Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_002947 4972932 4973014 83 2 [1] [1] 2 PP_4377 flagellin FlaG

TCTGGTAGCTCAGCATTCGATCTGCTCGATGGCTGTGCACTCCTGGCTTCTTGAGTGGCGGGCGCAGAGAGAACAGAGTTCAGCTTGACACTCATATCCATGATGCTTGCCTCGTAGAATCAGAAAACGAAAGGGTACGTTGCCGCACCCTT  >  NC_002947/4972998‑4973149
                 |                                                                                                                                      
tCTGGTAGCTCAGCACTCGATCTGCTCGATGGCTGTGCACTCCTGGCTTCTTGAGTGGCGGGCGCAGAGAGAACAGAGTTCAGCTTGACACTCATATCCATGATGCTTGCCTCGTAGAATCAGAAAACGAAAGGGt                  <  2:257839/136‑1 (MQ=255)
                gcGATCTGCTCGATGGCTGTGCACTCCTGGCTTCTTGAGTGGCGGGCGCAGAGAGAACAGAGTTCAGCTTGACACTCATATCCATGATGCTTGCCTCGTAGAATCAGAAAACGAAAGGGTACGTTGCCGCACCCtt  <  1:12108/135‑1 (MQ=255)
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TCTGGTAGCTCAGCATTCGATCTGCTCGATGGCTGTGCACTCCTGGCTTCTTGAGTGGCGGGCGCAGAGAGAACAGAGTTCAGCTTGACACTCATATCCATGATGCTTGCCTCGTAGAATCAGAAAACGAAAGGGTACGTTGCCGCACCCTT  >  NC_002947/4972998‑4973149

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: