| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 3,845,705 | +G | intergenic (‑72/+26) | PP_3394 ← / ← PP_3395 | 3‑hydroxy‑3‑methylglutaryl‑CoA lyase/LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,845,703 | 1 | . | G | 97.7% | 154.6 / 2.7 | 130 | intergenic (‑70/+28) | PP_3394/PP_3395 | 3‑hydroxy‑3‑methylglutaryl‑CoA lyase/LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base . (3/0); new base G (75/52); total (78/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 142 total aligned reads displayed.
GCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑C‑GG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGC > NC_002947/3845579‑3845822 | gCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTcg‑c < 1:4768699/125‑1 (MQ=255)gCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTcg‑c < 1:4768698/125‑1 (MQ=255) ggCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑C‑ggg > 1:4769014/1‑124 (MQ=255) gCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑C‑gggc < 1:4768705/125‑3 (MQ=255) ctctGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑C‑gggct > 1:4769107/1‑122 (MQ=255) tctGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑C‑gggctg > 1:4769044/1‑121 (MQ=255) ctGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑C‑gggctga < 1:4768708/125‑6 (MQ=255) ctGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑C‑gggctga < 1:4768709/125‑6 (MQ=255) gCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCGGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATc < 1:4768712/125‑1 (MQ=255) gCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCATTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑C‑gggct > 1:4769110/1‑118 (MQ=255) aaGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCa < 1:4768715/125‑1 (MQ=255) aaGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCa < 1:4768717/125‑1 (MQ=255) aGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCAt > 1:4769160/1‑125 (MQ=255) aGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCAt < 1:4768720/125‑1 (MQ=255) aGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑C‑GGACTGATCCa > 1:4769007/1‑124 (MQ=255) gCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATc > 1:4769056/1‑125 (MQ=255) gCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATc < 1:4768722/125‑1 (MQ=255) gCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATc > 1:4768962/1‑125 (MQ=255) aTCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTc > 1:4769205/1‑125 (MQ=255) tCGCGCAGGCCGACTTCATTGATTGTTATTGTTTTCATCGCGGTCTCTCTGTCTGAATCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTGTCG‑CGGG‑CTGATCCATCGTCa > 1:4769087/1‑125 (MQ=255) cgcgCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCa < 1:4768726/118‑1 (MQ=255) cgcAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGcc > 1:4769076/1‑125 (MQ=255) gcAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGcc > 1:4768775/1‑124 (MQ=255) ggCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGc < 1:4768727/120‑1 (MQ=255) ccGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATg > 1:4769156/1‑125 (MQ=255) aCTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGAt > 1:4769023/1‑125 (MQ=255) cTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGAt > 1:4769186/1‑124 (MQ=255) cTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATc > 1:4768997/1‑125 (MQ=255) cTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATc > 1:4769155/1‑125 (MQ=255) cTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGCGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATc > 1:4769057/1‑125 (MQ=255) tCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCa > 1:4768881/1‑124 (MQ=255) attgattgTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTACGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGcc > 1:4768989/1‑125 (MQ=255) attgttattgttGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCcg > 1:4768970/1‑123 (MQ=255) ttgttattgttGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGc < 1:4768738/119‑1 (MQ=255) ttgttattgttGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCgcgc > 1:4769111/1‑125 (MQ=255) tgttattgttGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGcc < 1:4768740/125‑1 (MQ=255) gttattgttGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGccc < 1:4768741/125‑1 (MQ=255) ttgttgTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTg < 1:4768744/123‑1 (MQ=255) ttgttgTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGcc < 1:4768746/125‑1 (MQ=255) ttgtCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGACGACGGTCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGACGGATCAGCCCGCGCCCTGCCAgg > 1:4769318/1‑125 (MQ=255) tgtCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGTTCCATCGTCAGc > 1:4769090/1‑95 (MQ=255) tgtCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGc < 1:4768752/125‑1 (MQ=255) gtCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGcc < 1:4768753/125‑1 (MQ=255) tCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTg > 1:4768842/1‑125 (MQ=255) cgcgGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATc < 1:4768756/100‑1 (MQ=255) gTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTTTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACgc > 1:4769059/1‑125 (MQ=255) tctctcTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGTG‑GG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAg > 1:4769212/1‑112 (MQ=255) ctctctGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACgcag < 1:4768762/125‑1 (MQ=255) tctgtctgAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCaa < 1:4768765/125‑1 (MQ=255) tgtctgAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAAc > 1:4768998/1‑124 (MQ=255) gtctgAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAg < 1:4768767/125‑1 (MQ=255) tgAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAggtg > 1:4769074/1‑125 (MQ=255) tgAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAggtg < 1:4768768/125‑1 (MQ=255) tgAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAgg > 1:4769416/1‑123 (MQ=255) aaGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCACCAggtggt > 1:4769021/1‑125 (MQ=255) gCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTc > 1:4769099/1‑124 (MQ=255) gCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCa > 1:4769039/1‑125 (MQ=255) gTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCa > 1:4769211/1‑123 (MQ=255) ttGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTTTTTCG‑C‑GGCCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACCCAGCAACAGGTGGTCaa > 1:4769245/1‑123 (MQ=255) ttGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAg < 1:4768778/124‑1 (MQ=255) ttGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGc < 1:4768780/125‑1 (MQ=255) gcgcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAg < 1:4768782/125‑1 (MQ=255) cgcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAgg < 1:4768783/125‑1 (MQ=255) cgcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAgg > 1:4769075/1‑125 (MQ=255) cgcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAgg > 1:4769139/1‑125 (MQ=255) cAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGgcgc > 1:4769133/1‑125 (MQ=255) aGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGccc < 1:4768785/82‑1 (MQ=255) aGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgcc > 1:4769019/1‑125 (MQ=255) aaGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgagcc > 1:4768999/1‑125 (MQ=255) agagCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgagcc > 1:4769098/1‑124 (MQ=255) gagCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgagc < 1:4768790/122‑1 (MQ=255) tGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa < 1:4768796/123‑1 (MQ=255) tGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAg > 1:4769175/1‑124 (MQ=255) ggATGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCg < 1:4768798/125‑1 (MQ=255) tGACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCg > 1:4769243/1‑122 (MQ=255) gACGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCg < 1:4768800/121‑1 (MQ=255) cGGGCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCg > 1:4769207/1‑125 (MQ=255) ggCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAggtggt > 1:4768940/1‑93 (MQ=255) gCAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCgaga < 1:4768804/119‑1 (MQ=255) cAGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGtgtg > 1:4769181/1‑125 (MQ=255) aGAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGc < 1:4768806/125‑1 (MQ=255) gAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGcc > 1:4769065/1‑125 (MQ=255) gAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGcc > 1:4768984/1‑125 (MQ=255) gAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGcc > 1:4769121/1‑125 (MQ=255) gAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGcc > 1:4769168/1‑125 (MQ=255) gAAAAGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGACCAGTCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGCTGGTCAAGCAGGCGCCGAGCCGACTGCGAGAGCgt > 1:4769303/1‑120 (MQ=255) aaaaGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGTGCGTGTGCCg > 1:4769171/1‑125 (MQ=255) aaaaGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCg > 1:4769458/1‑125 (MQ=255) aaGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGt < 1:4768811/125‑1 (MQ=255) aaGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGt < 1:4768810/125‑1 (MQ=255) aaGACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGt < 1:4768812/125‑1 (MQ=255) gACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCTCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCg > 1:4769270/1‑121 (MQ=255) gACGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCg > 1:4769037/1‑114 (MQ=255) aCGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTcgc > 1:4769120/1‑125 (MQ=255) cGTGTTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTcgc > 1:4768912/1‑124 (MQ=255) gtgtTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGAGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCgcgc > 1:4769048/1‑125 (MQ=255) tgtTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCa < 1:4768817/125‑1 (MQ=255) gtTTCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTcgc > 1:4769068/1‑121 (MQ=255) tttCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCa < 1:4768819/123‑1 (MQ=255) ttCG‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGc < 1:4768821/125‑1 (MQ=255) | GCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑C‑GG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGC > NC_002947/3845579‑3845822 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |