Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4986635	4986758	124	3 [1]	[1] 2	flgE	flagellar hook protein FlgE

GCGTTGATATTGCCTGGCGTGAACAGCTGCGACACCGCGGCAGTCTTTACCCCGGTGCCGATCACGGTCTTGCCCGCGCTGGTGCCGCGAATGGAGTTGGAGTACTGGTCGGCGAACTCGGCACGCGACGACTTGAAGCCGGTGGTGGCAACGTTGGCAATGTTGTTGCCGGTAAC  >  NC_002947/4986719‑4986894                                         |                                                                                                                                        gCGTTGATATTGCCTGGCGTGAACAGCTGCGACACCGCGGCAGTCTTTACCCCGGTGCCGATCACGGTCTTGCCCGCGCTGGTGCCGCGAATGGAGTTGGAGTACTGGTCGGCGAACTCGGCACGCGACGACTTGa                                          >  1:291374/1‑136 (MQ=255)                                         cAGTCTTTACCCCGGTGCCGATCACGGTCTTGCCCGCGCTGGTGCCGCGAATGGAGTTGGAGTACTGGTCGGCGAACTCGGCACGCGACGACTTGAAGCCGGTGGTGGCAACGTTGGCAATGTTGTTGCCGGTAAc  >  1:28217/1‑136 (MQ=255)                                         |                                                                                                                                        GCGTTGATATTGCCTGGCGTGAACAGCTGCGACACCGCGGCAGTCTTTACCCCGGTGCCGATCACGGTCTTGCCCGCGCTGGTGCCGCGAATGGAGTTGGAGTACTGGTCGGCGAACTCGGCACGCGACGACTTGAAGCCGGTGGTGGCAACGTTGGCAATGTTGTTGCCGGTAAC  >  NC_002947/4986719‑4986894

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑