BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	4,586,030	2 bp→TC	intergenic (+113/+101)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	4,586,030	0	C	T	100.0%	533.2 / NA	187	intergenic (+113/+102)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (109/78); total (109/78)
*	NC_002947	4,586,031	0	T	C	100.0%	232.9 / NA	187	intergenic (+114/+101)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (109/78); total (109/78)

Only 100 of 187 total aligned reads displayed.

GGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTCTGC‑G‑G‑TAAACCCGCTCCTACCAGG‑GA‑CGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGCAGATG  >  NC_002947/4585911‑4586145

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ggCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGC‑g‑g                                                                                                                   >  1:3885116/1‑125 (MQ=255)

  cTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGC‑g‑ggt                                                                                                                 >  1:3885201/1‑123 (MQ=255)

   ttAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGC‑g‑ggta                                                                                                                <  2:3884837/125‑4 (MQ=255)

     aaGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGC‑g‑ggtaaa                                                                                                              >  2:3885186/1‑120 (MQ=255)

       gggTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAAcc                                                                                                            <  1:3884838/125‑1 (MQ=255)

        ggTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAAccc                                                                                                           <  1:3884839/125‑1 (MQ=255)

        ggTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAAccc                                                                                                           >  2:3885113/1‑125 (MQ=255)

           aGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCt                                                                                                        <  2:3884842/125‑1 (MQ=255)

            gACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAAccc                                                                                                           >  2:3885022/1‑121 (MQ=255)

            gACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTc                                                                                                       <  1:3884843/125‑1 (MQ=255)

            gACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTc                                                                                                       >  2:3885114/1‑125 (MQ=255)

              ccACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCt                                                                                                     >  2:3885106/1‑125 (MQ=39)

               cACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAATCCGCTc                                                                                                       >  1:3885244/1‑122 (MQ=255)

                aCGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTAc                                                                                                   <  2:3884845/125‑1 (MQ=39)

                 cGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTAcc                                                                                                  >  2:3884955/1‑125 (MQ=255)

                 cGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTAcc                                                                                                  >  1:3885030/1‑125 (MQ=39)

                  ggCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCa                                                                                                 >  1:3885025/1‑125 (MQ=255)

                    cACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAgg                                                                                               >  2:3884984/1‑125 (MQ=255)

                       cGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GA‑c                                                                                          <  2:3884849/125‑1 (MQ=38)

                       cGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GA‑c                                                                                          <  1:3884850/125‑1 (MQ=38)

                           gTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GA‑ccgtg                                                                                      >  2:3885097/1‑121 (MQ=38)

                            tGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GA‑ccgtgc                                                                                     >  1:3885269/1‑120 (MQ=38)

                            tGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GA‑ccgtgc                                                                                     >  1:3885091/1‑120 (MQ=38)

                            tGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GA‑ccgtgc                                                                                     >  1:3884982/1‑120 (MQ=38)

                            tGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GA‑ccgtgc                                                                                     >  1:3884988/1‑120 (MQ=38)

                            tGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GA‑ccgtgc                                                                                     >  1:3885042/1‑120 (MQ=38)

                             gAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGcc                                                                                     <  1:3884854/125‑1 (MQ=38)

                              aaCAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCAGCTCCTACCAGG‑GACCGTGCCg                                                                                    >  2:3884997/1‑125 (MQ=38)

                               aCAGCTGATCTGCGCTGCTCCATTTAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCgg                                                                                   <  2:3884856/125‑1 (MQ=37)

                                cAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGc                                                                                  <  1:3884857/125‑1 (MQ=38)

                                 aGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGcc                                                                                 <  2:3884859/125‑1 (MQ=38)

                                  gCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCt                                                                                >  1:3885067/1‑125 (MQ=38)

                                    tGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGc                                                                                                         >  2:3885031/1‑99 (MQ=38)

                                      aTCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGaa                                                                            <  2:3884861/125‑1 (MQ=38)

                                      aTCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGaa                                                                            >  2:3885142/1‑125 (MQ=38)

                                        cTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATg                                                                          <  2:3884863/125‑1 (MQ=38)

                                         tGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATg                                                                          >  2:3885392/1‑124 (MQ=38)

                                          gcgcTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACGCGCTCCTACCAGG‑GACCGTTCCTGCCttta                                                                             >  2:3885241/1‑118 (MQ=25)

                                          gcgcTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATgcg                                                                        <  1:3884864/125‑1 (MQ=38)

                                           cgcTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATgcgg                                                                       >  2:3885179/1‑125 (MQ=38)

                                            gctgctCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATgcggc                                                                      >  1:3885015/1‑125 (MQ=38)

                                            gctgctCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGAGCCGGCCTTGAATgcgg                                                                       <  2:3884867/124‑1 (MQ=37)

                                             ctgctCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATgcggcg                                                                     >  1:3885154/1‑125 (MQ=38)

                                              tgctCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGgcgc                                                                    <  1:3884868/125‑1 (MQ=38)

                                                ctCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCGGGCCTCTTCGCGG‑G‑TAAACCCGCTACTACCGGG‑GACCGTGCCGGGCTTGAATCCGGCGCt                                                                   >  2:3885215/1‑124 (MQ=37)

                                                  ccATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGcc                                                                >  1:3885210/1‑125 (MQ=38)

                                                   cATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGccc                                                               >  2:3884925/1‑125 (MQ=38)

                                                   cATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGccc                                                               >  2:3884978/1‑125 (MQ=38)

                                                    aTTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGcccc                                                              >  1:3884946/1‑125 (MQ=38)

                                                     ttGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCt                                                             <  1:3884870/125‑1 (MQ=38)

                                                      tGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTg                                                            <  1:3884872/125‑1 (MQ=38)

                                                      tGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTg                                                            >  1:3885181/1‑125 (MQ=38)

                                                        aaaGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGt                                                          <  1:3884875/125‑1 (MQ=38)

                                                        aaaGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGt                                                          <  2:3884874/125‑1 (MQ=38)

                                                          aGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAg                                                        >  1:3885225/1‑125 (MQ=38)

                                                          aGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAg                                                        <  2:3884877/125‑1 (MQ=38)

                                                            gTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAg                                                        >  2:3885009/1‑123 (MQ=37)

                                                              tGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGc                                                    >  2:3885131/1‑125 (MQ=38)

                                                               gAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCg                                                   <  1:3884880/125‑1 (MQ=38)

                                                                aGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCgg                                                  >  1:3885133/1‑125 (MQ=38)

                                                                  gATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGt                                                <  2:3884881/125‑1 (MQ=38)

                                                                    tGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGttt                                              <  1:3884883/125‑1 (MQ=38)

                                                                     gACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTa                                             >  1:3885083/1‑125 (MQ=37)

                                                                     gACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTa                                             >  2:3885163/1‑125 (MQ=37)

                                                                       ccGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAATGCGCTCTTAGCAGG‑GA‑ctgt                                                                                       >  2:3885202/1‑77 (MQ=21)

                                                                       ccGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTTGTAGGAGCGGGTTTa                                             <  2:3884887/123‑1 (MQ=37)

                                                                       ccGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTAcc                                           <  1:3884886/125‑1 (MQ=37)

                                                                       ccGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTAcc                                           >  1:3885151/1‑125 (MQ=37)

                                                                        cGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTAccc                                          <  2:3884889/125‑1 (MQ=37)

                                                                         gggTGCTTGGCAAGGTGAAGATCTTGCATTTAGCGGGCCGGCCTCTTCGC‑G‑GTTAAACCCGCTCCTACCAGGATC‑CGTGCTGGCCTTGAATgcggc                                                                      <  2:3884891/96‑1 (MQ=21)

                                                                          ggTGCTTGGCAGGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTAccc                                          >  2:3885155/1‑123 (MQ=37)

                                                                          ggTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGC‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCcgc                                        >  1:3885280/1‑125 (MQ=37)

                                                                           gTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCcgc                                        >  2:3885149/1‑124 (MQ=37)

                                                                            tGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCcgc                                        >  2:3885020/1‑123 (MQ=37)

                                                                            tGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGa                                      <  1:3884893/125‑1 (MQ=37)

                                                                              cTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGC‑GCG‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGa                                      >  2:3885069/1‑123 (MQ=37)

                                                                               ttGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAaga                                   >  1:3885125/1‑125 (MQ=37)

                                                                                tGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAagag                                  <  1:3884895/125‑1 (MQ=37)

                                                                                   cAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAggcc                               <  1:3884896/125‑1 (MQ=37)

                                                                                    aaGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAggccg                              >  2:3885283/1‑125 (MQ=37)

                                                                                     aGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAggccgg                             <  1:3884898/125‑1 (MQ=37)

                                                                                      ggTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAggccgg                             >  1:3885084/1‑124 (MQ=37)

                                                                                        tGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAggccggcc                           >  2:3885119/1‑124 (MQ=25)

                                                                                        tGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGgccggccg                          <  1:3884900/125‑1 (MQ=37)

                                                                                            gATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGcc                      >  1:3885098/1‑125 (MQ=37)

                                                                                             aTCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCa                     <  2:3884901/125‑1 (MQ=37)

                                                                                                ttGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGca                  <  1:3884905/125‑1 (MQ=37)

                                                                                                ttGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGca                  <  2:3884903/125‑1 (MQ=37)

                                                                                                 tGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGcccc                                                              >  2:3885061/1‑80 (MQ=18)

                                                                                                 tGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCcgcg                                       >  2:3885312/1‑103 (MQ=21)

                                                                                                 tGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGcac                 <  1:3884907/125‑1 (MQ=37)

                                                                                                   cATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGcaca                >  2:3885007/1‑124 (MQ=37)

                                                                                                       gATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGCGGCCGGCCGCGCCAGCACATCAAc           >  1:3885377/1‑125 (MQ=25)

                                                                                                       gATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCaa            <  2:3884909/124‑1 (MQ=37)

                                                                                                           gggCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCg        <  2:3884911/124‑1 (MQ=37)

                                                                                                            ggccggccTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGc       >  2:3885081/1‑124 (MQ=37)

                                                                                                            ggccggccTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGc       >  1:3885168/1‑124 (MQ=37)

                                                                                                            ggccggccTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGCa      >  1:3885110/1‑125 (MQ=37)

                                                                                                                ggccTCTTCGCGG‑G‑TAAACCCGCTCCTCCCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGCAGATg  <  1:3884923/125‑1 (MQ=37)

                                                                                                                ggccTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGG‑GACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGttt                                              <  2:3884916/81‑1 (MQ=18)

||

GGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTCTGC‑G‑G‑TAAACCCGCTCCTACCAGG‑GA‑CGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGCAGATG  >  NC_002947/4585911‑4586145

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`