Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_002947 2,328,228 T→C E34G (GAG→GGG)  PP_2046 ← LysR family transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,328,2280TC99.4% 250.5 / ‑6.1 179E34G (GAG→GGG) PP_2046LysR family transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (72/106);  total (73/106)
Fisher's exact test for biased strand distribution p-value = 4.08e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01

Only 100 of 179 total aligned reads displayed.

CCAAGGCCCGTGGCGTCGGGCGCATGCGCCGGCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCATACGAAATGGAAATTTCAAA  >  NC_002947/2328109‑2328347
                                                                                                                       |                                                                                                                       
ccAAGGCCCGTGGCGTCGGGCGCATGCGCCGGCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCg                                                                                                                       <  2:1812312/122‑1 (MQ=255)
  aaGGCCCGTGGCGTCGGGCGCATGCGCCGGCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCgg                                                                                                                      >  2:1812588/1‑121 (MQ=255)
     gCCCGTGGCGTCGGGCGCATGCGCCGGCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGcc                                                                                                                 <  1:1812318/123‑1 (MQ=255)
     gCCCGTGGCGTCGGGCGCATGCGCCGGCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGcc                                                                                                                 <  1:1812317/123‑1 (MQ=255)
          tGGCGTCGGGCGCATGCGCCGGCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCgg                                                                                                              >  2:1812654/1‑121 (MQ=255)
          tGGCGTCGGGCGCATGCGCCGGCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGa                                                                                                            >  2:1812320/1‑123 (MQ=255)
          tGGCGTCGGGCGCATGCGCCGGCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGa                                                                                                            >  1:1812466/1‑123 (MQ=255)
            gCGTCGGGCGCATGCGCCGGCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATa                                                                                                          <  1:1812320/123‑1 (MQ=255)
              gTCGGGCGCATGCGCCGGCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATa                                                                                                          <  2:1812322/121‑1 (MQ=255)
               tCGGGCGCATGCGCCGGCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCGCGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCgg                                                                                                              >  1:1812605/1‑116 (MQ=255)
               tCGGGCGCATGCGCCGGCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACAtt                                                                                                      >  2:1812558/1‑124 (MQ=255)
                  ggCGCATGCGCCGGCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCt                                                                                                    >  2:1812554/1‑123 (MQ=255)
                   gcgcATGCGCCGGCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGt                                                                                                  <  2:1812325/124‑1 (MQ=255)
                    cgcATGCGCCGGCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGtt                                                                                                 <  1:1812326/124‑1 (MQ=255)
                      cATGCGCCGGCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCa                                                                                               >  2:1812583/1‑124 (MQ=255)
                        tGCGCCGGCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCAc                                                                                              <  2:1812328/123‑1 (MQ=255)
                         gcgcCGGCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTc                                                                                                     <  2:1812329/115‑1 (MQ=255)
                          cgcCGGCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACg                                                                                             >  1:1812484/1‑122 (MQ=255)
                           gcCGGCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTc                                                                                                     <  2:1812331/113‑1 (MQ=255)
                            ccGGCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACgcag                                                                                          >  1:1813017/1‑123 (MQ=255)
                              ggCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCaa                                                                                       >  1:1812612/1‑124 (MQ=255)
                              ggCCCACGCGGACCAGCAGCGAGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTATGTTCACgcag                                                                                          >  1:1812582/1‑121 (MQ=255)
                               gCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGGTACATTCTGTTCACGCAGCaa                                                                                       >  2:1812517/1‑123 (MQ=255)
                               gCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACgcagc                                                                                         >  1:1812542/1‑121 (MQ=255)
                               gCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAAc                                                                                      >  2:1812637/1‑124 (MQ=255)
                                  cACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACAt                                                                                    >  1:1812674/1‑123 (MQ=255)
                                  cACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATg                                                                                   <  2:1812335/124‑1 (MQ=255)
                                  cACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCAGGCTGCGCGGGATACATTCTGTTCACGCAGCAACATg                                                                                   <  1:1812334/124‑1 (MQ=255)
                                   aCGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGt                                                                                  <  1:1812336/124‑1 (MQ=255)
                                        gACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGCCGGCTGGGTCAGGGCCAGACGCCCGCCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTc                                                                                 >  2:1812569/1‑120 (MQ=255)
                                         aCCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGa                                                                            >  1:1812553/1‑124 (MQ=255)
                                         aCCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGa                                                                            <  2:1812339/124‑1 (MQ=255)
                                            agcagcGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGAcgc                                                                         <  2:1812342/124‑1 (MQ=255)
                                            agcagcGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGAcgc                                                                         >  2:1812573/1‑124 (MQ=255)
                                            agcagcGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGAcgc                                                                         <  2:1812341/124‑1 (MQ=255)
                                             gcagcGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGAcgc                                                                         >  1:1812772/1‑123 (MQ=255)
                                                gcGGGTCACCCAGCTGGTCACGCAGGCGCGCGAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGACGAAGACGCgca                                                                      <  1:1812345/123‑1 (MQ=255)
                                                 cGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCgcagc                                                                    <  2:1812347/124‑1 (MQ=255)
                                                    gTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAgg                                                                 <  1:1812348/124‑1 (MQ=255)
                                                     tCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGt                                                                <  2:1812350/124‑1 (MQ=255)
                                                         ccAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAg                                                            <  2:1812352/124‑1 (MQ=255)
                                                          cAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAg                                                            >  2:1812745/1‑123 (MQ=255)
                                                           aGCGGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGt                                                          <  2:1812354/124‑1 (MQ=255)
                                                             cTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCgcagc                                                                    <  2:1812355/112‑1 (MQ=255)
                                                             cTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCg                                                        <  2:1812358/124‑1 (MQ=255)
                                                                gTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGCAGACGCGCAGCAGGCTCAGGTCGaa                                                      >  1:1812653/1‑123 (MQ=255)
                                                                     gCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCgg                                                <  1:1812359/124‑2 (MQ=255)
                                                                      cAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGt                                                                                  <  2:1812362/89‑1 (MQ=255)
                                                                      cAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGaa                                               >  2:1812578/1‑124 (MQ=255)
                                                                       aGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGaaa                                              <  1:1812363/124‑1 (MQ=255)
                                                                        ggCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGaaa                                              <  1:1812365/123‑1 (MQ=255)
                                                                         gcgcgcCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACGTGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAata                                            <  2:1812366/124‑1 (MQ=255)
                                                                          cgcgcCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAatat                                           <  2:1812367/124‑1 (MQ=255)
                                                                          cgcgcCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAatat                                           <  1:1812370/124‑1 (MQ=255)
                                                                           gcgcCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATAtt                                          <  2:1812371/124‑1 (MQ=255)
                                                                            cgcCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCgcagc                                                                    >  2:1812845/1‑97 (MQ=255)
                                                                              ccAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCCGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCAt                                       >  2:1812631/1‑124 (MQ=255)
                                                                              ccAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAat                                             <  1:1812374/118‑1 (MQ=255)
                                                                              ccAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAat                                             >  2:1812374/1‑118 (MQ=255)
                                                                               cAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCAt                                       <  2:1812376/123‑1 (MQ=255)
                                                                                aGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGc                                     <  1:1812378/124‑1 (MQ=255)
                                                                                 gggCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAat                                             <  2:1812381/115‑1 (MQ=255)
                                                                                 gggCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCt                                    >  1:1812599/1‑124 (MQ=255)
                                                                                  ggCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGc                                     <  2:1812384/122‑1 (MQ=255)
                                                                                  ggCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCt                                    <  2:1812382/123‑1 (MQ=255)
                                                                                   gCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGa                                  >  1:1812627/1‑124 (MQ=255)
                                                                                   gCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGa                                  <  1:1812385/124‑1 (MQ=255)
                                                                                   gCATTGCTCACGGGCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATg                                      >  1:1812752/1‑120 (MQ=255)
                                                                                    cATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGaa                                 >  2:1812577/1‑124 (MQ=255)
                                                                                    cATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGaa                                 <  1:1812386/124‑1 (MQ=255)
                                                                                        gCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGtt                                                                                                 <  2:1812392/56‑1 (MQ=255)
                                                                                        gCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAata                             <  1:1812391/124‑1 (MQ=255)
                                                                                        gCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAata                             <  2:1812389/124‑1 (MQ=255)
                                                                                        gCTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAata                             >  2:1812694/1‑124 (MQ=255)
                                                                                         cTCACGGTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAatat                            <  1:1812395/124‑1 (MQ=255)
                                                                                          tCACGGTCGGCTGGGTCAGGGCAAGACGCCCGGCTGCCCGGGATACAGTCTGTTCACGCAGAAACAAGCCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAatata                           <  2:1812397/124‑1 (MQ=255)
                                                                                           cACGGGCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGc                                     <  2:1812398/113‑1 (MQ=255)
                                                                                              ggTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATgg                        <  1:1812399/123‑1 (MQ=255)
                                                                                              ggTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATgg                        <  1:1812402/123‑1 (MQ=255)
                                                                                               gTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCa                      <  1:1812403/124‑1 (MQ=255)
                                                                                               gTCGGCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCa                      <  2:1812404/124‑1 (MQ=255)
                                                                                                  ggCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGTAATATTCATGCTGAAAATATATGGc                       >  2:1812532/1‑120 (MQ=255)
                                                                                                  ggCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCATa                    <  2:1812407/123‑1 (MQ=255)
                                                                                                  ggCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCATAc                   >  2:1812594/1‑124 (MQ=255)
                                                                                                   gCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGCAGACGCGCAGCAGGTTCAGGTCGAAGTGCGAAATATTCATGCTGAAAATATATGGCATa                    >  2:1812710/1‑122 (MQ=255)
                                                                                                   gCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCATa                    >  2:1812679/1‑122 (MQ=255)
                                                                                                   gCTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCATACg                  >  1:1812525/1‑124 (MQ=255)
                                                                                                   gCTGGGGCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCATACg                  <  1:1812408/124‑1 (MQ=255)
                                                                                                    cTGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCATACg                  >  1:1812642/1‑123 (MQ=255)
                                                                                                     tGGGTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCATACGaa                <  1:1812410/124‑1 (MQ=255)
                                                                                                        gTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCATAc                   >  1:1812591/1‑118 (MQ=255)
                                                                                                        gTCAGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCATACGAAATg             <  2:1812413/124‑1 (MQ=255)
                                                                                                           aGGGCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCATACGAAATGGaa          <  1:1812415/124‑1 (MQ=255)
                                                                                                            gggCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCATACGAAATGGa           >  1:1812630/1‑122 (MQ=255)
                                                                                                             ggCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCATACGAAATGGaaa         >  2:1812672/1‑123 (MQ=255)
                                                                                                             ggCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCATACGAAATGGaaa         <  1:1812416/123‑1 (MQ=255)
                                                                                                              gCCAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCATACGAAATGGAAAtt       <  2:1812417/124‑1 (MQ=255)
                                                                                                                cAGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCATACGAAATGGAAATTTc     <  2:1812418/124‑1 (MQ=255)
                                                                                                                 aGACGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCATACGAAATGGAAATTTCa    >  2:1812690/1‑124 (MQ=255)
                                                                                                                   aCGCCCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCATACGAAATGGAAATTTCaaa  <  2:1812421/124‑1 (MQ=255)
                                                                                                                       |                                                                                                                       
CCAAGGCCCGTGGCGTCGGGCGCATGCGCCGGCCCACGCGGACCAGCAGCGGGTCACCCAGCTGGTCACGCAGGCGCGCCAGGGCATTGCTCACGGTCGGCTGGGTCAGGGCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCATACGAAATGGAAATTTCAAA  >  NC_002947/2328109‑2328347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑