New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1015841 = | 0 (0.000) | 9 (0.650) | 9/264 | 0.3 | 100% | intergenic (‑68/‑700) | SBRG_Ecoli_galE/prfC | SBRG_Ecoli_galE/peptide chain release factor 3 |
? | NC_002947 | 4541196 = | NA (NA) | intergenic (+730/‑85) | PP_4022/PP_4024 | hypothetical protein/transposase |
GTACCCTGCTGCTGTACCCCATCGACCTGGTACGCGCCAGCGGCGTGGCGCGCAGCATGAACTTCGTCAGCAACATCGCGGCGCTGACGGTTTTCATCATTTCCGGGCAGGTGGACTATATCGTTGTAAGGGATCCATCATCCCCACATTCCAACCGTCCACCTGATTCCCGATGCTGTGCTCCCGATTTCTTTCTGGAGCCAGCCCGCCATGATGCGCCCCGACAGCAAAGTCGAAAAAGTCTAC > NC_002947/4541071‑4541316 | gTACCCTGCTGCTGTACCCCATCGACCTGGTACGCGCCAGTGGCGTGGCGCGCAGCATGAACTTCGTCAGCAACATCGCGGCGCTGACGGTTTTCATCATTTCCGGGCAGGTGGACTATATCGTTGTAAGGGATcc > 1:142077/1‑136 (MQ=255) gTACCCTGCTGCTGTACCCCATCGACCTGGTACGCGCCAGCGGCGTGGCGCGCAGCATGAACTTCGTCAGCAACATCGCGGCGCTGACGGTTTTCATCATTTCCGGGCAGGTGGACTATATCGTTGTAAGGGATcc > 1:27925/1‑136 (MQ=255) gctgctgTACCCCATCGACCTGGTACGCGCCAGCGGCGTGGCGCGCAGCATGAACTTCGTCAGCAACATCGCGGCGCTGACGGTTTTCATCATTTCCGGGCAGGTGGACTATATCGTTGTAAGGGATCCATCATcc < 1:118725/136‑1 (MQ=255) gctgctgTACCCCATCGACCTGGTACGCGCCAGCGGCGTGGCGCGCAGCATGAACTTCGTCAGCAACATCGCGGCGCTGACGGTTTTCATCATTTCCGGGCAGGTGGACTATATCGTTGTAAGGGATCCATCATcc < 2:69992/136‑1 (MQ=255) tgctgTACCCCATCGACCTGGTACGCGCCAGCGGCGTGGCGCGCAGCATGAACTTCGTCAGCAACATCGCGGCGCTGACGGTTTTCATCATTTCCGGGCAGGTGGACTATATCGTTGTAAGGGATCCATCATcccc > 2:256127/1‑136 (MQ=255) tACCCCATCGACCTGGTACGCGCCAGCGGCGTGGCGCGCAGCATGAACTTCGTCAGCAACATCGCGGCGCTGACGGTTTTCATCATTTCCGGGCAGGTGGACTATATCGTTGTAAGGGATCCATCATCCCCACAtt > 2:123385/1‑136 (MQ=255) tACCCCATCGACCTGGTACGCGCCAGCGGCGTGGCGCGCAGCATGAACTTCGTCAGCAACATCGCGGCGCTGACGGTTTTCATCATTTCCGGGCAGGTGGACTATATCGTTGTAAGGGATCCATCATCCCCACAtt > 2:259435/1‑136 (MQ=255) cccATCGACCTGGTACGCGCCAGCGGCGTGGCGCGCAGCATGAACTTCGTCAGCAACATCGCGGCGCTGACGGTTTTTATCATTTCCGGGCAGGTGGACTATATCGTTGTAAGGGATCCATCATCCCCACATTCCa > 2:215699/1‑136 (MQ=255) cTGGTACGCGCCAGCGGCGTGGCGCGCAGCATGAACTTCGTCAGCAACATCGCGGCGCTGACGGTTTTCATCATTTCCGGGCAGGTGGACTATATCGTTGTAAGGGATCCATCATCCCCACATTCCAACCGTCCAc < 2:83765/136‑1 (MQ=255) tGGTACGCGCCAGCGGCGTGGCGCGCAGCATGAACTTCGTCAGCAACATCGCGGCGCTGACGGTTTTCATCATTTCCGGGCAGGTGGACTATATCGTTGTAAGGGATCCATCATCCCCACATTCCAACCGTCCAcc > 1:112366/1‑136 (MQ=255) cgcgcAGCATGAACTTCGTCAGCAACATCGCGGCGCTGACGGTTTTCATCATTTCCGGGCAGGTGGACTATATCGTTGTAAGGGATCCATCATCCCCACATTCCAACCGTCCACCTGATTCCCGATGCTGTGCTcc > 1:22800/1‑136 (MQ=255) tttCCGGGCAGGTGGACTATATCGTTGTAAGGGATCCATCATCCCCACATTCCAACCGTCCACCTGATTCCCGATGCTGTGCTCCCGATTTCTTTCTGGAGCCAGCCCGCCATGATGCGCCCCGACAGCAAAGTCg < 2:22800/136‑1 (MQ=255) gggCAGGTGGACTATATCGTTGTAAGGGATCCATCATCCCCACATTCCAACCGTCCACCTGATTCCCGATGCTGTGCTCCCGATTTCTTTCTGGAGCCAGCCCGCCATGATGCGCCCCGACAGCAAAGTCGaaaaa < 1:144931/136‑1 (MQ=255) gggCAGGTGGACTATATCGTTGTAAGGGATCCATCATCCCCACATTCCAACCGTCCACCTGATTCCCGATGCTGTGCTCCCGATTTCTTTCTGGAGCCAGCCCGCCATGATGCGCCCCGACAGCAAAGTCGaaaaa < 1:307672/136‑1 (MQ=255) gTGGACTATATCGTTGTAAGGGATCCATCATCCCCACATTCCAACCGTCCACCTGATTCCCGATGCTGTGCTCCCGATTTCTTTCTGGAGCCAGCCCGCCATGATGCGCCCCGACAGCAAAGTCGAAAAAGtctac < 1:13675/136‑1 (MQ=255) | GTACCCTGCTGCTGTACCCCATCGACCTGGTACGCGCCAGCGGCGTGGCGCGCAGCATGAACTTCGTCAGCAACATCGCGGCGCTGACGGTTTTCATCATTTCCGGGCAGGTGGACTATATCGTTGTAAGGGATCCATCATCCCCACATTCCAACCGTCCACCTGATTCCCGATGCTGTGCTCCCGATTTCTTTCTGGAGCCAGCCCGCCATGATGCGCCCCGACAGCAAAGTCGAAAAAGTCTAC > NC_002947/4541071‑4541316 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |