Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4987995	4988023	29	3 [0]	[1] 4	flgC	flagellar basal‑body rod protein FlgC

CTCGTAGCGTGCTTCAAGGGTGCTCTGGTCTTCGACGATGCCTTTTACCTGCACGCCCTGCCCTGCCTCGCCCTGGTCTTCGAACAGCGACTGGCTGCTACCGGCCTGCGCATTCTGGAAGGTGGTGGCGAACACC  >  NC_002947/4987859‑4987994                                                                                                                                        | cTCGTAGCGTGCTTCAAGGGTGCTCTGGTCTTCGACGATGCCTTTTACCTGCACGCCCTGCCCTGCCTCGCCCTGGTCTTCGAACAGCGACTGGCTGCTACCGGCCTGCGCATTCTGGAAGGTGGTGGCGAACAcc  >  2:328376/1‑136 (MQ=255) cTCGTAGCGTGCTTCAAGGGTGCTCTGGTCTTCGACGATGCCTTTTACCTGCACGCCCTGCCCTGCCTCGCCCTGGTCTTCGAACAGCGACTGGCTGCTACCGGCCTGCGCATTCTGGAAGGTGGTGGCGAACAcc  >  2:71662/1‑136 (MQ=255) cTCGTAGCGTGCTTCAAGGGTGCTCTGGTCTTCGACGATGCCTTTTACATGCACGCCCTGCCCTGCCTCGCCCTGGTCTTCGAACAGCGACTGTCTGCTACCGGCCTGCGCATTCTGGAAGGTGGTGGCGAACAcc  >  2:201932/1‑136 (MQ=255)                                                                                                                                        | CTCGTAGCGTGCTTCAAGGGTGCTCTGGTCTTCGACGATGCCTTTTACCTGCACGCCCTGCCCTGCCTCGCCCTGGTCTTCGAACAGCGACTGGCTGCTACCGGCCTGCGCATTCTGGAAGGTGGTGGCGAACACC  >  NC_002947/4987859‑4987994

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑