BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	5,674,753	G→C	intergenic (+115/+25)	rhlE‑II → / ← yceI	ATP‑dependent RNA helicase/polyisoprene‑binding acidic stress response factor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	5,674,753	0	G	C	100.0%	295.0 / NA	264	intergenic (+115/+25)	rhlE‑II/yceI	ATP‑dependent RNA helicase/polyisoprene‑binding acidic stress response factor
Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (110/154); total (110/154)

Only 100 of 264 total aligned reads displayed.

TGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGC‑G‑‑CGCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTT  >  NC_002947/5674636‑5674867

tGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCg                                                                                                              >  2:5330692/1‑125 (MQ=255)

 gATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCgg                                                                                                             <  2:5330503/125‑1 (MQ=255)

  aTAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGt                                                                                                            <  1:5330504/125‑1 (MQ=255)

   tAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGtt                                                                                                           >  1:5331159/1‑125 (MQ=255)

    aGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGttt                                                                                                          <  2:5330508/125‑1 (MQ=255)

     gAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGtttt                                                                                                         <  1:5330511/125‑1 (MQ=255)

     gAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGtttt                                                                                                         <  2:5330510/125‑1 (MQ=255)

       aGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGATTTc                                                                                                        >  2:5330807/1‑124 (MQ=255)

         tACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGc                                                                                                     <  1:5330515/125‑1 (MQ=255)

           ccGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCt                                                                                                    <  2:5330518/124‑1 (MQ=255)

           ccGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTg                                                                                                   >  2:5330843/1‑125 (MQ=255)

           ccGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTg                                                                                                   >  1:5330939/1‑125 (MQ=255)

            cGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTgg                                                                                                  >  1:5330932/1‑125 (MQ=255)

             gAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTgg                                                                                                  <  1:5330521/124‑1 (MQ=255)

             gAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTg                                                                                                   >  2:5330840/1‑123 (MQ=255)

              aGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCa                                                                                                >  2:5331089/1‑125 (MQ=255)

               gggggCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGATCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGtttt                                                                                                         <  1:5330524/115‑1 (MQ=25)

                ggggCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGa                                                                                              >  1:5330789/1‑125 (MQ=255)

                  ggCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGaaa                                                                                            >  1:5330877/1‑125 (MQ=255)

                    ctgctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAAtt                                                                                          <  1:5330527/125‑1 (MQ=255)

                     tgctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAAtt                                                                                          <  2:5330528/124‑1 (MQ=255)

                     tgctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGCTTTCAGCTGGCAGAAAtt                                                                                          >  1:5330810/1‑124 (MQ=255)

                      gctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTAc                                                                                        <  2:5330531/125‑1 (MQ=255)

                       ctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCt                                                                                                    >  2:5330759/1‑112 (MQ=255)

                         tCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACtt                                                                                      <  2:5330537/124‑1 (MQ=255)

                         tCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTc                                                                                     <  1:5330533/125‑1 (MQ=255)

                          cGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCt                                                                                    <  1:5330539/125‑1 (MQ=255)

                           gCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTg                                                                                   <  2:5330540/125‑1 (MQ=255)

                           gCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTg                                                                                   >  1:5330826/1‑125 (MQ=255)

                            cAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTg                                                                                   >  2:5331004/1‑124 (MQ=255)

                            cAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGc                                                                                  >  2:5331160/1‑125 (MQ=255)

                             aGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCt                                                                                 >  1:5330736/1‑125 (MQ=255)

                             aGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCt                                                                                 >  1:5330684/1‑125 (MQ=255)

                              gCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCtt                                                                                >  1:5330990/1‑125 (MQ=255)

                               cccTATCACGACACAAGGCCGCTCCTGCATAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTc                                                                               <  1:5330543/125‑1 (MQ=255)

                               cccTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCtt                                                                                <  1:5330545/124‑1 (MQ=255)

                                  tATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTcaca                                                                            <  2:5330549/125‑1 (MQ=255)

                                  tATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTcac                                                                             >  1:5330915/1‑124 (MQ=255)

                                    tCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACAcc                                                                          >  2:5330795/1‑125 (MQ=255)

                                      aCGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCtt                                                                        <  1:5330553/125‑1 (MQ=255)

                                      aCGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCtt                                                                        <  2:5330554/125‑1 (MQ=255)

                                      aCGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCtt                                                                        <  2:5330558/125‑1 (MQ=255)

                                       cGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCtt                                                                        <  2:5330561/124‑1 (MQ=255)

                                       cGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTc                                                                       >  1:5330890/1‑125 (MQ=255)

                                        gACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCg                                                                      >  2:5330834/1‑125 (MQ=255)

                                         acacAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCt                                                                         <  2:5330565/121‑1 (MQ=255)

                                         acacAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGa                                                                     <  1:5330564/125‑1 (MQ=255)

                                          cacaAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGac                                                                    >  2:5330783/1‑125 (MQ=255)

                                             aaGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACt                                                                 <  2:5330568/125‑1 (MQ=255)

                                              aGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTg                                                                                   <  2:5330572/106‑1 (MQ=255)

                                              aGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTg                                                                <  1:5330571/125‑1 (MQ=255)

                                              aGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTg                                                                >  1:5330764/1‑125 (MQ=255)

                                                 ccGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGata                                                             <  1:5330577/125‑1 (MQ=255)

                                                  cGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTGACACCTTCGACACTGatat                                                            <  2:5330578/125‑1 (MQ=38)

                                                  cGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACt                                                                 <  2:5330580/120‑1 (MQ=255)

                                                   gCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGtttt                                                                                                         <  1:5330583/79‑1 (MQ=21)

                                                   gCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtc                                                           >  2:5330922/1‑125 (MQ=255)

                                                    cTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtcc                                                          >  2:5330892/1‑125 (MQ=255)

                                                     tCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtcca                                                         <  1:5330586/125‑1 (MQ=255)

                                                      ccTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTgg                                                                                                  <  2:5330589/83‑1 (MQ=25)

                                                       cTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccagg                                                       >  2:5330957/1‑125 (MQ=255)

                                                        tGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAATCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggt                                                      <  2:5330592/125‑1 (MQ=38)

                                                         gCAGAGGATTTCTTGATCTCTACAGGAGCGGCCTTGTGTTGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggt                                                      <  1:5330595/124‑1 (MQ=39)

                                                           agagAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggtcca                                                   >  1:5330822/1‑125 (MQ=255)

                                                           agagAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggtcca                                                   <  2:5330598/125‑1 (MQ=255)

                                                           agagAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggtcca                                                   <  1:5330597/125‑1 (MQ=255)

                                                            gagaATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggtccag                                                  <  2:5330601/125‑1 (MQ=255)

                                                             agaATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggtccagg                                                 >  2:5330724/1‑125 (MQ=255)

                                                               aaTTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggtccagg                                                 >  1:5331028/1‑123 (MQ=255)

                                                               aaTTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGt                                               <  2:5330605/125‑1 (MQ=255)

                                                                aTTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTc                                              <  1:5330610/125‑1 (MQ=255)

                                                                aTTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTc                                              <  1:5330607/125‑1 (MQ=255)

                                                                  ttCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCt                                             <  2:5330612/124‑1 (MQ=255)

                                                                   tCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTTATATCCAGGTCCAGGGTCTGc                                           >  2:5331057/1‑125 (MQ=255)

                                                                   tCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGc                                           <  1:5330614/125‑1 (MQ=255)

                                                                    cTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCg                                          <  2:5330617/125‑1 (MQ=255)

                                                                       gATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAg                                       >  2:5330908/1‑125 (MQ=255)

                                                                        aTCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGt                                      <  2:5330619/125‑1 (MQ=255)

                                                                          ctctACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAg                                    >  1:5330867/1‑125 (MQ=255)

                                                                              aCAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCAcc                                <  2:5330623/125‑1 (MQ=255)

                                                                               cAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCAccc                               <  1:5330626/125‑1 (MQ=255)

                                                                                aGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCg                              >  1:5330946/1‑125 (MQ=255)

                                                                                  gAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCAcc                                >  1:5330909/1‑121 (MQ=255)

                                                                                    gCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCg                              <  2:5330631/121‑1 (MQ=255)

                                                                                    gCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGcc                          <  2:5330629/125‑1 (MQ=255)

                                                                                     cGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCt                         <  1:5330633/125‑1 (MQ=255)

                                                                                     cGGCCTTGTGTCGTGATAGGGCCGCAAAGC‑GGCCCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGcc                          >  2:5330876/1‑125 (MQ=255)

                                                                                      ggCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCtt                        <  2:5330637/125‑1 (MQ=255)

                                                                                       gCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACATTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCttt                       <  1:5330638/125‑1 (MQ=255)

                                                                                         cTTGTGTCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCtt                        <  2:5330641/122‑1 (MQ=255)

                                                                                               tCGTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGa               >  2:5330817/1‑125 (MQ=255)

                                                                                                 gTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAg             <  2:5330647/125‑1 (MQ=255)

                                                                                                 gTGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAg             <  2:5330644/125‑1 (MQ=255)

                                                                                                  tGATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGt            >  1:5331102/1‑125 (MQ=255)

                                                                                                   gATAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTc           <  2:5330649/125‑1 (MQ=255)

                                                                                                     tAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgt         <  1:5330650/125‑1 (MQ=255)

                                                                                                     tAGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgt         >  1:5330969/1‑125 (MQ=255)

                                                                                                      aGGGCCGCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt        >  2:5330963/1‑125 (MQ=255)

                                                                                                            gCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGTAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgttcaggtt  <  1:5330656/125‑1 (MQ=255)

                                                                                                            gCAAAGCGG‑‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgttcaggtt  <  2:5330655/125‑1 (MQ=255)

TGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGC‑G‑‑CGCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTT  >  NC_002947/5674636‑5674867

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`