Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_002947 5453067–5453713 5454653–5453991 279–1587 129 [127] [125] 130 [PP_4791] [PP_4791]

Only 100 of 129 total aligned reads displayed.

GCTGGGCTGGGCGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCC  >  NC_002947/5452942‑5453127
                                                                                                                            |                                                             
gctgggctggGCGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACgg                                                               <  2:5407495/125‑1 (MQ=255)
 ctgggctgggCGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGc                                                              >  1:5407710/1‑125 (MQ=255)
  tgggctgggcGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGc                                                              <  2:5407496/124‑1 (MQ=255)
  tgggctgggcGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGc                                                              <  2:5407497/124‑1 (MQ=255)
  tgggctgggcGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCt                                                             <  1:5407498/125‑1 (MQ=255)
  tgggctgggcGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCt                                                             >  1:5407645/1‑125 (MQ=255)
   gggctgggcGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCtt                                                            <  2:5407500/125‑1 (MQ=255)
    ggctgggcGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCt                                                             >  1:5407773/1‑123 (MQ=255)
    ggctgggcGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTc                                                           <  2:5407501/125‑1 (MQ=255)
    ggctgggcGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTc                                                           <  2:5407502/125‑1 (MQ=255)
     gctgggcGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCa                                                          >  1:5407841/1‑125 (MQ=255)
       tgggcGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGt                                                        >  2:5407641/1‑125 (MQ=255)
       tgggcGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGt                                                        <  2:5407504/125‑1 (MQ=255)
        gggcGTTGCTTGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCGGt                                                        >  1:5407580/1‑124 (MQ=255)
        gggcGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGtt                                                       >  1:5407787/1‑125 (MQ=255)
         ggcGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTc                                                      >  2:5407847/1‑125 (MQ=255)
         ggcGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTc                                                      <  1:5407506/125‑1 (MQ=255)
         ggcGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCACATCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTc                                                      <  1:5407505/125‑1 (MQ=255)
          gcGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTcc                                                     <  1:5407507/125‑1 (MQ=255)
            gTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTc                                                      >  2:5407739/1‑122 (MQ=255)
            gTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCg                                                    <  2:5407511/124‑1 (MQ=255)
            gTTGCGGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGc                                                   <  1:5407510/125‑1 (MQ=255)
             ttGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACTTGAGGTGTACGGCTTCAGTTCCGc                                                   >  1:5407815/1‑124 (MQ=255)
             ttGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTcc                                                     >  1:5407849/1‑122 (MQ=255)
              tGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAg                                                 <  1:5407512/125‑1 (MQ=255)
                 tGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCACCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGa                                              <  2:5407513/125‑1 (MQ=255)
                  ggCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGa                                              <  1:5407514/124‑1 (MQ=255)
                   gCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACg                                            >  2:5407671/1‑125 (MQ=255)
                    cAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGc                                           <  1:5407516/125‑1 (MQ=255)
                     aGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCCGCGACGCt                                          >  1:5407707/1‑125 (MQ=255)
                     aGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGc                                           >  2:5407722/1‑124 (MQ=255)
                     aGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGc                                           <  1:5407518/124‑1 (MQ=255)
                     aGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCt                                          <  1:5407517/125‑1 (MQ=255)
                      gggCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTg                                         <  1:5407519/125‑1 (MQ=255)
                       ggCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCt                                          <  2:5407522/123‑1 (MQ=255)
                       ggCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGa                                        <  1:5407521/125‑1 (MQ=255)
                        gCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGAc                                       <  1:5407523/125‑1 (MQ=255)
                         cGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACa                                      <  1:5407524/125‑1 (MQ=255)
                         cGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACa                                      >  1:5407638/1‑125 (MQ=255)
                           tATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACAtt                                    >  1:5407793/1‑125 (MQ=255)
                           tATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACAtt                                    >  2:5407705/1‑125 (MQ=255)
                           tATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACAtt                                    >  2:5407765/1‑125 (MQ=255)
                           tATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACAtt                                    >  1:5407826/1‑125 (MQ=255)
                           tATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTACAGTTCCGCAGCGACGCTGACAtt                                    <  1:5407527/125‑1 (MQ=255)
                            aTTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACAttt                                   >  2:5407768/1‑125 (MQ=255)
                            aTTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACAttt                                   >  2:5407749/1‑125 (MQ=255)
                             ttGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGAc                                       >  2:5407829/1‑120 (MQ=255)
                             ttGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACAtttt                                  >  2:5407593/1‑125 (MQ=255)
                             ttGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACAttt                                   <  1:5407528/124‑1 (MQ=255)
                              tGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTg                                 <  1:5407529/125‑1 (MQ=255)
                              tGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTg                                 >  2:5407804/1‑125 (MQ=255)
                               gCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGa                                >  1:5407836/1‑125 (MQ=255)
                                cAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGaa                               >  1:5407842/1‑125 (MQ=255)
                                 aaaaaCCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGaaa                              >  2:5407776/1‑125 (MQ=255)
                                   aaaCCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGaaaaa                            >  2:5407683/1‑125 (MQ=255)
                                   aaaCCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGaaaaa                            <  1:5407531/125‑1 (MQ=255)
                                    aaCCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGaaaaa                            >  2:5407824/1‑124 (MQ=255)
                                    aaCCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAaaaag                           >  2:5407778/1‑125 (MQ=255)
                                    aaCCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTAAGGATTCAGTTCCGCAGCGACGCTGACATTTTGAaaaag                           >  1:5407803/1‑125 (MQ=255)
                                      ccGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAaaaagaa                         >  1:5407812/1‑125 (MQ=255)
                                       cGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAaaaagaaa                        >  2:5407788/1‑125 (MQ=255)
                                       cGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAaaaagaaa                        >  2:5407750/1‑125 (MQ=255)
                                        gTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAaaaagaaaa                       <  1:5407534/125‑1 (MQ=255)
                                        gTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAaaaagaaaa                       <  2:5407533/125‑1 (MQ=255)
                                        gTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAaaaagaaaa                       <  2:5407535/125‑1 (MQ=255)
                                         tCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAaaaagaaaag                      >  2:5407732/1‑125 (MQ=255)
                                         tCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAaaaagaaaa                       >  1:5407801/1‑124 (MQ=255)
                                         tCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAaaaagaaaa                       <  2:5407536/124‑1 (MQ=255)
                                         tCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGAGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGGaaacgaaaag                      >  1:5407818/1‑125 (MQ=255)
                                           tGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCTCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAaaaagaaaa                       <  2:5407538/122‑1 (MQ=255)
                                            gATTGACGATCCGCGACCAGTGTAGGAGGTCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGc                    <  2:5407539/124‑1 (MQ=255)
                                            gATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAaaaagaaaa                       <  1:5407540/121‑1 (MQ=255)
                                             aTTGACGATACGCGACCGCTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCgg                  >  1:5407702/1‑125 (MQ=255)
                                             aTTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCgg                  >  2:5407663/1‑125 (MQ=255)
                                             aTTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACAATTTGAaaaagaaaa                       >  2:5407789/1‑120 (MQ=255)
                                               tGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGtt                <  2:5407541/125‑1 (MQ=255)
                                               tGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGtt                >  1:5407715/1‑125 (MQ=255)
                                                gACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAaaaagaaaag                      <  2:5407543/118‑1 (MQ=255)
                                                gACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTg               <  1:5407542/125‑1 (MQ=255)
                                                gACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTg               >  1:5407742/1‑125 (MQ=255)
                                                 accaTACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCgg                  >  2:5407775/4‑121 (MQ=255)
                                                 aCGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACa                                      >  1:5407796/1‑101 (MQ=255)
                                                 aCGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTgg              >  2:5407622/1‑125 (MQ=255)
                                                   gATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTTGCGCAGCAAATATGAGGTGTACGGCTTCAGATCCGCAGCGACGCTGACATTTTGaaaaa                            >  2:5407851/1‑109 (MQ=255)
                                                    aTACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGccc           >  1:5407809/1‑125 (MQ=40)
                                                    aTACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGccc           >  1:5407751/1‑125 (MQ=40)
                                                     tACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCCGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCg          >  1:5407811/1‑125 (MQ=255)
                                                      aCGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCgg         >  1:5407835/1‑125 (MQ=38)
                                                      aCGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCgg         <  1:5407545/125‑1 (MQ=38)
                                                       cgcgACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGcc            <  1:5407546/121‑1 (MQ=37)
                                                         cgACCACTGTTGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTa       >  2:5407820/1‑124 (MQ=25)
                                                         cgACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGt        >  2:5407828/1‑123 (MQ=35)
                                                          gACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAgg     >  2:5407837/1‑125 (MQ=34)
                                                           aCCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACGGTGTGAAAAAGAAAAGGCGGTTGGcc            >  1:5407745/1‑117 (MQ=255)
                                                           aCCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAggg    >  1:5407844/1‑125 (MQ=33)
                                                           aCCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAggg    >  1:5407800/1‑125 (MQ=33)
                                                            ccACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAggg    >  1:5407816/1‑124 (MQ=32)
                                                            ccACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTAGCCCGGTAGGGc   >  1:5407834/1‑125 (MQ=17)
                                                             cACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGcc  <  1:5407549/125‑1 (MQ=31)
                                                             cACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGcc  <  1:5407548/125‑1 (MQ=31)
                                                                                                                            |                                                             
GCTGGGCTGGGCGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCC  >  NC_002947/5452942‑5453127

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑