| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 4,586,030 | 2 bp→TC | intergenic (+113/+101) | PP_4061 → / ← PP_4063 | hypothetical protein/long‑chain fatty acid‑‑CoA ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,586,030 | 0 | C | T | 99.3% | 337.9 / NA | 138 | intergenic (+113/+102) | PP_4061/PP_4063 | hypothetical protein/long‑chain fatty acid‑‑CoA ligase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (83/54); minor base A (0/1); total (83/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
| * | NC_002947 | 4,586,031 | 0 | T | C | 100.0% | 147.2 / NA | 138 | intergenic (+114/+101) | PP_4061/PP_4063 | hypothetical protein/long‑chain fatty acid‑‑CoA ligase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (83/55); total (83/55) | |||||||||||
Only 100 of 138 total aligned reads displayed.
GCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTCTGC‑G‑G‑TAAACCCGCTCCTACCAGGGA‑C‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGCAGATG > NC_002947/4585912‑4586145 || gCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGC‑g‑gg < 1:4244078/125‑2 (MQ=255)gCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGC‑g‑gg < 2:4244076/125‑2 (MQ=255)gCTTAAGGGTAGACCACGGCACCCGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGC‑g‑gg < 2:4244079/125‑2 (MQ=255) cTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGC‑g‑gg > 1:4244209/1‑123 (MQ=255) tAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGC‑g‑gg > 2:4244175/1‑121 (MQ=255) aaGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGC‑g‑ggtaaa > 2:4244180/1‑120 (MQ=255) aGGGTAGACCACGGCGCCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAAc < 2:4244082/125‑1 (MQ=255) aGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAAc < 1:4244080/125‑1 (MQ=255) aGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGC‑g‑ggtaaa < 1:4244081/124‑6 (MQ=255) gggTAGACCACGGCACCGGCGTGAAGAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAAcc > 1:4244275/1‑125 (MQ=255) gggTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAAcc > 2:4244177/1‑125 (MQ=255) gggTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAAcc > 2:4244267/1‑125 (MQ=255) gggTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAAcc > 2:4244142/1‑125 (MQ=255) tAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGc > 2:4244270/1‑125 (MQ=255) gACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTc > 1:4244231/1‑125 (MQ=255) gACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTc > 2:4244223/1‑125 (MQ=255) aCCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTcc < 2:4244085/125‑1 (MQ=255) aCCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTcc > 1:4244181/1‑125 (MQ=255) aCGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTa < 2:4244086/124‑1 (MQ=255) aCGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTAc > 2:4244230/1‑125 (MQ=255) cGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTAcc > 2:4244271/1‑125 (MQ=255) cGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTAcc < 1:4244087/125‑1 (MQ=255) ggCACCGGCGTGAACAGCTGATCTGCGCTGCTCTATTGAAAGGTTGAGGATGACCGTGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTACGCGG‑G‑TAAACCCGCTCCTATCa < 2:4244088/125‑1 (MQ=255) gCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTAcc > 2:4244283/1‑123 (MQ=255) gCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAg < 1:4244089/125‑1 (MQ=255) ccGGCGTGAACAGCTGATCTGCGCTGTTACATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTGTTCGCGG‑G‑TAAACCCGCTCCTAcc > 1:4244242/1‑120 (MQ=38) cGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGA‑c < 1:4244091/125‑1 (MQ=255) gTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGA‑ccgtg > 1:4244334/1‑121 (MQ=38) gTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGA‑ccgtg < 1:4244093/125‑5 (MQ=38) gTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGA‑ccgtg > 1:4244182/1‑121 (MQ=38) gTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGA‑ccgt < 1:4244094/124‑4 (MQ=38) tGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGA‑ccgtgc > 1:4244323/1‑120 (MQ=38) tGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGA‑ccgtgc > 1:4244297/1‑120 (MQ=38) tGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGA‑ccgtgc < 2:4244095/125‑6 (MQ=38) tGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGA‑ccgtgc > 2:4244158/1‑120 (MQ=38) tGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGC‑GAG‑TAAACCCtctc > 1:4244440/1‑109 (MQ=255) aaCAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGCGACC‑GTGcc > 1:4244185/1‑124 (MQ=38) aGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGcc < 2:4244098/125‑1 (MQ=38) aGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGcc < 2:4244097/125‑1 (MQ=38) gATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGa < 1:4244099/125‑1 (MQ=38) aTCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGaa < 1:4244100/125‑1 (MQ=38) cTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAAc > 1:4244460/1‑91 (MQ=39) cgcTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATgcgg > 1:4244149/1‑125 (MQ=38) gctgctCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑TTGCCGGCCTTGAATgcgg > 2:4244246/1‑124 (MQ=37) ctgctCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATgc > 1:4244308/1‑121 (MQ=38) tgctCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGgcgc > 1:4244215/1‑125 (MQ=38) aTTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGa < 2:4244103/95‑1 (MQ=37) aTTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGcccc < 1:4244102/125‑1 (MQ=38) ttGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCt > 1:4244291/1‑125 (MQ=38) gAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTgg > 1:4244284/1‑125 (MQ=38) gAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTgg > 1:4244329/1‑125 (MQ=38) gAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTg > 2:4244333/1‑124 (MQ=38) aaaGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGt > 1:4244272/1‑125 (MQ=38) aaGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTg > 2:4244261/1‑122 (MQ=38) aaGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTa > 1:4244194/1‑125 (MQ=38) aaGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTa < 2:4244105/125‑1 (MQ=38) aGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGAGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAg < 1:4244107/125‑1 (MQ=38) ggTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAgg < 2:4244108/125‑1 (MQ=38) ttGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACGCGCTc > 1:4244406/1‑76 (MQ=37) ttGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGCACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGt > 2:4244421/1‑120 (MQ=37) aGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCgg > 2:4244315/1‑125 (MQ=38) ggATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCggg < 1:4244109/125‑1 (MQ=38) ggATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCggg > 2:4244310/1‑125 (MQ=38) aTGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCATGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGtt < 1:4244110/125‑1 (MQ=37) tGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGtt < 2:4244111/124‑1 (MQ=37) gACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTa < 2:4244112/125‑1 (MQ=37) cGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTCCCGGcc > 1:4244296/1‑86 (MQ=21) gggTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGttt < 2:4244116/120‑1 (MQ=37) gggTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCcg < 1:4244115/125‑1 (MQ=37) ggTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCTCTCCTACCCGGGA‑CTGTGCCGGCCTTg > 1:4244381/1‑87 (MQ=21) cTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAg > 2:4244304/1‑108 (MQ=37) ttGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAaga < 1:4244117/125‑1 (MQ=37) tGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAaga < 2:4244118/124‑1 (MQ=37) gCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCGTACCCGGGACC‑GTGCCGGCCTTGGATGCGGCGCTGCCCCTGGTAGGAGCGGGTTAACCCGCGATAAggc > 2:4244380/1‑125 (MQ=25) cAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAggcc > 1:4244258/1‑125 (MQ=37) cAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAggcc > 2:4244263/1‑125 (MQ=37) aaGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAggcc > 2:4244371/1‑124 (MQ=37) aGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAggccgg < 1:4244120/125‑1 (MQ=37) aaGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCcgcg > 1:4244417/1‑125 (MQ=37) aGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCgcgc < 2:4244121/125‑1 (MQ=37) gATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCg > 1:4244401/1‑63 (MQ=14) gATCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGCATGCGGCGCTGCCCCTGGTAGGAGCgg > 2:4244500/1‑97 (MQ=25) aTCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCa > 1:4244262/1‑125 (MQ=37) aTCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCa > 1:4244247/1‑125 (MQ=25) aTCTTGCATTGATCGGGCCGGCCTCTTCGC‑G‑GCTAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGcccc > 2:4244506/1‑84 (MQ=21) tCTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAg < 1:4244123/125‑1 (MQ=37) cTTGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGc > 1:4244269/1‑125 (MQ=25) cTTGCATTGATCGGGCCGGCCTCTTCGC‑G‑GTTAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATgcggcg > 1:4244365/1‑75 (MQ=18) ttGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGca < 1:4244124/125‑1 (MQ=37) ttGCATTGATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCGCCTACCAGGGACC‑GTGCCGGCCTTCAATTCGGCGCTGCCCCTGGTACGCGCGGGTGTCCCCGCGGAGAGGCCGGCCGCGCCAGcc > 2:4244387/1‑124 (MQ=21) gATCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAAc < 1:4244126/125‑1 (MQ=25) aTCGGGCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGGTGCCCCTGGTAGGAGCGGGTTTACCcgcg > 2:4244320/1‑96 (MQ=21) gggCCGGCCTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGc > 1:4244311/1‑125 (MQ=37) ggccggccTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGc > 1:4244299/1‑124 (MQ=25) ggccggccTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGCa < 1:4244127/125‑1 (MQ=37) ggccggccTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCCGCGCTGCCCCTGGTAGGAGCGGGTTTACCcg > 2:4244306/1‑90 (MQ=18) ccggccTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGCAGa < 1:4244128/125‑1 (MQ=37) ggccTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGCAGa < 1:4244137/123‑1 (MQ=37) ggccTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGCAGATg > 2:4244280/1‑125 (MQ=37) ggccTCTTCGCGG‑G‑TAAACCCGCTCCTACCAGGGACC‑GTGCCGGCCTTGAATGCGGCGCTGACCCTTGTAGGAGCGGGTTTACCCGCGACGAGGCCGGCCGCGCCAGCACATCAACCCGCAGATg > 2:4244353/1‑125 (MQ=25) || GCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTCTGC‑G‑G‑TAAACCCGCTCCTACCAGGGA‑C‑GTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGCAGATG > NC_002947/4585912‑4586145 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |