Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	5989445	5989453	9	2 [0]	[0] 2	PP_5242/ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase

TGTAGGGGCGGGTTTACCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGA  >  NC_002947/5989454‑5989506 |                                                     tGTAGGGGCGGGTTTACCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGa  >  1:200046/1‑53 (MQ=255) tGTAGGGGCGGGTTTACCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGa  <  2:200046/53‑1 (MQ=255) |                                                     TGTAGGGGCGGGTTTACCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGA  >  NC_002947/5989454‑5989506

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑