| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 278,744 | +A | intergenic (‑239/+75) | PP_0224 ← / ← sctC | DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 278,742 | 1 | . | A | 94.0% | 632.8 / 36.4 | 218 | intergenic (‑237/+77) | PP_0224/sctC | DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base . (5/8); new base A (119/86); total (124/94) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 227 total aligned reads displayed.
AGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGT‑A‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGC > NC_002947/278618‑278861 | aGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGt < 2:224292/125‑1 (MQ=255)aGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGt > 1:224369/1‑125 (MQ=255) gACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGT‑a > 1:224546/1‑125 (MQ=255) gtgtGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGT‑a‑aa < 1:224293/124‑2 (MQ=255) tgtgCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGT‑A‑A‑acc > 2:224701/1‑125 (MQ=255) tgtgCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGT‑A‑A‑acc < 2:224296/125‑1 (MQ=255) cTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGT‑a‑aa > 1:224765/1‑118 (MQ=255) gtccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCt > 2:224572/1‑125 (MQ=255) gtccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCt > 2:224551/1‑125 (MQ=255) cggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTaca < 1:224299/125‑1 (MQ=255) gtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTacaca > 1:224604/1‑125 (MQ=255) gtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAAAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTacaca > 2:224515/1‑125 (MQ=255) ttgtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCCGGTAA‑A‑CCCGCTCCt > 2:224855/3‑119 (MQ=255) ggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTAcacaca < 2:224300/125‑1 (MQ=255) ccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGc < 2:224302/125‑1 (MQ=255) ggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGTGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTacacac > 2:224469/1‑119 (MQ=255) gtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACAt < 1:224307/120‑1 (MQ=255) tatatataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGcc < 2:224308/122‑1 (MQ=255) tatatataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCa > 2:224620/1‑125 (MQ=255) ataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATc < 2:224313/125‑1 (MQ=255) ataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATc > 2:224496/1‑125 (MQ=255) taCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCt > 1:224673/1‑125 (MQ=255) cccTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCa > 2:224597/1‑117 (MQ=255) ccTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCtgtg < 2:224315/125‑1 (MQ=255) cTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCACGATCtgtg > 2:224557/1‑124 (MQ=255) cTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCtg < 1:224319/122‑1 (MQ=255) cTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGc > 2:224440/1‑125 (MQ=255) cTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGc > 1:224471/1‑125 (MQ=255) cTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGc < 2:224317/125‑1 (MQ=255) tAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAg > 1:224637/1‑116 (MQ=255) tAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATc > 1:224652/1‑119 (MQ=255) tAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGc > 1:224583/1‑124 (MQ=255) tAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCa > 1:224728/1‑125 (MQ=255) tAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCa > 2:224521/1‑125 (MQ=255) aaTGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCAc > 2:224371/1‑125 (MQ=255) aaTGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCAc < 2:224322/125‑1 (MQ=255) tGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTg > 2:224509/1‑125 (MQ=255) gATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGt > 2:224382/1‑125 (MQ=255) aTTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTa > 2:224646/1‑125 (MQ=255) tttATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAg > 1:224592/1‑125 (MQ=255) ttATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAgg < 1:224324/125‑1 (MQ=255) tataAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTa > 1:224527/1‑122 (MQ=255) tataAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGa > 2:224636/1‑125 (MQ=255) ataAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAg < 1:224327/125‑1 (MQ=255) taAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGc > 2:224627/1‑125 (MQ=255) aaTTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCggg < 1:224329/125‑1 (MQ=255) aaTTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGAACTGTGCACTGTAGGAGCgg > 2:224795/1‑124 (MQ=255) tttttATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGtt > 1:224536/1‑125 (MQ=255) ttttATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGttt < 1:224331/125‑1 (MQ=255) ttttATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGttt < 2:224332/125‑1 (MQ=255) tttATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGtt > 1:224497/1‑123 (MQ=255) tATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGT‑A‑AGCCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTAcc < 2:224336/125‑1 (MQ=255) aTGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCGAGATCTGTGCACTGTAGGAGCGGGTTTAccc > 1:224580/1‑125 (MQ=255) aTGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCtg < 2:224338/101‑1 (MQ=255) aTGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTAccc < 1:224339/125‑1 (MQ=255) tGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTAccc > 1:224585/1‑124 (MQ=255) tGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCcg > 1:224848/1‑125 (MQ=255) aactaactTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCcgcg > 2:224569/1‑125 (MQ=255) actaactTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGT‑ACA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGa < 1:224343/125‑1 (MQ=255) ctaactTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGaa > 1:224524/1‑125 (MQ=255) aactTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCcgc > 1:224397/1‑120 (MQ=255) aactTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAg < 2:224345/125‑1 (MQ=255) actTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAgg < 1:224346/125‑1 (MQ=255) tttGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCg > 1:224514/1‑125 (MQ=255) ttGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCgg < 2:224349/125‑1 (MQ=255) tGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGa < 1:224350/99‑1 (MQ=255) ggAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGaa < 2:224352/125‑1 (MQ=255) gAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAAc > 2:224537/1‑125 (MQ=255) aaTATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAAc > 1:224596/1‑124 (MQ=255) aaTATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACa > 1:224708/1‑125 (MQ=255) aaTATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGT‑A‑ACCCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACa < 2:224354/125‑1 (MQ=255) tatTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCCAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAg > 1:224616/1‑113 (MQ=255) tatTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAgg > 1:224555/1‑125 (MQ=255) atTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACa > 2:224544/1‑122 (MQ=255) tttATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGtt > 1:224560/1‑125 (MQ=255) tttATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCCCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGtt < 2:224358/125‑1 (MQ=255) taGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCAGCTACTACACACATACCTCAAGCTCTGTGCACTGTAGGAGCGGGTTTACCGGCGAGAGGGCCGGAACAGGTTTAc > 1:224531/1‑124 (MQ=38) taGAAGAGGGATTTGTTAAAGAGAAACCGAGCTCTTCGCGGGT‑ACA‑CCCGCACCTACACACAAGCCTCAAGATCTGTGCACTGTAGGAGCGGGTATACCCGCAAAAGGGCCGGAACAGGTTTACt < 2:224360/125‑1 (MQ=255) gAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTcc > 2:224770/1‑124 (MQ=255) gAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCg > 1:224623/1‑125 (MQ=255) aaGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCgg > 1:224647/1‑125 (MQ=255) aaGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCgg > 1:224659/1‑125 (MQ=255) gATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGTCGGAACAGGTTTACTCCGAGGCCg > 1:224619/1‑125 (MQ=255) gATTTGTTACAGAGGTGCCGAGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACTCATGCCTCAAGATATGTGCa < 2:224364/71‑1 (MQ=25) aTTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGc > 2:224687/1‑125 (MQ=255) tttGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAACGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCa < 1:224366/125‑1 (MQ=255) ttGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAg > 2:224676/1‑125 (MQ=255) ttGTTACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAg < 2:224367/125‑1 (MQ=255) ttACAGAGGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTcc > 1:224812/1‑125 (MQ=255) gagGTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAgg < 1:224372/125‑1 (MQ=255) gTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACATGCTTACTCGGAGGCCGCAGTCCCGAGGAAc < 2:224377/125‑1 (MQ=255) gTGCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGATTACTCGGAGGCCGCAGTCCCGAGGAAc < 1:224376/125‑1 (MQ=255) gCCGGGCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACtt < 1:224379/125‑1 (MQ=255) gggCTCTTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTgcg > 1:224577/1‑125 (MQ=255) ctctTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCaa < 1:224382/125‑1 (MQ=255) tctTCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAg > 1:225001/1‑125 (MQ=255) tCGCGGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAAc > 2:224690/1‑125 (MQ=255) cgcgGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAAc < 1:224386/124‑1 (MQ=255) cgcgGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGCGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGGGGAACTTGCGCAAGAAc < 2:224385/124‑1 (MQ=255) cgGGTAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGc < 2:224391/125‑1 (MQ=255) | AGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGT‑A‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGC > NC_002947/278618‑278861 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |