BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	2,328,326	C→T	M1M (ATG→ATA) †	PP_2046 ←	LysR family transcriptional regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,328,326	0	C	T	100.0%	486.5 / NA	179	M1M (ATG→ATA) †	PP_2046	LysR family transcriptional regulator
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (93/86); total (93/86)

Only 100 of 182 total aligned reads displayed.

TCGGCTGGGTCAGGGCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGATCAATCAGGTGGCTGT  >  NC_002947/2328205‑2328447

tCGGCTGGGTCAGGGCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGtata                                                                                                                        <  1:3100495/125‑1 (MQ=255)

 cGGCTGGGTCAGGGCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATAc                                                                                                                       <  1:3100496/125‑1 (MQ=255)

 cGGCTGGGTCAGGGCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATAc                                                                                                                       <  1:3100501/125‑1 (MQ=255)

 cGGCTGGGTCAGGGCCAGACGCTCGGCGGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTAt                                                                                                                         <  1:3100499/123‑1 (MQ=255)

    cTGGGTCAGGGCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGaa                                                                                                                    <  1:3100506/125‑1 (MQ=255)

     tGGGTCAGGGCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAGATATATGGTATACGaaa                                                                                                                   <  1:3100510/125‑1 (MQ=255)

      gggTCAGGGCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAAt                                                                                                                  <  1:3100512/125‑1 (MQ=255)

       ggTCAGGGCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATg                                                                                                                 >  1:3100916/1‑125 (MQ=255)

            gggCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAAt                                                                                                            <  1:3100524/125‑1 (MQ=255)

            gggCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAAt                                                                                                            <  1:3100527/125‑1 (MQ=255)

              gCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGaaa                                                                                                             <  1:3100532/122‑1 (MQ=255)

              gCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAAttt                                                                                                          >  1:3100636/1‑125 (MQ=255)

                cAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAATTGGAAATTTCa                                                                                                        <  1:3100535/125‑1 (MQ=255)

                  gACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCaaa                                                                                                      <  1:3100537/125‑1 (MQ=255)

                  gACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCaaa                                                                                                      <  1:3100539/125‑1 (MQ=255)

                    cGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCaaaaa                                                                                                    <  1:3100543/125‑1 (MQ=255)

                    cGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCaaaaa                                                                                                    <  1:3100541/125‑1 (MQ=255)

                      cTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCaaaaa                                                                                                    <  1:3100546/123‑1 (MQ=255)

                        cGGCTTCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATAcc                                                                                                <  1:3100553/125‑1 (MQ=255)

                        cGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATAcc                                                                                                <  1:3100554/125‑1 (MQ=255)

                        cGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATAc                                                                                                 >  1:3100862/1‑124 (MQ=255)

                         ggCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATAcc                                                                                                <  1:3100557/124‑1 (MQ=255)

                         ggCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCt                                                                                               >  1:3101219/1‑125 (MQ=255)

                          gCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCtt                                                                                              <  1:3100565/125‑1 (MQ=255)

                          gCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATGTCa                                                                                                        >  1:3100808/1‑115 (MQ=255)

                           cTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATAcc                                                                                                >  1:3100677/1‑122 (MQ=255)

                           cTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTc                                                                                             <  1:3100567/125‑1 (MQ=255)

                             gCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCgg                                                                                           <  1:3100571/125‑1 (MQ=255)

                               ccGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGcc                                                                                         <  1:3100577/125‑1 (MQ=255)

                               ccGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGcc                                                                                         <  1:3100576/125‑1 (MQ=255)

                                cGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGc                                                                                          >  1:3100835/1‑123 (MQ=255)

                                cGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCt                                                                                        <  1:3100581/125‑1 (MQ=255)

                                cGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCt                                                                                        >  1:3100894/1‑125 (MQ=255)

                                 gggATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTg                                                                                       <  1:3100584/125‑1 (MQ=255)

                                 gggATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTg                                                                                       >  1:3100642/1‑125 (MQ=255)

                                  ggATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCt                                                                                        >  1:3100849/1‑123 (MQ=255)

                                  ggATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGc                                                                                      >  1:3100926/1‑125 (MQ=255)

                                   gATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCt                                                                                     >  1:3100789/1‑125 (MQ=255)

                                    aTACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCtt                                                                                    >  1:3101039/1‑125 (MQ=255)

                                     tACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTa                                                                                   >  1:3100843/1‑125 (MQ=255)

                                     tACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTa                                                                                   <  1:3100588/125‑1 (MQ=255)

                                     tACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACATTCGGCCTGCTTa                                                                                   >  1:3100967/1‑125 (MQ=255)

                                            tGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGAt                                                                            >  1:3100948/1‑125 (MQ=255)

                                             gTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATc                                                                           <  1:3100595/125‑1 (MQ=255)

                                               tCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATcac                                                                         <  1:3100599/125‑1 (MQ=255)

                                                cACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGGAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATcaca                                                                        >  1:3100940/1‑125 (MQ=255)

                                                 aCGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAg                                                                       <  1:3100602/125‑1 (MQ=255)

                                                  cGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGCAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATAc                                                                                                 >  1:3101493/1‑98 (MQ=255)

                                                     agcaACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTcc                                                                    <  1:3100605/124‑1 (MQ=255)

                                                      gcaACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGt                                                                      >  1:3101044/1‑121 (MQ=255)

                                                       caACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCa                                                                 <  1:3100609/125‑1 (MQ=255)

                                                         aCATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATa                                                               >  1:3101003/1‑125 (MQ=255)

                                                           aTGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATAcc                                                             >  1:3100914/1‑125 (MQ=255)

                                                           aTGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATAcc                                                             <  1:3100615/125‑1 (MQ=255)

                                                            tGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATAcc                                                             >  1:3100825/1‑124 (MQ=255)

                                                            tGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATACTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCt                                                            >  1:3100954/1‑125 (MQ=255)

                                                              tCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTa                                                           >  1:3101026/1‑124 (MQ=255)

                                                                 aaGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAg                                                       >  1:3100873/1‑125 (MQ=255)

                                                                  aGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACaa                                                        >  1:3101355/1‑123 (MQ=255)

                                                                  aGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGa                                                      <  1:3100620/125‑1 (MQ=255)

                                                                     cgcgCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGaaa                                                    <  1:3100621/124‑1 (MQ=255)

                                                                      gcgcAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGc                                                  <  1:3100623/125‑1 (MQ=255)

                                                                         cagcagGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAgg                                               <  1:3100627/125‑1 (MQ=255)

                                                                         cagcagGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAACGGAGATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCTTCATACCTACAAGAAAGCa                                                 >  1:3100996/1‑123 (MQ=255)

                                                                          agcagGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGa                                              >  1:3101033/1‑125 (MQ=255)

                                                                           gcagGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAg                                             <  1:3100631/125‑1 (MQ=255)

                                                                           gcagGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGG‑‑GATCACAGTCCTCATACCTACAAGAAAGCAGGAGCg                                           >  1:3101180/1‑125 (MQ=255)

                                                                               gTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATCTGGTATACGAAATGGaact                                                                                                            >  1:3101133/1‑56 (MQ=255)

                                                                               gTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGtt                                         <  1:3100638/125‑1 (MQ=255)

                                                                                  cAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTgc                                       >  1:3100885/1‑124 (MQ=255)

                                                                                   aGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACATTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTgcgc                                     >  1:3101248/1‑125 (MQ=255)

                                                                                    ggTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTgcgc                                     <  1:3100645/124‑1 (MQ=255)

                                                                                     gTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGt                                   <  1:3100647/125‑1 (MQ=255)

                                                                                         aaGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAAt                               >  1:3101032/1‑125 (MQ=255)

                                                                                         aaGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAAt                               >  1:3100961/1‑125 (MQ=255)

                                                                                          aGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATa                              <  1:3100653/125‑1 (MQ=255)

                                                                                           gTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATAc                             >  1:3100879/1‑125 (MQ=255)

                                                                                              cGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTcc                          <  1:3100661/125‑1 (MQ=255)

                                                                                              cGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTcc                          >  1:3100660/1‑125 (MQ=255)

                                                                                                 aaTATTCCTGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCATGCATACTc                           >  1:3100990/1‑121 (MQ=255)

                                                                                                 aaTATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTccc                         >  1:3101229/1‑123 (MQ=255)

                                                                                                 aaTATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCtt                       >  1:3101169/1‑125 (MQ=255)

                                                                                                 aaTATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCtt                       <  1:3100667/125‑1 (MQ=255)

                                                                                                     ttCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTccc                    >  1:3101107/1‑124 (MQ=255)

                                                                                                     ttCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTc                      >  1:3100984/1‑122 (MQ=255)

                                                                                                      tCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGa                  <  1:3100673/125‑1 (MQ=255)

                                                                                                      tCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGa                  >  1:3101077/1‑125 (MQ=255)

                                                                                                       cATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGat                 >  1:3100887/1‑125 (MQ=255)

                                                                                                        aTGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCg                   >  1:3101012/1‑122 (MQ=255)

                                                                                                        aTGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGatc                >  1:3100782/1‑125 (MQ=255)

                                                                                                              aaaaTATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGATCAATCAg          >  1:3101061/1‑125 (MQ=255)

                                                                                                               aaaTATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGATCAATCAgg         <  1:3100681/125‑1 (MQ=255)

                                                                                                                aaTATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGATCAATCAGGt        >  1:3100818/1‑125 (MQ=255)

                                                                                                                aaTATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGATCAATCAGGt        >  1:3100864/1‑125 (MQ=255)

                                                                                                                  tatgtGGTATACGAAATGGAAATTTCAAAAATACCTTCGGGCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTc                           <  1:3100685/104‑1 (MQ=255)

                                                                                                                    tatGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGATCAATCAGGTgg      >  1:3101200/1‑123 (MQ=255)

                                                                                                                    tatGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGATCAATCAGGTGGc     >  1:3101117/1‑124 (MQ=255)

                                                                                                                    tatGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATAACTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGATCAATCAGGTGGc     >  1:3100971/1‑124 (MQ=255)

                                                                                                                      tGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGATCAATCAGGTGGc     >  1:3100851/1‑122 (MQ=255)

                                                                                                                      tGGTATACGAAACGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGATCAATCAGGTGGCtgt  <  1:3100688/125‑1 (MQ=255)

TCGGCTGGGTCAGGGCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGATCAATCAGGTGGCTGT  >  NC_002947/2328205‑2328447

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`