Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4482106	4482159	54	3 [1]	[0] 2	PP_3968	sensor histidine kinase

TTCTGCCGCGTAGCTTGAATATCTGCCCTCTGGCTTGAACAGATAGGGCATCACATCGCTGGGAATCGGCTCTCCGGAATTGTGCACGCTGAAGCGCGGAACTCCGGCTTCGCTGAAGAAAGTGACCTGGATCGGTAGCGTCGAGTCA  >  NC_002947/4481998‑4482145                                                                                                            |                                         ttctGCCGCGTAGCTTGAATATCTGCCCTCTGGCTTGAACAGATAGGGCATCACATCGCTGGGAATCGGCTCTCCGGAATTGTGCACGCTGAAGCGCGGAACTCCGGc                                          >  1:32030/1‑108 (MQ=255) ttctGCCGCGTAGCTTGAATATCTGCCCTCTGGCTTGAACAGATAGGGCATCACATCGCTGGGAATCGGCTCTCCGGAATTGTGCACGCTGAAGCGCGGAACTCCGGc                                          <  2:32030/108‑1 (MQ=255)             gCTTGAATATCTGCCCTCTGGCTTGAACAGATAGGGCATCACATCGCTGGGAATCGGCTCTCCGGAATTGTGCACGCTGAAGCGCGGAACTCCGGCTTCGCTGAAGAAAGTGACCTGGATCGGTAGCGTCGAGTCa  <  1:76823/136‑1 (MQ=255)                                                                                                            |                                         TTCTGCCGCGTAGCTTGAATATCTGCCCTCTGGCTTGAACAGATAGGGCATCACATCGCTGGGAATCGGCTCTCCGGAATTGTGCACGCTGAAGCGCGGAACTCCGGCTTCGCTGAAGAAAGTGACCTGGATCGGTAGCGTCGAGTCA  >  NC_002947/4481998‑4482145

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑