAAGCCAACAAAGCGTTCTCGCACTACCGCTTCTAATTCAAGCATCAATCTTTTTGCGAGGGCTTTATGGCTCGTACTACAGCAATTAACCGCTACCGTAACATTGGTATCTGTGCCCACGTTGACGCGGGCAAGACCACCACTACCGAGCGGATCCTGTTCTACACAGGTCTGAGCCACAAAATGGGCGAGGTGCATGACGGCGCCGCGACCACCGACTGGATGGTGCAGGAGCAGGAGCGGGGTATCACCATTACCTCCGCTGCCGTTACCACC > NC_002947/547066‑547363 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |