New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1015848 | 0 (0.000) | 11 (0.800) | 9/264 | 0.3 | 100% | intergenic (‑75/‑693) | SBRG_Ecoli_galE/prfC | SBRG_Ecoli_galE/peptide chain release factor 3 |
? | NC_002947 | = 4543236 | NA (NA) | intergenic (+45/‑275) | PP_4025/PP_4027 | transposase/hypothetical protein |
CGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGCGCACGCACGGCGATCAGTG > NC_002947/4543172‑4543308 | cGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGCGCACGCACGGCGATCAGt > 2:360055/1‑136 (MQ=255) gCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGCGCACGCACGGCGATCAGTg < 1:229060/136‑1 (MQ=255) gCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGCGCACGCACGGCGATCAGTg > 2:232997/1‑136 (MQ=255) | CGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGCGCACGCACGGCGATCAGTG > NC_002947/4543172‑4543308 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |