Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_002947 4,874,327 A→T L69Q (CTG→CAG)  PP_4283 ← GntR family transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,874,3270AT99.5% 722.7 / NA 214L69Q (CTG→CAG) PP_4283GntR family transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (87/126);  minor base G (0/1);  total (87/127)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 214 total aligned reads displayed.

TCGGTGATGGCGCGTTCGACCATGCGCCGCGAGAAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCAGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACGCTGCTCGAGGATCGCCTCGAAAATATGCGC  >  NC_002947/4874207‑4874448
                                                                                                                        |                                                                                                                         
tCGGTGATGGCGCGTTCGACCATGCGCCGCGAGAAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGgc                                                                                                                        <  2:4161627/124‑1 (MQ=255)
 cGGTGATGGCGCGTTCGACCATGCGCCGCGAGAAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGgcg                                                                                                                       <  1:4161628/124‑1 (MQ=255)
  ggTGATGGCGCGTTCGACCATGCGCCGCGAGAAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGcgcg                                                                                                                     >  1:4161720/1‑125 (MQ=255)
    tGATGGCGCGTTCGACCATGCGCCGCGAGAAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGAc                                                                                                                   >  1:4162115/1‑125 (MQ=255)
       tGGCGCGTTCGACCATGCGCCGCGAGAAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACaa                                                                                                                 <  2:4161630/124‑1 (MQ=255)
        ggCGCGTTCGACCATGCGCCGCGAGAAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAgg                                                                                                               <  1:4161632/125‑1 (MQ=255)
        ggCGCGTTCGACCATGCGCCGCGAGAAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAg                                                                                                                <  2:4161634/124‑1 (MQ=255)
         gcgcGTTCGACCATGCGCCGCGAGAAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAgg                                                                                                               >  1:4161876/1‑124 (MQ=255)
         gcgcGTTCGACCATGCGCCGCGAGAAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGgc                                                                                                              >  2:4161713/1‑125 (MQ=255)
         gcgcGTTCGACCATGCGCCGCGAGAAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGgc                                                                                                              <  1:4161637/125‑1 (MQ=255)
           gcgTTCGACCATGCGCCGCGAGAAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCCCCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGgcg                                                                                                             >  1:4161751/1‑124 (MQ=255)
             gTTCGACCATGCGCCGCGAGAAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGcgcg                                                                                                           <  2:4161640/124‑1 (MQ=255)
             gTTCGACCATGCGCCGCGAGAAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCgcgg                                                                                                          <  1:4161639/125‑1 (MQ=255)
                 gACCATGCGCCGCGAGAAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGga                                                                                                      <  2:4161643/125‑1 (MQ=255)
                  aCCATGCGCCGCGAGAAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGgat                                                                                                     >  2:4161728/1‑125 (MQ=255)
                    cATGCGCCGCGAGAAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGgatga                                                                                                   <  1:4161644/125‑1 (MQ=255)
                      tGCGCCGCGAGAAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGgatgat                                                                                                  <  1:4161646/124‑1 (MQ=255)
                       gcgcCGCGAGAAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATgg                                                                                                <  1:4161649/125‑1 (MQ=255)
                         gccgcGAGAAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACGAGGCGCGGCGGATGATGGTg                                                                                              <  1:4161652/125‑1 (MQ=255)
                          ccgcGAGAAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGc                                                                                             <  2:4161653/125‑1 (MQ=255)
                           cgcgAGAAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGc                                                                                             <  2:4161655/124‑1 (MQ=255)
                              gagaAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCt                                                                                         >  1:4161853/1‑125 (MQ=255)
                               agaagaACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTg                                                                                        >  1:4161732/1‑125 (MQ=255)
                               agaagaACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTg                                                                                        >  2:4161916/1‑125 (MQ=255)
                               agaagaACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTg                                                                                        <  1:4161659/125‑1 (MQ=255)
                                   gaaCACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGc                                                                                    <  1:4161661/125‑1 (MQ=255)
                                      cacCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCaa                                                                                 <  2:4161663/125‑1 (MQ=255)
                                       acCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCaaa                                                                                <  1:4161664/125‑1 (MQ=255)
                                        ccTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAg                                                                               <  2:4161666/125‑1 (MQ=255)
                                          tGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGa                                                                                                                    >  1:4161895/1‑86 (MQ=255)
                                          tGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGAt                                                                             >  2:4161810/1‑125 (MQ=255)
                                          tGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGAt                                                                             >  2:4161929/1‑125 (MQ=255)
                                          tGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGAt                                                                             <  1:4161668/125‑1 (MQ=255)
                                          tGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGAGCGGCTGACGCCAAAGAt                                                                             >  1:4161924/1‑125 (MQ=255)
                                           ggCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGAtc                                                                            >  2:4161874/1‑125 (MQ=255)
                                           ggCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGAtc                                                                            <  1:4161673/125‑1 (MQ=255)
                                           ggCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGAtc                                                                            <  1:4161671/125‑1 (MQ=255)
                                             cgcgcCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGAtctc                                                                          >  2:4161960/1‑125 (MQ=255)
                                             cgcgcCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGAtctc                                                                          <  1:4161675/125‑1 (MQ=255)
                                                 ccTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGccc                                                                      >  1:4162143/1‑125 (MQ=255)
                                                   tctTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGccc                                                                      >  2:4162128/1‑123 (MQ=255)
                                                   tctTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAg                                                                    <  2:4161678/125‑1 (MQ=255)
                                                    ctTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAg                                                                    >  1:4161859/1‑124 (MQ=255)
                                                     ttCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAgc                                                                   <  2:4161681/124‑1 (MQ=255)
                                                        gACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCt                                                                <  2:4161683/124‑1 (MQ=255)
                                                         aCGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCtt                                                               <  1:4161685/124‑1 (MQ=255)
                                                          cGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTcc                                                             <  2:4161689/125‑1 (MQ=255)
                                                          cGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGAAGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTcc                                                             <  1:4161688/125‑1 (MQ=255)
                                                           ggTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTcc                                                             >  1:4161907/1‑124 (MQ=255)
                                                           ggTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCt                                                            <  1:4161691/125‑1 (MQ=255)
                                                           ggTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCt                                                            <  1:4161694/125‑1 (MQ=255)
                                                            gTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTc                                                           >  1:4161978/1‑125 (MQ=255)
                                                                ggCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTc                                                       >  1:4162044/1‑125 (MQ=255)
                                                                   tGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAAGCGcggcgg                                                                                                       >  2:4161883/1‑74 (MQ=255)
                                                                    ggCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACt                                                   >  2:4162014/1‑125 (MQ=255)
                                                                    ggCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACt                                                   <  1:4161696/125‑1 (MQ=255)
                                                                      ccaccaCCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTg                                                 <  1:4161698/125‑1 (MQ=255)
                                                                        accaccGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGt                                               >  1:4161816/1‑125 (MQ=255)
                                                                         ccaccGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTg                                              >  2:4161975/1‑125 (MQ=255)
                                                                         ccaccGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTg                                              <  2:4161700/125‑1 (MQ=255)
                                                                          caccgcaccgCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGc                                             <  1:4161702/125‑1 (MQ=255)
                                                                          caccgcaccgCGGTTCGCTCGTAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTACTCGCTCAACTTGGTGc                                             >  2:4161918/1‑125 (MQ=255)
                                                                             cgcaccgcGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCg                                          <  2:4161704/125‑1 (MQ=255)
                                                                                 ccgcGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCg                                          >  2:4161864/1‑121 (MQ=255)
                                                                                 ccgcGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAg                                       <  1:4161706/124‑1 (MQ=255)
                                                                                 ccgcGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGc                                      >  2:4161921/1‑125 (MQ=255)
                                                                                   gcgGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAg                                       <  2:4161711/122‑1 (MQ=255)
                                                                                   gcgGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACACCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCa                                    <  1:4161709/125‑1 (MQ=255)
                                                                                    cgGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAg                                   <  1:4161712/125‑1 (MQ=255)
                                                                                     ggTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGa                                  <  2:4161715/125‑1 (MQ=255)
                                                                                      gTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTTCCCGGAGCCa                                    >  2:4162028/1‑122 (MQ=255)
                                                                                      gTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGAc                                 <  1:4161717/125‑1 (MQ=255)
                                                                                      gTTCGGTCGCAGCAGCACCACGCTTTAGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCt                                                            >  1:4162064/1‑98 (MQ=255)
                                                                                       ttCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGAc                                 >  2:4161904/1‑124 (MQ=255)
                                                                                        tCGGTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACgc                               <  2:4161719/125‑1 (MQ=255)
                                                                                          ggTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACgctg                             <  1:4161723/125‑1 (MQ=255)
                                                                                           gTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACgctgc                            <  2:4161726/125‑1 (MQ=255)
                                                                                           gTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACgctgc                            <  1:4161725/125‑1 (MQ=255)
                                                                                           gTCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACgctg                             >  1:4161984/1‑124 (MQ=255)
                                                                                            tCGCAGCAGCACCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACATGGTGCCCGGAGCCAGACgctgc                            >  1:4162018/1‑124 (MQ=255)
                                                                                              gcagcagcaCCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACGCTGCTCg                         <  2:4161731/125‑1 (MQ=255)
                                                                                                 gcagcaCCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACGCTGCTCGAgg                      >  2:4161842/1‑125 (MQ=255)
                                                                                                 gcagcaCCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACGCTGCTCGAgg                      <  2:4161733/125‑1 (MQ=255)
                                                                                                 gcagcaCCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACGCTGCTCGAgg                      >  2:4161894/1‑125 (MQ=255)
                                                                                                    gcaCCACGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACGCTGCTCGAGGATc                   <  2:4161735/125‑1 (MQ=255)
                                                                                                     caccacGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACGCTGCTCGAGGATCg                  <  2:4161737/125‑1 (MQ=255)
                                                                                                      accacGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACGCTGCTCGAGGATCGc                 <  2:4161739/125‑1 (MQ=255)
                                                                                                      accacGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACGCTGCTCGAGGATCGc                 >  2:4162047/1‑125 (MQ=255)
                                                                                                      accacGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACGCTGCTCGAGGATCGc                 >  2:4161850/1‑125 (MQ=255)
                                                                                                       ccacGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACGCTGCTCGAGGATCGcc                <  1:4161742/125‑1 (MQ=255)
                                                                                                        cacGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACGCTGCTCGAGGATCGcc                >  1:4161944/1‑124 (MQ=255)
                                                                                                         acGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACGCTGCTCGAGGATCGCCTc              >  1:4161947/1‑125 (MQ=255)
                                                                                                          cGCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACGCTGCTCGAGGATCGCCTc              <  1:4161745/124‑1 (MQ=255)
                                                                                                           gCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACGCTGCTCGAGGATCGCCTCGa            <  1:4161747/125‑1 (MQ=255)
                                                                                                           gCTTTCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACGCTGCTCGAGGATCGCCTCGa            <  2:4161746/125‑1 (MQ=255)
                                                                                                           gCTCTCGTGGGCCTGGCGCGACAAGGCGCGCCGGATGATGGTGCGGCTGACGCCAAAGAtct                                                                           >  2:4162009/1‑62 (MQ=255)
                                                                                                              ttCGTGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACGCTGCTCGAGGATCGCCTCGaaaa         <  1:4161749/125‑1 (MQ=255)
                                                                                                                  tGGGCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACGCTGCTCGAGGATCGCCTCGAAAATATg     <  2:4161753/125‑1 (MQ=255)
                                                                                                                    ggCCGGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGGCAAAGATCGCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACGCTGCTCGAGGAt                    <  1:4161754/108‑1 (MQ=255)
                                                                                                                     gCCTGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACGCTGCTCGAGGATCGCCTCGAAAATATgcgc  >  1:4161957/1‑125 (MQ=255)
                                                                                                                        |                                                                                                                         
TCGGTGATGGCGCGTTCGACCATGCGCCGCGAGAAGAACACCTGGCGCGCCTCTTCGACGGTCGGGCTGGCCACCACCGCACCGCGGTTCGGTCGCAGCAGCACCACGCTTTCGTGGGCCAGGCGCGACAAGGCGCGGCGGATGATGGTGCGGCTGACGCCAAAGATCTCGCCCAGCGCTTCCTCGCTCAACTTGGTGCCCGGAGCCAGACGCTGCTCGAGGATCGCCTCGAAAATATGCGC  >  NC_002947/4874207‑4874448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 42 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑