New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	524339 =	125 (1.150)	7 (0.070)	3/224	14.8	9.9%	intergenic (+206/‑610)	tyrS/PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
	?	NC_002947	4808203 =	13 (0.130)					intergenic (‑312/‑243)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAAAGACCGTATCGAGGCTGCCAAGTGTTCGCCACGACAGTTTCAGCGCCTATGAGACCGAGCGCCGCCCGCGCGGCGCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/524472‑524339 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgctcgATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCA  >  NC_002947/4808203‑4808316                                                                                                                                                                                                                                                          GGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAAAGACCGTATCGAGGCTGCCAAGTGTTCGCCACGACAGTTTCAGCGCCTATGAGACCGAGCGCCGCCCGCG                                                                                                                             <  1:508633/125‑1    ATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAAAGACCGTATCGAGGCTGCCAAGTGTTCGCCACGACAGTTTCAGCGCCTATGAGACCGAGCGCCGCCCGCGCGG                                                                                                                          >  1:508395/1‑125    ATTCGAGAGGGCGTCAACCTTGAATTTCAAGAAAGTGAAATATAAGGGGAAAAGACCGTATCGAGGCTGCCAAGTGTTCGCCACGACAGTTTCAGCGCCTATGAGACCGAGCGCCGCCCGCGCGG                                                                                                                          <  1:508631/125‑1     TTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAAAGACCGTATCGAGGCTGCCAAGTGTTCGCCACGACAGTTTCAGCGCCTATGAGACCGAGCGCCGCCCGCGCGG                                                                                                                          <  1:508926/124‑1        GAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAAAGACCGTATCGAGGCTGCCAAGTGTTCGCCACGACAGTTTCAGCGCCTATGAGACCGAGCGCCGCCCGCGCGGCGC                                                                                                                       >  1:508387/1‑124        GAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAAAGACCGTATCGAGGCTGCCAAGTGTTCGCCACGACAGTTTCAGCGCCTATGAGACCGAGCGACGCCCGCGCGGCGC                                                                                                                       >  1:508389/1‑124         AGAGGGCGTCAACCTTTAATTTCAAGTAAGTGAAATATAAGGGGAAAAGACCGTATCGAGGCTGCCAAGTGTTCGCCACGACAGTTTCAGCGCCTATGAGACCGAGCGCCGCCCGCGCGGCGCTC                                                                                                                     >  1:508385/1‑125         AGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAAAGACCGTATCGAGGCTGCCAAGTGTTCGCCACGACAGTTTCAGCGCCTATGAGACCGAGCGCCGCCCGCGCGGCGCTC                                                                                                                     >  1:508386/1‑125         AGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAAAGACCGTATCGAGGCTGCCAAGTGTTCGCCACGACAGTTTCAGCGCCTATGAGACCGAGCGCCGCCCGCGCGGCGCTC                                                                                                                     >  1:508384/1‑125         AGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAAAGACCGTATCGAGGCTGCCAAGTGTTCGCCACGACAGTTTCAGCGCCTATGAGACCGAGCGCCGCCCGCGCGGCG                                                                                                                        >  1:508390/1‑122         AGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAAAGACCGTATCGAGGCTGCCAAGTGTTCGCCACGACAGTTTCAGCGCCTATGAGACCGAGCGCCGCCCGCGCGGC                                                                                                                         >  1:508392/1‑121          GAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAAAGACCGTATCGAGGCTGCCAAGTGTTCGCCACGACAGTTTCAGCGCCTATGAGACCGAGCGCCGCCCGCGCGGCGCTCG                                                                                                                    >  1:508382/1‑125           AGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAAAGACCGTATCGAGGCTGCCAAGTGTTCGCCACGACAGTTTCAGCGCCTATGAGACCGAGCGCCGCCCGCGCGGCGCTCG                                                                                                                    <  1:508732/124‑1                                                                       tgggagGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAA                                                       >  1:4084457/7‑125                                                                         ggatGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACT                                                          <  1:4084421/116‑1                                                                                TTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAAC                                              >  1:4084517/1‑125                                                                                         agAGTTTCAGCGCCTGGGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCC                                     >  1:4084504/3‑125                                                                                                                  GCGCCGCCCGCGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCC              <  1:4084439/123‑1                                                                                                                         CCGCGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACGCAAAATTACAACGCCGCCCCCACAAAATTCCAACGCCGCCTCCCCTCGAAAA      >  1:4084534/1‑124                                                                                                                            CGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCA  >  1:4084480/1‑125                                                                                                                                                                                                                                                          GGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAAAGACCGTATCGAGGCTGCCAAGTGTTCGCCACGACAGTTTCAGCGCCTATGAGACCGAGCGCCGCCCGCGCGGCGCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/524472‑524339 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgctcgATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCA  >  NC_002947/4808203‑4808316

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.