| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1736181 | 44 (0.900) | 9 (0.240) | 9/200 | 3.4 | 20.2% | intergenic (‑103/+88) | dapE/PP_1526 | succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase |
| ? | NC_002947 | = 1736217 | 37 (0.970) | intergenic (‑139/+52) | dapE/PP_1526 | succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
GGGTGACCGAGGGGCGACGGATCAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1736006‑1736181‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccattcgcgggcacgcccgctcccacCGGCTTGGCACAGGCGTTCAGAGCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCGTGCTGCCCGAAACCATTTGATATAAGATAACGCCCCTCAGATTTCCCCGCCTTGCCTTGCCCCGGAGTCCCCCATGACGGC < NC_002947/1736217‑1736071 GGGTGACCGAGGGGCGACGGATCAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCCGGGCAATCTGAGGGGCGTTATCTTATATCAAATGGTTCAGGGCAGCAAGGC < 2:1021653/150‑1 GGTGACCGAGGGGCGACGGATCAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTTCGGGGCAAGGCAAGGTGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCC < 2:301168/150‑1 GGTGACCGAGGGGCGACGGATCAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCC < 1:1285500/150‑1 CGAGGGGCGACGGATCAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCG > 2:1171333/1‑150 AGGGGCGACGGATCAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCG < 1:653730/150‑1 CAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTC > 2:738996/1‑150 GGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTGTATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACCGGCTTGGCACAGGCGTTCAGAGCTGTGCAGTACCTGTGGGAGCGGGC < 1:1132669/150‑1 TCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACCGGCTTGGCACAGGCGTTCAGAGCTGTGCAGTACCTGTGG > 1:1152123/1‑97 TCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACCGGCTTGGCACAGGCGTTCAGAGCTGTGCAGTACCTGTGG < 2:1152123/97‑1 TATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACCGGCTTGGCACAGGCGTTCAGAGCTGTGCAGTACCTGTG < 2:982358/91‑1 TATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACCGGCTTGGCACAGGCGTTCAGAGCTGTGCAGTACCTGTG > 1:982358/1‑91 AAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACCGGCTTGGCACAGGCGTTCAGAGCTGTGCAGTACCTGTGGGA < 1:672135/90‑1 AAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACCGGCTTGGCACAGGCGTTCAGAGCTGTGCAGTACCTGTGGGA > 2:672135/1‑90 ACGGCCCATTCGCGGGCACGCCCGCTCCCACCGGCTTGGCACAGGCGTTCAGAGCTGTGCAGTACCTGTGGGAGCGG < 1:409379/77‑1 ACGGCCCATTCGCGGGCACGCCCGCTCCCACCGGCTTGGCACAGGCGTTCAGAGCTGTGCAGTACCTGTGGGAGCGG > 2:409379/1‑77 CCCATTCGCGGGCACGCCCGCTCCCACCGGCTTGGCACAGGCGTTCAGAGCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCGTGCTGCCCGAAACCATTTGATATAAGATAACGCCCCTCAGATTTCCCCGCCTTGCCT < 1:24518/150‑1 TTCGCGGGCACGCCCGCTCCCACCGGCTTGGCACAGG > 1:918485/1‑37 TTCGCGGGCACGCCCGCTCCCACCGGCTTGGCACAGG < 2:918485/37‑1 GCACGCCCGCTCCCACCGGCTTGGCACAGGCGTTCAGAGCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCGTGCTGCCCGAAACCATTTGATATAAGATAACGCCCCTCAGATTTCCCCGCCTTGCCTTGCCCCGGAGT > 1:574301/1‑150 ACGCCCGCTCCCACCGGCTTGGCACAGGCGTTCAGAGCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCGTGCTGCCCGAAACCATTTGATATAAGATAACGCCCCTCAGATTTCCCCGCCTTGCCTTGCCCCGGAGTCC > 2:1162832/1‑150 GCCCGCTCCCACCGGCTTGGCACAGGCGTTCAGAGCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCGTGCTGCCCGAAA > 2:1073895/1‑90 GCCCGCTCCCACCGGCTTGGCACAGGCGTTCAGAGCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCGTGCTGCCCGAAA < 1:1073895/90‑1 CGCTCCCACCGGCTTGGCACAGGCGTTCAGAGCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCGTGCTGCCCGAAACCATTTGATATAAGATAACGCCCCTCAGATTTCCCCGCCTTGCCTTGCCCCGGAGTCCCCCAT < 2:807510/150‑1 CCCACCGGCTTGGCACAGGCGTTTAGAGCTGTGCAGTATCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCGTGCTGCCCGAAACCATTTGATATAAGACAACGCCCCTCAGATTT‑CCCACCTTGCCTTGCCCCGGAGTCCCCCATGACGG < 2:851163/150‑1 CACCGGCTAGGCACAGGCGTTCAGAGCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCGTGCTGCCCGAAACCATTTGATATAAGATAACGCCCCTCAGATTTCCCCGCCTTGCCTTGCCCCGGAGTCCCCCATGACGGC > 1:356094/1‑150 GGGTGACCGAGGGGCGACGGATCAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1736006‑1736181‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccattcgcgggcacgcccgctcccacCGGCTTGGCACAGGCGTTCAGAGCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCGTGCTGCCCGAAACCATTTGATATAAGATAACGCCCCTCAGATTTCCCCGCCTTGCCTTGCCCCGGAGTCCCCCATGACGGC < NC_002947/1736217‑1736071 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |