Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,340,1270AG43.4% 87.3 / 149.1 124intergenic (+68/‑263)ribAB‑II/PP_38143,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
Reads supporting (aligned to +/- strand):  ref base A (33/36);  new base G (23/30);  total (56/68)
Fisher's exact test for biased strand distribution p-value = 7.15e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.65e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 133 total aligned reads displayed.

GCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAGGCCGG  >  NC_002947/4339978‑4340275
                                                                                                                                                      |                                                                                                                                                     
gccgcTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGaca                                                                                                                                                       <  1:4162696/150‑1 (MQ=255)
 ccgcTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGacac                                                                                                                                                      <  2:3990009/150‑1 (MQ=255)
       aaaTACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCTGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGa                                                                                                                                                <  1:2574755/150‑1 (MQ=255)
       aaaTACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGa                                                                                                                                                <  1:3484525/150‑1 (MQ=255)
        aaTACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGAc                                                                                                                                               <  1:6508730/150‑1 (MQ=255)
        aaTACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGAc                                                                                                                                               <  2:752294/150‑1 (MQ=255)
         aTACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACaccacc                                                                                                                                                  >  2:2475887/1‑146 (MQ=255)
         aTACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACaccacc                                                                                                                                                  <  1:2475887/146‑1 (MQ=255)
         aTACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACaccacc                                                                                                                                                  <  1:2477508/146‑1 (MQ=255)
              cgGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTc                                                                                                                                         <  1:6468302/150‑1 (MQ=255)
                gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                       <  2:4911678/150‑1 (MQ=25)
                gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                       <  1:2665496/150‑1 (MQ=25)
                gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                       <  1:4859640/150‑1 (MQ=25)
                gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                       <  2:5424933/150‑1 (MQ=25)
                gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                       <  2:4592000/150‑1 (MQ=25)
                gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgc                                                                                                                                       <  2:4985007/150‑1 (MQ=255)
                gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgc                                                                                                                                       <  2:5646411/150‑1 (MQ=255)
                gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgc                                                                                                                                       <  2:4985071/150‑1 (MQ=255)
                gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGAGGGCTGAGAACACACAAGCAATTGATTTCGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                       <  2:4592900/150‑1 (MQ=25)
                 ggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgcg                                                                                                                                      <  2:4923077/150‑1 (MQ=25)
                 ggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgcg                                                                                                                                      <  2:4376919/150‑1 (MQ=255)
                 ggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCAGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgcg                                                                                                                                      <  1:1190366/150‑1 (MQ=25)
                 ggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCAGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgcg                                                                                                                                      <  1:3120013/150‑1 (MQ=25)
                  gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                                     <  2:2824804/150‑1 (MQ=25)
                  gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                                     <  1:3916403/150‑1 (MQ=25)
                  gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                                     <  2:1291605/150‑1 (MQ=25)
                  gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                                     <  2:5927671/150‑1 (MQ=25)
                  gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                                     <  1:752465/150‑1 (MQ=25)
                  gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                                     <  1:3337579/150‑1 (MQ=25)
                  gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                                     <  1:2018097/150‑1 (MQ=255)
                  gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                                     <  1:846470/150‑1 (MQ=255)
                  gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                                     <  1:846411/150‑1 (MQ=255)
                  gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                                     <  1:71079/150‑1 (MQ=255)
                  gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                                     <  1:6080327/150‑1 (MQ=255)
                  gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                                     <  2:767534/150‑1 (MQ=255)
                  gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                                     <  1:3248902/150‑1 (MQ=255)
                  gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                                     <  1:3169968/150‑1 (MQ=255)
                  gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGAGGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                                     <  1:449150/150‑1 (MQ=25)
                   cTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCggg                                                                                                                                    <  1:6313733/150‑1 (MQ=25)
                    tGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGt                                                                                                                                   <  2:3291310/150‑1 (MQ=25)
                        gggCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAAc                                                                                                                               <  2:5421402/150‑1 (MQ=25)
                        gggCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAAc                                                                                                                               <  1:1830136/150‑1 (MQ=255)
                        gggCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAAc                                                                                                                               <  1:3056724/150‑1 (MQ=255)
                        gggCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAAc                                                                                                                               <  1:6311593/150‑1 (MQ=255)
                         ggCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAAcc                                                                                                                              <  1:4474122/150‑1 (MQ=255)
                          gCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAAccc                                                                                                                             <  2:4954249/150‑1 (MQ=255)
                           cTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCg                                                                                                                            <  1:3932838/150‑1 (MQ=21)
                            tATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                       >  2:4184549/1‑138 (MQ=25)
                            tATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                       <  1:4184549/138‑1 (MQ=25)
                                  cTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAAccc                                                                                                                             >  1:6371405/1‑142 (MQ=255)
                                           gtgCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                       <  1:3971355/123‑1 (MQ=21)
                                                              aCCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCAt                                                                                                                                           <  1:3722077/100‑1 (MQ=255)
                                                                  ggggATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGGTTAACCGCGAAAGCGCGGGTGTAACCACCCACGCCATCGCCGGTAAACCCGCACCAACAGGGCCCGTGGTGGTTTTTTCACGGCGGGGTg                                                                                     >  2:5679371/1‑150 (MQ=255)
                                                                              cTGAGGACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACg                                                                                                                                              >  1:2283825/1‑81 (MQ=255)
                                                                              cTGAGGACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACg                                                                                                                                              <  2:2283825/81‑1 (MQ=255)
                                                                                gagaACCCACACGCAATTGATTTCGCGGGGCCCTGTCGGAGC‑GGGTTTCCCCGCGAATGCGCGGGTGACCCCACCGCGGCATTCGCGGGTAACCCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGccc                                                                      <  2:3216589/150‑1 (MQ=255)
                                                                                 agaACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGGTTAACCCCCCATGGGCGGGGTTAACCACCCCCCCCGTAGCCGGGAAAACCCCACCAACACGGCCCAGGGGGCTTTTTTCAGGGCGGGGTGTT‑GGGCGGGcccccc                                                                     >  2:2513427/1‑150 (MQ=255)
                                                                                   aaCACACAAGCACTTGATTGAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCCCCGACGCATGCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCAt                                                                   <  2:4816949/150‑1 (MQ=255)
                                                                                          aaGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGGTTTACCC‑CGAAAGCGCGGGGTGCAACACCCCCCCCGTCGCGGGGGTACCCCCGCCAACAAGGCCCCTGGTTGTTATGACCGGGGGGCGGGATGGGCCGGACCCCCCAAAcacgg                                                             >  2:3818976/1‑146 (MQ=255)
                                                                                                                cTGTAGGAGC‑GGGTTTAACCGCCCATGCGCGGGTGGCACCACCCACCCCGTCGCGGGTAAACCCGCTCCTACAGGGCCCGTGGTGCTTTTGACCGGGCGGCGTGAT‑GGCCGGTCGCCCCCTACCGCTGGCCAAAATCTTGGAATACCcta                                      >  2:6296711/1‑150 (MQ=25)
                                                                                                                        gC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGGAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGGCGCCCCATACCGCTTGCCAAAATCTTGGAATACCATACTATGata                              >  2:2150981/1‑150 (MQ=21)
                                                                                                                            ggTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGTTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATcc                           <  2:5883262/150‑1 (MQ=255)
                                                                                                                            ggTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCtttt                                                                                                   >  2:2102631/1‑79 (MQ=255)
                                                                                                                                 aCCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGCGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGAGATCCCGTAg                      >  2:4482419/1‑150 (MQ=25)
                                                                                                                                  cccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGa                     >  1:6168544/1‑150 (MQ=255)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGcc                                                                       <  2:2680835/99‑1 (MQ=14)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGcc                                                                       >  1:2680835/1‑99 (MQ=14)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc                    >  2:768991/1‑150 (MQ=25)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc                    >  2:5304681/1‑150 (MQ=25)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc                    >  2:4141225/1‑150 (MQ=25)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc                    >  2:3911071/1‑150 (MQ=25)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc                    >  1:1216858/1‑150 (MQ=25)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc                    >  1:3461749/1‑150 (MQ=25)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc                    >  2:1640274/1‑150 (MQ=25)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGATTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc                    >  2:4450278/1‑150 (MQ=25)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCATCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATccc                          <  2:6186533/144‑1 (MQ=25)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCATCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATccc                          >  1:6186533/1‑144 (MQ=25)
                                                                                                                                   ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAg                                                                                                                   >  2:5775759/1‑56 (MQ=255)
                                                                                                                                   ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAg                                                                                                                   <  1:5775759/56‑1 (MQ=255)
                                                                                                                                   ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAGTACCATAATATGATATCCCGTAGAc                    >  1:5753769/1‑150 (MQ=255)
                                                                                                                                   ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTa                       <  2:3417810/147‑1 (MQ=255)
                                                                                                                                   ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc                    >  2:3829212/1‑150 (MQ=255)
                                                                                                                                   ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc                    >  2:3188691/1‑150 (MQ=255)
                                                                                                                                    cgcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc                   >  2:407733/1‑150 (MQ=25)
                                                                                                                                    cgcgAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc                   >  1:1507362/1‑150 (MQ=255)
                                                                                                                                     gcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt                  >  2:1168436/1‑150 (MQ=25)
                                                                                                                                     gcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt                  >  1:3236658/1‑150 (MQ=25)
                                                                                                                                     gcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt                  >  2:2654724/1‑150 (MQ=25)
                                                                                                                                     gcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt                  >  2:6335535/1‑150 (MQ=25)
                                                                                                                                          tGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGt             >  1:4234924/1‑150 (MQ=255)
                                                                                                                                          tGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGt             >  2:3653440/1‑150 (MQ=255)
                                                                                                                                           gCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTc            >  1:1229672/1‑150 (MQ=255)
                                                                                                                                             gAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTg          >  1:485119/1‑150 (MQ=255)
                                                                                                                                             gAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTg          >  1:453127/1‑150 (MQ=255)
                                                                                                                                             gAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTg          >  1:450726/1‑150 (MQ=255)
                                                                                                                                             gAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTg          >  2:212191/1‑150 (MQ=255)
                                                                                                                                             gAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCAGTAGACCTTGAGTCTg          >  2:2209136/1‑150 (MQ=255)
                                                                                                                                               gggTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCa        >  1:2075184/1‑150 (MQ=255)
                                                                                                                                                   gACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAGGcc    >  1:5555911/1‑150 (MQ=255)
                                                                                                                                                     caccacCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAGGCCgg  >  2:5967036/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
GCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGAT‑GGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAGGCCGG  >  NC_002947/4339978‑4340275

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑